RNA–Protein interactions for RNA: ENST00000518170.1

EFCAB13-205, Transcript of EF-hand calcium binding domain 13, human

TSL 3

Gene EFCAB13, Length 355 nt, Biotype protein coding, Subcellular localisation Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
EFCAB13-205	ENST00000518170	DENND4B	O75064	1496 aa	Predicted RBP	11.26	□□□□□ -0.61
EFCAB13-205	ENST00000518170		A0A0G2JS52	829 aa		11.26	□□□□□ -0.61
EFCAB13-205	ENST00000518170	CLCN1	P35523	988 aa		11.26	□□□□□ -0.61
EFCAB13-205	ENST00000518170	TEX14	Q8IWB6	1497 aa		11.25	□□□□□ -0.61
EFCAB13-205	ENST00000518170	DNMBP	Q6XZF7	1577 aa		11.25	□□□□□ -0.61
EFCAB13-205	ENST00000518170	KCNC4	Q03721	635 aa		11.25	□□□□□ -0.61
EFCAB13-205	ENST00000518170	CCDC136	Q96JN2	1154 aa		11.25	□□□□□ -0.61
EFCAB13-205	ENST00000518170	GPCPD1	Q9NPB8	672 aa		11.25	□□□□□ -0.61
EFCAB13-205	ENST00000518170	SPATA31E1	Q6ZUB1	1445 aa		11.25	□□□□□ -0.61
EFCAB13-205	ENST00000518170	TRIM66	O15016	1216 aa		11.24	□□□□□ -0.61
EFCAB13-205	ENST00000518170	TTLL12	Q14166	644 aa	Predicted RBP	11.24	□□□□□ -0.61
EFCAB13-205	ENST00000518170	MTR	Q99707	1265 aa		11.24	□□□□□ -0.61
EFCAB13-205	ENST00000518170	PCDHB3	Q9Y5E6	796 aa		11.24	□□□□□ -0.61
EFCAB13-205	ENST00000518170	WASHC2C	Q9Y4E1	1318 aa		11.24	□□□□□ -0.61
EFCAB13-205	ENST00000518170	RPRD2	Q5VT52	1461 aa	Known RBP	11.24	□□□□□ -0.61
EFCAB13-205	ENST00000518170	TCERG1	O14776	1098 aa	Known RBP	11.23	□□□□□ -0.61
EFCAB13-205	ENST00000518170	PPM1G	O15355	546 aa	Predicted RBP	11.23	□□□□□ -0.61
EFCAB13-205	ENST00000518170	RGS20	O76081	388 aa		11.23	□□□□□ -0.61
EFCAB13-205	ENST00000518170	COPS2	P61201	443 aa		11.23	□□□□□ -0.61
EFCAB13-205	ENST00000518170	CCDC184	Q52MB2	194 aa		11.23	□□□□□ -0.61
EFCAB13-205	ENST00000518170	TJAP1	Q5JTD0	557 aa		11.23	□□□□□ -0.61
EFCAB13-205	ENST00000518170	FAM9B	Q8IZU0	186 aa		11.23	□□□□□ -0.61
EFCAB13-205	ENST00000518170	ACTN4	O43707	911 aa	Known RBP	11.22	□□□□□ -0.61
EFCAB13-205	ENST00000518170	ARID4B	Q4LE39	1312 aa	Predicted RBP	11.22	□□□□□ -0.61
EFCAB13-205	ENST00000518170	CADPS	Q9ULU8	1353 aa		11.21	□□□□□ -0.61
EFCAB13-205	ENST00000518170	MS4A1	P11836	297 aa		11.21	□□□□□ -0.61
EFCAB13-205	ENST00000518170	REPIN1	Q9BWE0	567 aa	Known RBP	11.21	□□□□□ -0.61
EFCAB13-205	ENST00000518170	IL21	Q9HBE4	155 aa		11.21	□□□□□ -0.61
EFCAB13-205	ENST00000518170	GCGR	P47871	477 aa		11.2	□□□□□ -0.62
EFCAB13-205	ENST00000518170	AMHR2	Q16671	573 aa		11.2	□□□□□ -0.62
EFCAB13-205	ENST00000518170	KIF14	Q15058	1648 aa		11.2	□□□□□ -0.62
