RNA–Protein interactions for RNA: ENST00000518209.1

CDH12-204, Transcript of cadherin 12, humanhuman

TSL 3

Gene CDH12, Length 666 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH12-204ENST00000518209 SYMPKQ92797 1274 aaKnown RBP8.02□□□□□ -1.13
CDH12-204ENST00000518209 KRTAP4-8Q9BYQ9 185 aa8.01□□□□□ -1.13
CDH12-204ENST00000518209 SPDYE5A6NIY4 337 aa8□□□□□ -1.13
CDH12-204ENST00000518209 DXOO77932 396 aaKnown RBP8□□□□□ -1.13
CDH12-204ENST00000518209 RSBN1LQ6PCB5 846 aaPredicted RBP8□□□□□ -1.13
CDH12-204ENST00000518209 RIC3Q7Z5B4 369 aa8□□□□□ -1.13
CDH12-204ENST00000518209 SPTLC1O15269 473 aa7.99□□□□□ -1.13
CDH12-204ENST00000518209 MTMR2Q13614 643 aa7.99□□□□□ -1.13
CDH12-204ENST00000518209 TRIM46Q7Z4K8 759 aa7.99□□□□□ -1.13
CDH12-204ENST00000518209 RSPH6AQ9H0K4 717 aa7.99□□□□□ -1.13
CDH12-204ENST00000518209 JUNDP17535 347 aa7.98□□□□□ -1.13
CDH12-204ENST00000518209 KDM4CQ9H3R0 1056 aa7.98□□□□□ -1.13
CDH12-204ENST00000518209 BMP1P13497 986 aa7.97□□□□□ -1.13
CDH12-204ENST00000518209 MYSM1Q5VVJ2 828 aa7.97□□□□□ -1.13
CDH12-204ENST00000518209 GPBP1L1Q9HC44 474 aaPredicted RBP7.97□□□□□ -1.13
CDH12-204ENST00000518209 PCDHB15Q9Y5E8 787 aa7.97□□□□□ -1.13
CDH12-204ENST00000518209 CAPN5O15484 640 aaPredicted RBP7.96□□□□□ -1.14
CDH12-204ENST00000518209 PRPF38BQ5VTL8 546 aaKnown RBP7.96□□□□□ -1.14
CDH12-204ENST00000518209 GPAT2Q6NUI2 795 aa7.96□□□□□ -1.14
CDH12-204ENST00000518209 CCDC24Q8N4L8 307 aa7.96□□□□□ -1.14
CDH12-204ENST00000518209 PRR7Q8TB68 274 aa7.96□□□□□ -1.14
CDH12-204ENST00000518209 DDRGK1Q96HY6 314 aa7.96□□□□□ -1.14
CDH12-204ENST00000518209 DNMT3AQ9Y6K1 912 aaPredicted RBP7.96□□□□□ -1.14
CDH12-204ENST00000518209 TUSC1Q2TAM9 212 aa7.95□□□□□ -1.14
CDH12-204ENST00000518209 RC3H1Q5TC82 1133 aaKnown RBP7.95□□□□□ -1.14
CDH12-204ENST00000518209 ZBTB3Q9H5J0 574 aa7.95□□□□□ -1.14
CDH12-204ENST00000518209 ALDH1A1P00352 501 aa7.94□□□□□ -1.14
CDH12-204ENST00000518209 HRCP23327 699 aa7.94□□□□□ -1.14
CDH12-204ENST00000518209 FOXK2Q01167 660 aa7.94□□□□□ -1.14
CDH12-204ENST00000518209 CSPP1Q1MSJ5 1256 aa7.94□□□□□ -1.14
CDH12-204ENST00000518209 DESI1Q6ICB0 168 aa7.94□□□□□ -1.14
CDH12-204ENST00000518209 WNT7BP56706 349 aa7.93□□□□□ -1.14
