RNA–Protein interactions for RNA: ENST00000518451.1

HOXA3-203, Transcript of homeobox A3, humanhuman

TSL 4

Gene HOXA3, Length 541 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA3-203ENST00000518451 FAM83GA6ND36 823 aa26.41■■□□□ 1.82
HOXA3-203ENST00000518451 TRPM3Q9HCF6 1732 aaPredicted RBP26.39■■□□□ 1.82
HOXA3-203ENST00000518451 VPS72Q15906 364 aa26.39■■□□□ 1.82
HOXA3-203ENST00000518451 CARD11Q9BXL7 1154 aa26.39■■□□□ 1.82
HOXA3-203ENST00000518451 PPIP5K1Q6PFW1 1433 aa26.39■■□□□ 1.81
HOXA3-203ENST00000518451 CABP1Q9NZU7 370 aa26.37■■□□□ 1.81
HOXA3-203ENST00000518451 CCDC9Q9Y3X0 531 aaKnown RBP26.37■■□□□ 1.81
HOXA3-203ENST00000518451 BRD4O60885 1362 aaPredicted RBP26.36■■□□□ 1.81
HOXA3-203ENST00000518451 ABTB2Q8N961 1025 aa26.36■■□□□ 1.81
HOXA3-203ENST00000518451 ALS2Q96Q42 1657 aa26.35■■□□□ 1.81
HOXA3-203ENST00000518451 ATAD2Q6PL18 1390 aa26.34■■□□□ 1.81
HOXA3-203ENST00000518451 BTG4Q9NY30 223 aa26.34■■□□□ 1.81
HOXA3-203ENST00000518451 QRICH2Q9H0J4 1663 aa26.34■■□□□ 1.81
HOXA3-203ENST00000518451 PRDM11Q9NQV5 511 aa26.33■■□□□ 1.81
HOXA3-203ENST00000518451 TNKS1BP1Q9C0C2 1729 aaKnown RBP26.33■■□□□ 1.81
HOXA3-203ENST00000518451 RALGAPBQ86X10 1494 aa26.32■■□□□ 1.8
HOXA3-203ENST00000518451 NUTM2GQ5VZR2 741 aa26.32■■□□□ 1.8
HOXA3-203ENST00000518451 NLRP13Q86W25 1043 aa26.32■■□□□ 1.8
HOXA3-203ENST00000518451 TOPAZ1Q8N9V7 1692 aa26.31■■□□□ 1.8
HOXA3-203ENST00000518451 ZNF692Q9BU19 519 aaPredicted RBP26.31■■□□□ 1.8
HOXA3-203ENST00000518451 ABCA3Q99758 1704 aa26.28■■□□□ 1.8
HOXA3-203ENST00000518451 ONECUT3O60422 494 aaPredicted RBP26.28■■□□□ 1.8
HOXA3-203ENST00000518451 NWD2Q9ULI1 1742 aa26.28■■□□□ 1.8
HOXA3-203ENST00000518451 SBNO2Q9Y2G9 1366 aa26.27■■□□□ 1.8
HOXA3-203ENST00000518451 ZC3H6P61129 1189 aaKnown RBP26.26■■□□□ 1.79
HOXA3-203ENST00000518451 CCDC125Q86Z20 511 aa26.26■■□□□ 1.79
HOXA3-203ENST00000518451 KIAA0232Q92628 1395 aa26.25■■□□□ 1.79
HOXA3-203ENST00000518451 SLC24A1O60721 1099 aa26.25■■□□□ 1.79
HOXA3-203ENST00000518451 SEPT12Q8IYM1 358 aa26.25■■□□□ 1.79
HOXA3-203ENST00000518451 COL14A1Q05707 1796 aaKnown RBP26.24■■□□□ 1.79
HOXA3-203ENST00000518451 USP6P35125 1406 aa26.23■■□□□ 1.79