EFCAB13-205	ENST00000518170	ROCK2	O75116	1388 aa	Known RBP	11.19	□□□□□ -0.62
EFCAB13-205	ENST00000518170	DHX29	Q7Z478	1369 aa	Known RBP	11.19	□□□□□ -0.62
EFCAB13-205	ENST00000518170	KIF7	Q2M1P5	1343 aa		11.19	□□□□□ -0.62
EFCAB13-205	ENST00000518170	BLOC1S3	Q6QNY0	202 aa		11.19	□□□□□ -0.62
EFCAB13-205	ENST00000518170	ZNF516	Q92618	1163 aa		11.19	□□□□□ -0.62
EFCAB13-205	ENST00000518170	TMUB1	Q9BVT8	246 aa		11.19	□□□□□ -0.62
EFCAB13-205	ENST00000518170	FAM217B	Q9NTX9	383 aa	Predicted RBP	11.19	□□□□□ -0.62
EFCAB13-205	ENST00000518170	ROCK1	Q13464	1354 aa		11.18	□□□□□ -0.62
EFCAB13-205	ENST00000518170	KTN1	Q86UP2	1357 aa	Known RBP	11.18	□□□□□ -0.62
EFCAB13-205	ENST00000518170	KDM6B	O15054	1643 aa		11.18	□□□□□ -0.62
EFCAB13-205	ENST00000518170	CD46	P15529	392 aa		11.18	□□□□□ -0.62
EFCAB13-205	ENST00000518170	SSTR3	P32745	418 aa	Predicted RBP	11.18	□□□□□ -0.62
EFCAB13-205	ENST00000518170	MBD5	Q9P267	1494 aa		11.18	□□□□□ -0.62
EFCAB13-205	ENST00000518170	PUS10	Q3MIT2	529 aa	Known RBP	11.17	□□□□□ -0.62
EFCAB13-205	ENST00000518170	DDRGK1	Q96HY6	314 aa		11.17	□□□□□ -0.62
EFCAB13-205	ENST00000518170	ATP1B4	Q9UN42	357 aa	Predicted RBP	11.17	□□□□□ -0.62
EFCAB13-205	ENST00000518170	SALL2	Q9Y467	1007 aa	Predicted RBP	11.17	□□□□□ -0.62
EFCAB13-205	ENST00000518170	ANKRD30B	Q9BXX2	1392 aa		11.16	□□□□□ -0.62
EFCAB13-205	ENST00000518170	PDE4D	Q08499	809 aa		11.16	□□□□□ -0.62
EFCAB13-205	ENST00000518170	FUT2	Q10981	343 aa		11.16	□□□□□ -0.62
EFCAB13-205	ENST00000518170	GIGYF2	Q6Y7W6	1299 aa	Known RBP	11.16	□□□□□ -0.62
EFCAB13-205	ENST00000518170	L3MBTL2	Q969R5	705 aa		11.15	□□□□□ -0.62
EFCAB13-205	ENST00000518170	DNMT1	P26358	1616 aa	Known RBP	11.15	□□□□□ -0.62
EFCAB13-205	ENST00000518170	LRPPRC	P42704	1394 aa	Known RBP	11.15	□□□□□ -0.63
EFCAB13-205	ENST00000518170	ZMYM4	Q5VZL5	1548 aa		11.14	□□□□□ -0.63
EFCAB13-205	ENST00000518170	ZPR1	O75312	459 aa		11.14	□□□□□ -0.63
EFCAB13-205	ENST00000518170	NR1I2	O75469	434 aa		11.14	□□□□□ -0.63
EFCAB13-205	ENST00000518170	ATP6V1A	P38606	617 aa		11.14	□□□□□ -0.63
EFCAB13-205	ENST00000518170	TPRN	Q4KMQ1	711 aa		11.14	□□□□□ -0.63
EFCAB13-205	ENST00000518170	PARP9	Q8IXQ6	854 aa		11.14	□□□□□ -0.63
EFCAB13-205	ENST00000518170	IL27	Q8NEV9	243 aa		11.14	□□□□□ -0.63
EFCAB13-205	ENST00000518170	UBE2Q2	Q8WVN8	375 aa		11.14	□□□□□ -0.63
EFCAB13-205	ENST00000518170	MPHOSPH9	Q99550	1183 aa		11.14	□□□□□ -0.63
EFCAB13-205	ENST00000518170	KDM5C	P41229	1560 aa		11.14	□□□□□ -0.63
EFCAB13-205	ENST00000518170	INSR	P06213	1382 aa		11.14	□□□□□ -0.63
EFCAB13-205	ENST00000518170	MAGI3	Q5TCQ9	1506 aa		11.14	□□□□□ -0.63
EFCAB13-205	ENST00000518170	NEFM	P07197	916 aa		11.13	□□□□□ -0.63
EFCAB13-205	ENST00000518170		E9PCH4	1651 aa		11.13	□□□□□ -0.63
EFCAB13-205	ENST00000518170	TOPBP1	Q92547	1522 aa		11.13	□□□□□ -0.63
EFCAB13-205	ENST00000518170	NES	P48681	1621 aa		11.13	□□□□□ -0.63
EFCAB13-205	ENST00000518170	POLA1	P09884	1462 aa	Predicted RBP	11.12	□□□□□ -0.63
EFCAB13-205	ENST00000518170	FANCD2	Q9BXW9	1451 aa		11.12	□□□□□ -0.63
EFCAB13-205	ENST00000518170	BCORL1	Q5H9F3	1711 aa		11.12	□□□□□ -0.63
EFCAB13-205	ENST00000518170	KDM4A	O75164	1064 aa		11.12	□□□□□ -0.63
EFCAB13-205	ENST00000518170	NKX2-3	Q8TAU0	364 aa		11.12	□□□□□ -0.63
EFCAB13-205	ENST00000518170	BRD4	O60885	1362 aa	Predicted RBP	11.12	□□□□□ -0.63
EFCAB13-205	ENST00000518170	RRP1	P56182	461 aa	Known RBP	11.11	□□□□□ -0.63
EFCAB13-205	ENST00000518170	GRIPAP1	Q4V328	841 aa		11.11	□□□□□ -0.63
EFCAB13-205	ENST00000518170	NUTM1	Q86Y26	1132 aa		11.11	□□□□□ -0.63
EFCAB13-205	ENST00000518170	SCUBE3	Q8IX30	993 aa		11.11	□□□□□ -0.63
EFCAB13-205	ENST00000518170	BACH2	Q9BYV9	841 aa		11.11	□□□□□ -0.63
EFCAB13-205	ENST00000518170	ADGB	Q8N7X0	1667 aa		11.11	□□□□□ -0.63
EFCAB13-205	ENST00000518170	PDE3B	Q13370	1112 aa		11.1	□□□□□ -0.63
EFCAB13-205	ENST00000518170	NBPF8	Q3BBV2	869 aa		11.1	□□□□□ -0.63
EFCAB13-205	ENST00000518170	KIF15	Q9NS87	1388 aa		11.1	□□□□□ -0.63
EFCAB13-205	ENST00000518170	RALGAPB	Q86X10	1494 aa		11.09	□□□□□ -0.63
EFCAB13-205	ENST00000518170	MORN1	Q5T089	497 aa		11.09	□□□□□ -0.63
EFCAB13-205	ENST00000518170	DAPK1	P53355	1430 aa		11.09	□□□□□ -0.63
EFCAB13-205	ENST00000518170	UHRF1BP1	Q6BDS2	1440 aa		11.09	□□□□□ -0.63
EFCAB13-205	ENST00000518170	PLEKHH2	Q8IVE3	1493 aa		11.08	□□□□□ -0.64
EFCAB13-205	ENST00000518170	PNISR	Q8TF01	805 aa	Known RBP	11.08	□□□□□ -0.64
EFCAB13-205	ENST00000518170	BEGAIN	Q9BUH8	593 aa		11.08	□□□□□ -0.64
EFCAB13-205	ENST00000518170	RRP7BP	Q9NSQ0	103 aa		11.08	□□□□□ -0.64
EFCAB13-205	ENST00000518170	ARHGEF12	Q9NZN5	1544 aa		11.08	□□□□□ -0.64
EFCAB13-205	ENST00000518170	RAD54L2	Q9Y4B4	1467 aa		11.07	□□□□□ -0.64
EFCAB13-205	ENST00000518170	USP47	Q96K76	1375 aa		11.07	□□□□□ -0.64
EFCAB13-205	ENST00000518170	TLL1	O43897	1013 aa		11.07	□□□□□ -0.64
EFCAB13-205	ENST00000518170	SLC27A5	Q9Y2P5	690 aa		11.07	□□□□□ -0.64
EFCAB13-205	ENST00000518170	WDR62	O43379	1518 aa		11.07	□□□□□ -0.64

Retrieved 100 of 20,778 RNA–protein pairs in 53.3 ms