CDH12-204ENST00000518209 NUDT12Q9BQG2 462 aa7.93□□□□□ -1.14
CDH12-204ENST00000518209 FAM117AQ9C073 453 aa7.93□□□□□ -1.14
CDH12-204ENST00000518209 LIMD1Q9UGP4 676 aa7.93□□□□□ -1.14
CDH12-204ENST00000518209 TIMELESSQ9UNS1 1208 aa7.93□□□□□ -1.14
CDH12-204ENST00000518209 GTF3C3Q9Y5Q9 886 aa7.93□□□□□ -1.14
CDH12-204ENST00000518209 NUTM2BA6NNL0 878 aaPredicted RBP7.92□□□□□ -1.14
CDH12-204ENST00000518209 NUTM2EB1AL46 878 aaPredicted RBP7.92□□□□□ -1.14
CDH12-204ENST00000518209 CLK2P49760 499 aaKnown RBP7.92□□□□□ -1.14
CDH12-204ENST00000518209 PTPRNQ16849 979 aa7.92□□□□□ -1.14
CDH12-204ENST00000518209 NUTM2DQ5VT03 806 aaPredicted RBP7.92□□□□□ -1.14
CDH12-204ENST00000518209 NUTM2AQ8IVF1 878 aaPredicted RBP7.92□□□□□ -1.14
CDH12-204ENST00000518209 ADAMTS8Q9UP79 889 aa7.92□□□□□ -1.14
CDH12-204ENST00000518209 CCNYL3P0C7X3 344 aa7.91□□□□□ -1.14
CDH12-204ENST00000518209 ZFP42Q96MM3 310 aa7.91□□□□□ -1.14
CDH12-204ENST00000518209 POLR3EQ9NVU0 708 aa7.91□□□□□ -1.14
CDH12-204ENST00000518209 LILRB3O75022 631 aa7.9□□□□□ -1.14
CDH12-204ENST00000518209 SKIV2LQ15477 1246 aaKnown RBP7.9□□□□□ -1.14
CDH12-204ENST00000518209 NEUROD2Q15784 382 aa7.9□□□□□ -1.14
CDH12-204ENST00000518209 CABLES1Q8TDN4 633 aa7.9□□□□□ -1.14
CDH12-204ENST00000518209 EVA1BQ9NVM1 165 aa7.9□□□□□ -1.14
CDH12-204ENST00000518209 CFAP99D6REC4 459 aa7.89□□□□□ -1.15
CDH12-204ENST00000518209 QPCTQ16769 361 aa7.88□□□□□ -1.15
CDH12-204ENST00000518209 SH3D19Q5HYK7 790 aa7.88□□□□□ -1.15
CDH12-204ENST00000518209 LYPD8Q6UX82 237 aa7.88□□□□□ -1.15
CDH12-204ENST00000518209 ATP1B4Q9UN42 357 aaPredicted RBP7.88□□□□□ -1.15
CDH12-204ENST00000518209 WASF2Q9Y6W5 498 aa7.88□□□□□ -1.15
CDH12-204ENST00000518209 PLEKHG3A1L390 1219 aa7.87□□□□□ -1.15
CDH12-204ENST00000518209 KCNH2Q12809 1159 aa7.87□□□□□ -1.15
CDH12-204ENST00000518209 PTCRAQ6ISU1 281 aaPredicted RBP7.87□□□□□ -1.15
CDH12-204ENST00000518209 TSC1Q92574 1164 aa7.87□□□□□ -1.15
CDH12-204ENST00000518209 PSMG3-AS1Q96PY0 264 aa7.87□□□□□ -1.15
CDH12-204ENST00000518209 KRTAP9-1A8MXZ3 250 aaPredicted RBP7.86□□□□□ -1.15
CDH12-204ENST00000518209 SKOR1P84550 965 aa7.86□□□□□ -1.15
CDH12-204ENST00000518209 TMEM132AQ24JP5 1023 aa7.86□□□□□ -1.15