HOXA3-203ENST00000518451 PLCH1Q4KWH8 1693 aa26.23■■□□□ 1.79
HOXA3-203ENST00000518451 NLRP6P59044 892 aa26.23■■□□□ 1.79
HOXA3-203ENST00000518451 USP19O94966 1318 aa26.22■■□□□ 1.79
HOXA3-203ENST00000518451 GLI3P10071 1580 aa26.22■■□□□ 1.79
HOXA3-203ENST00000518451 GCP02774 474 aa26.22■■□□□ 1.79
HOXA3-203ENST00000518451 CHRNA2Q15822 529 aa26.21■■□□□ 1.79
HOXA3-203ENST00000518451 TIMELESSQ9UNS1 1208 aa26.21■■□□□ 1.79
HOXA3-203ENST00000518451 CLSPNQ9HAW4 1339 aa26.2■■□□□ 1.79
HOXA3-203ENST00000518451 A0A0G2JS52 829 aa26.2■■□□□ 1.78
HOXA3-203ENST00000518451 EVA1CP58658 441 aa26.2■■□□□ 1.78
HOXA3-203ENST00000518451 MYT1Q01538 1121 aa26.2■■□□□ 1.78
HOXA3-203ENST00000518451 PCGF6Q9BYE7 350 aa26.2■■□□□ 1.78
HOXA3-203ENST00000518451 SPATA31A5Q5VU36 1347 aa26.19■■□□□ 1.78
HOXA3-203ENST00000518451 SPATA31A7Q8IWB4 1347 aa26.19■■□□□ 1.78
HOXA3-203ENST00000518451 PUS7Q96PZ0 661 aaKnown RBP26.19■■□□□ 1.78
HOXA3-203ENST00000518451 CPDO75976 1380 aa26.19■■□□□ 1.78
HOXA3-203ENST00000518451 FAM98CQ17RN3 349 aaKnown RBP26.18■■□□□ 1.78
HOXA3-203ENST00000518451 CRYBG1Q9Y4K1 1723 aa26.17■■□□□ 1.78
HOXA3-203ENST00000518451 KRT27Q7Z3Y8 459 aa26.17■■□□□ 1.78
HOXA3-203ENST00000518451 STRN4Q9NRL3 753 aa26.17■■□□□ 1.78
HOXA3-203ENST00000518451 TTC21AQ8NDW8 1320 aa26.16■■□□□ 1.78
HOXA3-203ENST00000518451 TTC21BQ7Z4L5 1316 aa26.15■■□□□ 1.78
HOXA3-203ENST00000518451 SSH2Q76I76 1423 aa26.15■■□□□ 1.78
HOXA3-203ENST00000518451 TMC1Q8TDI8 760 aa26.14■■□□□ 1.78
HOXA3-203ENST00000518451 KTN1Q86UP2 1357 aaKnown RBP26.14■■□□□ 1.78
HOXA3-203ENST00000518451 ST20-MTHFSA0A0A6YYL1 179 aa26.13■■□□□ 1.77
HOXA3-203ENST00000518451 KCNH5Q8NCM2 988 aa26.13■■□□□ 1.77
HOXA3-203ENST00000518451 PHRF1Q9P1Y6 1649 aaKnown RBP26.13■■□□□ 1.77
HOXA3-203ENST00000518451 CPSF1Q10570 1443 aaKnown RBP26.13■■□□□ 1.77
HOXA3-203ENST00000518451 HDGFL2Q7Z4V5 671 aaPredicted RBP26.12■■□□□ 1.77
HOXA3-203ENST00000518451 SPATA31A1Q5TZJ5 1347 aa26.12■■□□□ 1.77
HOXA3-203ENST00000518451 NRAPQ86VF7 1730 aa26.11■■□□□ 1.77
HOXA3-203ENST00000518451 TERF2IPQ9NYB0 399 aa26.11■■□□□ 1.77
HOXA3-203ENST00000518451 SF3B2Q13435 895 aaKnown RBP26.1■■□□□ 1.77
HOXA3-203ENST00000518451 NRKQ7Z2Y5 1582 aa26.08■■□□□ 1.77
HOXA3-203ENST00000518451 ZBTB7CA1YPR0 619 aa26.08■■□□□ 1.77
HOXA3-203ENST00000518451 TESK2Q96S53 571 aa26.08■■□□□ 1.77
HOXA3-203ENST00000518451 SLC12A5Q9H2X9 1139 aa26.07■■□□□ 1.76
HOXA3-203ENST00000518451 BLMP54132 1417 aaPredicted RBP26.06■■□□□ 1.76
HOXA3-203ENST00000518451 USP35Q9P2H5 1018 aa26.06■■□□□ 1.76
HOXA3-203ENST00000518451 AATKQ6ZMQ8 1374 aa26.06■■□□□ 1.76
HOXA3-203ENST00000518451 LARP1Q6PKG0 1096 aaKnown RBP26.05■■□□□ 1.76
HOXA3-203ENST00000518451 BARGINQ6ZT62 677 aa26.05■■□□□ 1.76
HOXA3-203ENST00000518451 THRAP3Q9Y2W1 955 aaKnown RBP26.05■■□□□ 1.76
HOXA3-203ENST00000518451 CAMTA1Q9Y6Y1 1673 aa26.04■■□□□ 1.76
HOXA3-203ENST00000518451 SUGP2Q8IX01 1082 aaKnown RBP eCLIP26.04■■□□□ 1.76
HOXA3-203ENST00000518451 TCP11L2Q8N4U5 519 aa26.04■■□□□ 1.76
HOXA3-203ENST00000518451 TMF1P82094 1093 aa26.03■■□□□ 1.76
HOXA3-203ENST00000518451 NINLQ9Y2I6 1382 aa26.03■■□□□ 1.76
HOXA3-203ENST00000518451 SLIT3O75094 1523 aa26.03■■□□□ 1.76
HOXA3-203ENST00000518451 ARHGEF25Q86VW2 580 aa26.02■■□□□ 1.76
HOXA3-203ENST00000518451 BRWD3Q6RI45 1802 aa26■■□□□ 1.75
HOXA3-203ENST00000518451 AKAP12Q02952 1782 aa26■■□□□ 1.75
HOXA3-203ENST00000518451 USP47Q96K76 1375 aa26■■□□□ 1.75
HOXA3-203ENST00000518451 CDCA8Q53HL2 280 aa26■■□□□ 1.75
HOXA3-203ENST00000518451 CCER1Q8TC90 406 aaPredicted RBP26■■□□□ 1.75
HOXA3-203ENST00000518451 PIK3C2AO00443 1686 aa25.99■■□□□ 1.75
HOXA3-203ENST00000518451 EP400Q96L91 3159 aa25.99■■□□□ 1.75
HOXA3-203ENST00000518451 USP31Q70CQ4 1352 aa25.99■■□□□ 1.75
HOXA3-203ENST00000518451 SOX12O15370 315 aa25.99■■□□□ 1.75
HOXA3-203ENST00000518451 ZRANB1Q9UGI0 708 aa25.99■■□□□ 1.75
HOXA3-203ENST00000518451 PDE3BQ13370 1112 aa25.98■■□□□ 1.75
HOXA3-203ENST00000518451 COL5A2P05997 1499 aaPredicted RBP25.98■■□□□ 1.75
HOXA3-203ENST00000518451 EDC4Q6P2E9 1401 aaKnown RBP25.97■■□□□ 1.75
HOXA3-203ENST00000518451 LMO7Q8WWI1 1683 aa25.97■■□□□ 1.75
HOXA3-203ENST00000518451 CD163L1Q9NR16 1453 aa25.97■■□□□ 1.75
HOXA3-203ENST00000518451 FAM196AQ6ZSG2 479 aa25.96■■□□□ 1.75
HOXA3-203ENST00000518451 TOM1L2Q6ZVM7 507 aa25.96■■□□□ 1.75
HOXA3-203ENST00000518451 NME9Q86XW9 330 aa25.96■■□□□ 1.75
Retrieved 100 of 20,778 RNA–protein pairs in 40.8 ms