RNA–Protein interactions for RNA: ENST00000518423.1

IGKV2D-38-201, Transcript of immunoglobulin kappa variable 2D-38 (pseudogene), humanhuman

BASIC

Gene IGKV2D-38, Length 240 nt, Biotype IG V pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IGKV2D-38-201ENST00000518423 ACEP12821 1306 aa9.65□□□□□ -0.86
IGKV2D-38-201ENST00000518423 SPATA31A3Q5VYP0 1347 aa9.65□□□□□ -0.86
IGKV2D-38-201ENST00000518423 SOX12O15370 315 aa9.65□□□□□ -0.86
IGKV2D-38-201ENST00000518423 ZNF772Q68DY9 489 aaPredicted RBP9.65□□□□□ -0.86
IGKV2D-38-201ENST00000518423 USP21Q9UK80 565 aa9.65□□□□□ -0.86
IGKV2D-38-201ENST00000518423 PLCH1Q4KWH8 1693 aa9.64□□□□□ -0.87
IGKV2D-38-201ENST00000518423 ARHGEF10O15013 1369 aa9.64□□□□□ -0.87
IGKV2D-38-201ENST00000518423 RGS17Q9UGC6 210 aaPredicted RBP9.64□□□□□ -0.87
IGKV2D-38-201ENST00000518423 CABP1Q9NZU7 370 aa9.63□□□□□ -0.87
IGKV2D-38-201ENST00000518423 CCDC61Q9Y6R9 512 aa9.63□□□□□ -0.87
IGKV2D-38-201ENST00000518423 ALS2Q96Q42 1657 aa9.63□□□□□ -0.87
IGKV2D-38-201ENST00000518423 PHRF1Q9P1Y6 1649 aaKnown RBP9.63□□□□□ -0.87
IGKV2D-38-201ENST00000518423 SBNO1A3KN83 1393 aa9.63□□□□□ -0.87
IGKV2D-38-201ENST00000518423 USP47Q96K76 1375 aa9.63□□□□□ -0.87
IGKV2D-38-201ENST00000518423 ABTB2Q8N961 1025 aa9.62□□□□□ -0.87
IGKV2D-38-201ENST00000518423 ST20-MTHFSA0A0A6YYL1 179 aa9.61□□□□□ -0.87
IGKV2D-38-201ENST00000518423 RXRBP28702 533 aa9.61□□□□□ -0.87
IGKV2D-38-201ENST00000518423 QTRT2Q9H974 415 aaKnown RBP9.61□□□□□ -0.87
IGKV2D-38-201ENST00000518423 SOCS7O14512 581 aa9.6□□□□□ -0.87
IGKV2D-38-201ENST00000518423 ZC3H6P61129 1189 aaKnown RBP9.6□□□□□ -0.87
IGKV2D-38-201ENST00000518423 SUGP2Q8IX01 1082 aaKnown RBP eCLIP9.6□□□□□ -0.87
IGKV2D-38-201ENST00000518423 PRDM11Q9NQV5 511 aa9.6□□□□□ -0.87
IGKV2D-38-201ENST00000518423 STRN4Q9NRL3 753 aa9.6□□□□□ -0.87
IGKV2D-38-201ENST00000518423 ATAD2Q6PL18 1390 aa9.6□□□□□ -0.87
IGKV2D-38-201ENST00000518423 KTN1Q86UP2 1357 aaKnown RBP9.6□□□□□ -0.87
IGKV2D-38-201ENST00000518423 AKAP12Q02952 1782 aa9.6□□□□□ -0.87
IGKV2D-38-201ENST00000518423 CHRNA2Q15822 529 aa9.59□□□□□ -0.87
IGKV2D-38-201ENST00000518423 HDGFL2Q7Z4V5 671 aaPredicted RBP9.59□□□□□ -0.87
IGKV2D-38-201ENST00000518423 TRPC5Q9UL62 973 aaPredicted RBP9.59□□□□□ -0.87
IGKV2D-38-201ENST00000518423 CLSPNQ9HAW4 1339 aa9.58□□□□□ -0.88
IGKV2D-38-201ENST00000518423 COL14A1Q05707 1796 aaKnown RBP9.58□□□□□ -0.88