CDH12-204ENST00000518209 RTL5Q5HYW3 569 aaPredicted RBP7.86□□□□□ -1.15
CDH12-204ENST00000518209 KRTAP9-2Q9BYQ4 174 aa7.86□□□□□ -1.15
CDH12-204ENST00000518209 CTHP32929 405 aa7.85□□□□□ -1.15
CDH12-204ENST00000518209 SCARF1Q14162 830 aa7.85□□□□□ -1.15
CDH12-204ENST00000518209 KANK3Q6NY19 840 aa7.85□□□□□ -1.15
CDH12-204ENST00000518209 HELBQ8NG08 1087 aaPredicted RBP7.85□□□□□ -1.15
CDH12-204ENST00000518209 ADAM23O75077 832 aa7.84□□□□□ -1.15
CDH12-204ENST00000518209 BRPF1P55201 1214 aaPredicted RBP7.84□□□□□ -1.15
CDH12-204ENST00000518209 PROCA1Q8NCQ7 364 aaPredicted RBP7.84□□□□□ -1.15
CDH12-204ENST00000518209 UNC93B1Q9H1C4 597 aa7.84□□□□□ -1.15
CDH12-204ENST00000518209 IL27Q8NEV9 243 aa7.83□□□□□ -1.16
CDH12-204ENST00000518209 GNL3Q9BVP2 549 aaKnown RBP eCLIP7.83□□□□□ -1.16
CDH12-204ENST00000518209 GOPCQ9HD26 462 aa7.83□□□□□ -1.16
CDH12-204ENST00000518209 PER1O15534 1290 aaPredicted RBP7.82□□□□□ -1.16
CDH12-204ENST00000518209 SIAH2O43255 324 aa7.82□□□□□ -1.16
CDH12-204ENST00000518209 IRS1P35568 1242 aa7.82□□□□□ -1.16
CDH12-204ENST00000518209 KRTAP9-6A0A140TA67 174 aa7.81□□□□□ -1.16
CDH12-204ENST00000518209 F12P00748 615 aaPredicted RBP7.81□□□□□ -1.16
CDH12-204ENST00000518209 SH3BP2P78314 561 aa7.81□□□□□ -1.16
CDH12-204ENST00000518209 PPP2R2DQ66LE6 453 aa7.81□□□□□ -1.16
CDH12-204ENST00000518209 MRPL14Q6P1L8 145 aaKnown RBP7.81□□□□□ -1.16
CDH12-204ENST00000518209 BAP1Q92560 729 aa7.81□□□□□ -1.16
CDH12-204ENST00000518209 EHBP1Q8NDI1 1231 aa7.8□□□□□ -1.16
CDH12-204ENST00000518209 PCMTD1Q96MG8 357 aaPredicted RBP7.8□□□□□ -1.16
CDH12-204ENST00000518209 CTDSPL2Q05D32 466 aa7.79□□□□□ -1.16
CDH12-204ENST00000518209 LINC01559Q495D7 138 aa7.79□□□□□ -1.16
CDH12-204ENST00000518209 MAP10Q9P2G4 905 aa7.79□□□□□ -1.16
CDH12-204ENST00000518209 ERICH6Q7L0X2 663 aa7.78□□□□□ -1.16
CDH12-204ENST00000518209 ZNF511Q8NB15 262 aa7.78□□□□□ -1.16
CDH12-204ENST00000518209 ARMC2Q8NEN0 867 aa7.78□□□□□ -1.16
CDH12-204ENST00000518209 SOBPA7XYQ1 873 aa7.77□□□□□ -1.17
CDH12-204ENST00000518209 PPFIA3O75145 1194 aa7.77□□□□□ -1.17
CDH12-204ENST00000518209 PURBQ96QR8 312 aaKnown RBP7.77□□□□□ -1.17
CDH12-204ENST00000518209 MAN1A2O60476 641 aa7.76□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms