RNA–Protein interactions for RNA: ENST00000518043.5

CPS1-210, Transcript of carbamoyl-phosphate synthase 1, humanhuman

TSL 2

Gene CPS1, Length 585 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPS1-210ENST00000518043 DUOX2Q9NRD8 1548 aa10.26□□□□□ -0.77
CPS1-210ENST00000518043 ANKRD50Q9ULJ7 1429 aa10.25□□□□□ -0.77
CPS1-210ENST00000518043 MAGI2Q86UL8 1455 aa10.25□□□□□ -0.77
CPS1-210ENST00000518043 BCORL1Q5H9F3 1711 aa10.25□□□□□ -0.77
CPS1-210ENST00000518043 KDM5DQ9BY66 1539 aa10.25□□□□□ -0.77
CPS1-210ENST00000518043 TRIM6-TRIM34B2RNG4 842 aa10.25□□□□□ -0.77
CPS1-210ENST00000518043 HRCP23327 699 aa10.25□□□□□ -0.77
CPS1-210ENST00000518043 PROX2Q3B8N5 592 aa10.25□□□□□ -0.77
CPS1-210ENST00000518043 DMRTA1Q5VZB9 504 aa10.25□□□□□ -0.77
CPS1-210ENST00000518043 ZBED2Q9BTP6 218 aa10.25□□□□□ -0.77
CPS1-210ENST00000518043 FAM198AQ9UFP1 575 aa10.25□□□□□ -0.77
CPS1-210ENST00000518043 DEPDC5O75140 1603 aa10.25□□□□□ -0.77
CPS1-210ENST00000518043 MROH1Q8NDA8 1641 aa10.25□□□□□ -0.77
CPS1-210ENST00000518043 SIGLEC1Q9BZZ2 1709 aa10.24□□□□□ -0.77
CPS1-210ENST00000518043 FAM161AQ3B820 660 aa10.24□□□□□ -0.77
CPS1-210ENST00000518043 ADGRG1Q9Y653 693 aa10.24□□□□□ -0.77
CPS1-210ENST00000518043 EIF2AK4Q9P2K8 1649 aaKnown RBP10.24□□□□□ -0.77
CPS1-210ENST00000518043 SPAG9O60271 1321 aaKnown RBP10.24□□□□□ -0.77
CPS1-210ENST00000518043 PZPP20742 1482 aa10.23□□□□□ -0.77
CPS1-210ENST00000518043 RAPGEF3O95398 923 aa10.23□□□□□ -0.77
CPS1-210ENST00000518043 ERBINQ96RT1 1412 aa10.23□□□□□ -0.77
CPS1-210ENST00000518043 YEATS2Q9ULM3 1422 aa10.23□□□□□ -0.77
CPS1-210ENST00000518043 ARHGEF40Q8TER5 1519 aa10.23□□□□□ -0.77
CPS1-210ENST00000518043 ONECUT3O60422 494 aaPredicted RBP10.22□□□□□ -0.77
CPS1-210ENST00000518043 TSPY4P0CV99 314 aa10.22□□□□□ -0.77
CPS1-210ENST00000518043 TSPY10P0CW01 314 aa10.22□□□□□ -0.77
CPS1-210ENST00000518043 VWDEQ8N2E2 1590 aa10.22□□□□□ -0.77
CPS1-210ENST00000518043 RNF17Q9BXT8 1623 aaKnown RBP10.22□□□□□ -0.77
CPS1-210ENST00000518043 OATP04181 439 aa10.21□□□□□ -0.77
CPS1-210ENST00000518043 BRPF1P55201 1214 aaPredicted RBP10.21□□□□□ -0.77
CPS1-210ENST00000518043 PACS2Q86VP3 889 aa10.21□□□□□ -0.77
CPS1-210ENST00000518043 SLC4A5Q9BY07 1137 aa10.21□□□□□ -0.77
CPS1-210ENST00000518043 REREQ9P2R6 1566 aa10.21□□□□□ -0.78
CPS1-210ENST00000518043 PDE4DQ08499 809 aa10.2□□□□□ -0.78
CPS1-210ENST00000518043 METTL3Q86U44 580 aaKnown RBP10.2□□□□□ -0.78
CPS1-210ENST00000518043 IQGAP3Q86VI3 1631 aa10.2□□□□□ -0.78
CPS1-210ENST00000518043 PRDM15P57071 1507 aaPredicted RBP10.19□□□□□ -0.78
CPS1-210ENST00000518043 A2MP01023 1474 aa10.19□□□□□ -0.78
CPS1-210ENST00000518043 NBPF26B4DH59 902 aa10.19□□□□□ -0.78
CPS1-210ENST00000518043 NEUROD2Q15784 382 aa10.19□□□□□ -0.78
CPS1-210ENST00000518043 AMHR2Q16671 573 aa10.19□□□□□ -0.78
CPS1-210ENST00000518043 PXYLP1Q8TE99 480 aa10.19□□□□□ -0.78
CPS1-210ENST00000518043 DHX29Q7Z478 1369 aaKnown RBP10.18□□□□□ -0.78
CPS1-210ENST00000518043 C3orf80F5H4A9 247 aa10.18□□□□□ -0.78
CPS1-210ENST00000518043 NUDT18Q6ZVK8 323 aa10.18□□□□□ -0.78
CPS1-210ENST00000518043 RBM46Q8TBY0 533 aaKnown RBP10.18□□□□□ -0.78
CPS1-210ENST00000518043 TATDN2Q93075 761 aa10.18□□□□□ -0.78
CPS1-210ENST00000518043 PHOX2BQ99453 314 aa10.18□□□□□ -0.78
CPS1-210ENST00000518043 KIAA1468Q9P260 1216 aa10.18□□□□□ -0.78
CPS1-210ENST00000518043 VPS9D1Q9Y2B5 631 aa10.18□□□□□ -0.78
CPS1-210ENST00000518043 RABGEF1Q9UJ41 708 aa10.17□□□□□ -0.78
CPS1-210ENST00000518043 PNMA3Q9UL41 463 aa10.17□□□□□ -0.78
CPS1-210ENST00000518043 FAM135AQ9P2D6 1515 aa10.17□□□□□ -0.78
CPS1-210ENST00000518043 LSM11P83369 360 aaKnown RBP eCLIP10.16□□□□□ -0.78
CPS1-210ENST00000518043 EYA1Q99502 592 aa10.16□□□□□ -0.78
CPS1-210ENST00000518043 TK2O00142 265 aa10.15□□□□□ -0.78
CPS1-210ENST00000518043 SMAPO00193 183 aa10.15□□□□□ -0.78
CPS1-210ENST00000518043 GPBP1L1Q9HC44 474 aaPredicted RBP10.15□□□□□ -0.78
CPS1-210ENST00000518043 AGLP35573 1532 aa10.15□□□□□ -0.78
CPS1-210ENST00000518043 CEP152O94986 1710 aa10.15□□□□□ -0.78
CPS1-210ENST00000518043 TTLL12Q14166 644 aaPredicted RBP10.14□□□□□ -0.79
CPS1-210ENST00000518043 POTEGQ6S5H5 508 aa10.14□□□□□ -0.79
CPS1-210ENST00000518043 ATP10AO60312 1499 aa10.14□□□□□ -0.79
CPS1-210ENST00000518043 TET3O43151 1660 aa10.14□□□□□ -0.79
CPS1-210ENST00000518043 LMTK2Q8IWU2 1503 aa10.13□□□□□ -0.79
CPS1-210ENST00000518043 E9PCH4 1651 aa10.13□□□□□ -0.79
CPS1-210ENST00000518043 POTEMA6NI47 508 aa10.13□□□□□ -0.79
CPS1-210ENST00000518043 ADGRD1Q6QNK2 874 aa10.13□□□□□ -0.79
CPS1-210ENST00000518043 PARP9Q8IXQ6 854 aa10.13□□□□□ -0.79
CPS1-210ENST00000518043 CCER1Q8TC90 406 aaPredicted RBP10.13□□□□□ -0.79
CPS1-210ENST00000518043 NLRP7Q8WX94 980 aa10.13□□□□□ -0.79
CPS1-210ENST00000518043 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP10.12□□□□□ -0.79
CPS1-210ENST00000518043 RCCD1A6NED2 376 aa10.12□□□□□ -0.79
CPS1-210ENST00000518043 MDM2Q00987 491 aaPredicted RBP10.12□□□□□ -0.79
CPS1-210ENST00000518043 ANKRD13DQ6ZTN6 518 aa10.12□□□□□ -0.79
CPS1-210ENST00000518043 MPHOSPH9Q99550 1183 aa10.12□□□□□ -0.79
CPS1-210ENST00000518043 KDM4CQ9H3R0 1056 aa10.12□□□□□ -0.79
CPS1-210ENST00000518043 NUP155O75694 1391 aa10.12□□□□□ -0.79
CPS1-210ENST00000518043 ABCC3O15438 1527 aa10.12□□□□□ -0.79
CPS1-210ENST00000518043 PLA2R1Q13018 1463 aa10.11□□□□□ -0.79
CPS1-210ENST00000518043 CLSPNQ9HAW4 1339 aa10.11□□□□□ -0.79
CPS1-210ENST00000518043 BHMG1C9JSJ3 638 aaPredicted RBP10.11□□□□□ -0.79
CPS1-210ENST00000518043 CLCN1P35523 988 aa10.11□□□□□ -0.79
CPS1-210ENST00000518043 TMUB1Q9BVT8 246 aa10.11□□□□□ -0.79
CPS1-210ENST00000518043 REPIN1Q9BWE0 567 aaKnown RBP10.11□□□□□ -0.79
CPS1-210ENST00000518043 GPCPD1Q9NPB8 672 aa10.11□□□□□ -0.79
CPS1-210ENST00000518043 SEPT9Q9UHD8 586 aaPredicted RBP10.11□□□□□ -0.79
CPS1-210ENST00000518043 EFCAB6Q5THR3 1501 aa10.11□□□□□ -0.79
CPS1-210ENST00000518043 ANKRD30BQ9BXX2 1392 aa10.11□□□□□ -0.79
CPS1-210ENST00000518043 ZC3H13Q5T200 1668 aaKnown RBP10.1□□□□□ -0.79
CPS1-210ENST00000518043 DNAJB2P25686 324 aa10.1□□□□□ -0.79
CPS1-210ENST00000518043 TRIM52Q96A61 297 aa10.1□□□□□ -0.79
CPS1-210ENST00000518043 KRTAP3-3Q9BYR6 98 aa10.1□□□□□ -0.79
CPS1-210ENST00000518043 KRTAP3-2Q9BYR7 98 aa10.1□□□□□ -0.79
CPS1-210ENST00000518043 NBPF3Q9H094 633 aa10.1□□□□□ -0.79
CPS1-210ENST00000518043 CAMSAP1Q5T5Y3 1602 aa10.1□□□□□ -0.79
CPS1-210ENST00000518043 ACIN1Q9UKV3 1341 aaKnown RBP10.09□□□□□ -0.79
CPS1-210ENST00000518043 GIGYF2Q6Y7W6 1299 aaKnown RBP10.09□□□□□ -0.79
CPS1-210ENST00000518043 KIF3BO15066 747 aa10.08□□□□□ -0.8
CPS1-210ENST00000518043 HRO43593 1189 aa10.08□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 68.5 ms