IGKV2D-38-201ENST00000518423 KCNA4P22459 653 aa9.58□□□□□ -0.88
IGKV2D-38-201ENST00000518423 NLRP6P59044 892 aa9.58□□□□□ -0.88
IGKV2D-38-201ENST00000518423 CRYBG1Q9Y4K1 1723 aa9.58□□□□□ -0.88
IGKV2D-38-201ENST00000518423 NRKQ7Z2Y5 1582 aa9.58□□□□□ -0.88
IGKV2D-38-201ENST00000518423 PIK3C2AO00443 1686 aa9.58□□□□□ -0.88
IGKV2D-38-201ENST00000518423 USP6P35125 1406 aa9.57□□□□□ -0.88
IGKV2D-38-201ENST00000518423 MON2Q7Z3U7 1717 aa9.57□□□□□ -0.88
IGKV2D-38-201ENST00000518423 TMF1P82094 1093 aa9.57□□□□□ -0.88
IGKV2D-38-201ENST00000518423 BTG4Q9NY30 223 aa9.57□□□□□ -0.88
IGKV2D-38-201ENST00000518423 USP35Q9P2H5 1018 aa9.57□□□□□ -0.88
IGKV2D-38-201ENST00000518423 POLR3AO14802 1390 aaPredicted RBP9.57□□□□□ -0.88
IGKV2D-38-201ENST00000518423 KIAA0232Q92628 1395 aa9.57□□□□□ -0.88
IGKV2D-38-201ENST00000518423 RGS12O14924 1447 aa9.56□□□□□ -0.88
IGKV2D-38-201ENST00000518423 PLEKHG3A1L390 1219 aa9.56□□□□□ -0.88
IGKV2D-38-201ENST00000518423 EVA1CP58658 441 aa9.56□□□□□ -0.88
IGKV2D-38-201ENST00000518423 RBM6P78332 1123 aaKnown RBP9.56□□□□□ -0.88
IGKV2D-38-201ENST00000518423 TNKS1BP1Q9C0C2 1729 aaKnown RBP9.56□□□□□ -0.88
IGKV2D-38-201ENST00000518423 NWD2Q9ULI1 1742 aa9.56□□□□□ -0.88
IGKV2D-38-201ENST00000518423 NLRP13Q86W25 1043 aa9.55□□□□□ -0.88
IGKV2D-38-201ENST00000518423 SLC12A5Q9H2X9 1139 aa9.55□□□□□ -0.88
IGKV2D-38-201ENST00000518423 NRAPQ86VF7 1730 aa9.55□□□□□ -0.88
IGKV2D-38-201ENST00000518423 FAM83GA6ND36 823 aa9.54□□□□□ -0.88
IGKV2D-38-201ENST00000518423 UNC5CLQ8IV45 518 aa9.54□□□□□ -0.88
IGKV2D-38-201ENST00000518423 TERF2IPQ9NYB0 399 aa9.54□□□□□ -0.88
IGKV2D-38-201ENST00000518423 ATRNO75882 1429 aa9.54□□□□□ -0.88
IGKV2D-38-201ENST00000518423 TTC21BQ7Z4L5 1316 aa9.54□□□□□ -0.88
IGKV2D-38-201ENST00000518423 BCL9LQ86UU0 1499 aa9.53□□□□□ -0.88
IGKV2D-38-201ENST00000518423 A0A1W2PP64 1363 aa9.53□□□□□ -0.88
IGKV2D-38-201ENST00000518423 SBNO2Q9Y2G9 1366 aa9.53□□□□□ -0.88
IGKV2D-38-201ENST00000518423 CSB-PGBD3P0DP91 1061 aa9.53□□□□□ -0.88
IGKV2D-38-201ENST00000518423 HSPA5P11021 654 aaKnown RBP9.53□□□□□ -0.88
IGKV2D-38-201ENST00000518423 NME9Q86XW9 330 aa9.53□□□□□ -0.88
IGKV2D-38-201ENST00000518423 RNF216Q9NWF9 866 aaPredicted RBP9.53□□□□□ -0.88
IGKV2D-38-201ENST00000518423 ZRANB1Q9UGI0 708 aa9.53□□□□□ -0.88
IGKV2D-38-201ENST00000518423 TIMELESSQ9UNS1 1208 aa9.53□□□□□ -0.88
IGKV2D-38-201ENST00000518423 GLI3P10071 1580 aa9.53□□□□□ -0.88
IGKV2D-38-201ENST00000518423 SLIT2O94813 1529 aa9.52□□□□□ -0.88
IGKV2D-38-201ENST00000518423 KIF20BQ96Q89 1820 aa9.52□□□□□ -0.89
IGKV2D-38-201ENST00000518423 HOXD11P31277 338 aaPredicted RBP9.52□□□□□ -0.89
IGKV2D-38-201ENST00000518423 EIF4G2P78344 907 aaKnown RBP eCLIP9.52□□□□□ -0.89
IGKV2D-38-201ENST00000518423 CNGB1Q14028 1251 aaPredicted RBP9.52□□□□□ -0.89
IGKV2D-38-201ENST00000518423 FAM98CQ17RN3 349 aaKnown RBP9.52□□□□□ -0.89
IGKV2D-38-201ENST00000518423 FNBP4Q8N3X1 1017 aaPredicted RBP9.52□□□□□ -0.89
IGKV2D-38-201ENST00000518423 GJD4Q96KN9 370 aaPredicted RBP9.52□□□□□ -0.89
IGKV2D-38-201ENST00000518423 ZNF692Q9BU19 519 aaPredicted RBP9.52□□□□□ -0.89
IGKV2D-38-201ENST00000518423 LTN1O94822 1766 aa9.51□□□□□ -0.89
IGKV2D-38-201ENST00000518423 NPM3O75607 178 aaKnown RBP9.51□□□□□ -0.89
IGKV2D-38-201ENST00000518423 CDCA8Q53HL2 280 aa9.51□□□□□ -0.89
IGKV2D-38-201ENST00000518423 TESK2Q96S53 571 aa9.51□□□□□ -0.89
IGKV2D-38-201ENST00000518423 MYOM1P52179 1685 aa9.51□□□□□ -0.89
IGKV2D-38-201ENST00000518423 TTC21AQ8NDW8 1320 aa9.51□□□□□ -0.89
IGKV2D-38-201ENST00000518423 RGPD5Q99666 1765 aa9.5□□□□□ -0.89
IGKV2D-38-201ENST00000518423 BRWD3Q6RI45 1802 aa9.5□□□□□ -0.89
IGKV2D-38-201ENST00000518423 GCP02774 474 aa9.5□□□□□ -0.89
IGKV2D-38-201ENST00000518423 EDC4Q6P2E9 1401 aaKnown RBP9.49□□□□□ -0.89
IGKV2D-38-201ENST00000518423 CD163L1Q9NR16 1453 aa9.49□□□□□ -0.89
IGKV2D-38-201ENST00000518423 CDK12Q9NYV4 1490 aaPredicted RBP9.49□□□□□ -0.89
IGKV2D-38-201ENST00000518423 VPS72Q15906 364 aa9.49□□□□□ -0.89
IGKV2D-38-201ENST00000518423 TOM1L2Q6ZVM7 507 aa9.49□□□□□ -0.89
IGKV2D-38-201ENST00000518423 SEPT12Q8IYM1 358 aa9.49□□□□□ -0.89
IGKV2D-38-201ENST00000518423 LTV1Q96GA3 475 aaPredicted RBP9.49□□□□□ -0.89
IGKV2D-38-201ENST00000518423 SLIT3O75094 1523 aa9.49□□□□□ -0.89
IGKV2D-38-201ENST00000518423 USP19O94966 1318 aa9.49□□□□□ -0.89
IGKV2D-38-201ENST00000518423 BRD4O60885 1362 aaPredicted RBP9.49□□□□□ -0.89
IGKV2D-38-201ENST00000518423 CPSF1Q10570 1443 aaKnown RBP9.48□□□□□ -0.89
IGKV2D-38-201ENST00000518423 SSH2Q76I76 1423 aa9.48□□□□□ -0.89
IGKV2D-38-201ENST00000518423 NSD3Q9BZ95 1437 aa9.48□□□□□ -0.89
IGKV2D-38-201ENST00000518423 SLC24A1O60721 1099 aa9.48□□□□□ -0.89
IGKV2D-38-201ENST00000518423 FAM182BQ5T319 152 aa9.48□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms