RNA–Protein interactions for RNA: ENST00000517980.5

CTNNA1-206, Transcript of catenin alpha 1, humanhuman

TSL 4

Gene CTNNA1, Length 696 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-206ENST00000517980 ATP7BP35670 1465 aa25.02■■□□□ 1.6
CTNNA1-206ENST00000517980 KIAA1210Q9ULL0 1709 aa25.01■■□□□ 1.59
CTNNA1-206ENST00000517980 ONECUT3O60422 494 aaPredicted RBP25.01■■□□□ 1.59
CTNNA1-206ENST00000517980 NBPF8Q3BBV2 869 aa25.01■■□□□ 1.59
CTNNA1-206ENST00000517980 L3MBTL2Q969R5 705 aa25.01■■□□□ 1.59
CTNNA1-206ENST00000517980 ACEP12821 1306 aa25.01■■□□□ 1.59
CTNNA1-206ENST00000517980 A0A0G2JS52 829 aa25■■□□□ 1.59
CTNNA1-206ENST00000517980 MYT1Q01538 1121 aa25■■□□□ 1.59
CTNNA1-206ENST00000517980 NEUROD1Q13562 356 aa25■■□□□ 1.59
CTNNA1-206ENST00000517980 FAM98CQ17RN3 349 aaKnown RBP25■■□□□ 1.59
CTNNA1-206ENST00000517980 CCDC61Q9Y6R9 512 aa25■■□□□ 1.59
CTNNA1-206ENST00000517980 ITSN1Q15811 1721 aa24.99■■□□□ 1.59
CTNNA1-206ENST00000517980 ZC3H6P61129 1189 aaKnown RBP24.97■■□□□ 1.59
CTNNA1-206ENST00000517980 CHRNA2Q15822 529 aa24.97■■□□□ 1.59
CTNNA1-206ENST00000517980 KRT27Q7Z3Y8 459 aa24.97■■□□□ 1.59
CTNNA1-206ENST00000517980 CABP2Q9NPB3 220 aa24.97■■□□□ 1.59
CTNNA1-206ENST00000517980 PRDM11Q9NQV5 511 aa24.97■■□□□ 1.59
CTNNA1-206ENST00000517980 PLEKHG3A1L390 1219 aa24.96■■□□□ 1.59
CTNNA1-206ENST00000517980 SRPK2P78362 688 aaKnown RBP24.96■■□□□ 1.59
CTNNA1-206ENST00000517980 DEFB132Q7Z7B7 95 aa24.96■■□□□ 1.59
CTNNA1-206ENST00000517980 ZRANB1Q9UGI0 708 aa24.95■■□□□ 1.58
CTNNA1-206ENST00000517980 COL14A1Q05707 1796 aaKnown RBP24.95■■□□□ 1.58
CTNNA1-206ENST00000517980 NRAPQ86VF7 1730 aa24.95■■□□□ 1.58
CTNNA1-206ENST00000517980 CENPJQ9HC77 1338 aaPredicted RBP24.94■■□□□ 1.58
CTNNA1-206ENST00000517980 CRYBG1Q9Y4K1 1723 aa24.94■■□□□ 1.58
CTNNA1-206ENST00000517980 POLR3AO14802 1390 aaPredicted RBP24.93■■□□□ 1.58
CTNNA1-206ENST00000517980 KIAA0232Q92628 1395 aa24.93■■□□□ 1.58
CTNNA1-206ENST00000517980 FAM182BQ5T319 152 aa24.92■■□□□ 1.58
CTNNA1-206ENST00000517980 ABTB2Q8N961 1025 aa24.92■■□□□ 1.58
CTNNA1-206ENST00000517980 SRCAPQ6ZRS2 3230 aa24.91■■□□□ 1.58
CTNNA1-206ENST00000517980 STRN4Q9NRL3 753 aa24.91■■□□□ 1.58
CTNNA1-206ENST00000517980 SPATA31A5Q5VU36 1347 aa24.9■■□□□ 1.58
CTNNA1-206ENST00000517980 SPATA31A7Q8IWB4 1347 aa24.9■■□□□ 1.58
CTNNA1-206ENST00000517980 BLMP54132 1417 aaPredicted RBP24.9■■□□□ 1.58
CTNNA1-206ENST00000517980 SF3B2Q13435 895 aaKnown RBP24.9■■□□□ 1.58
CTNNA1-206ENST00000517980 TOPAZ1Q8N9V7 1692 aa24.89■■□□□ 1.58
CTNNA1-206ENST00000517980 PPIP5K1Q6PFW1 1433 aa24.87■■□□□ 1.57
CTNNA1-206ENST00000517980 CABP1Q9NZU7 370 aa24.87■■□□□ 1.57
CTNNA1-206ENST00000517980 QRICH2Q9H0J4 1663 aa24.85■■□□□ 1.57
CTNNA1-206ENST00000517980 EVA1CP58658 441 aa24.85■■□□□ 1.57
CTNNA1-206ENST00000517980 PHRF1Q9P1Y6 1649 aaKnown RBP24.85■■□□□ 1.57
CTNNA1-206ENST00000517980 USP35Q9P2H5 1018 aa24.84■■□□□ 1.57
CTNNA1-206ENST00000517980 SPATA31A1Q5TZJ5 1347 aa24.83■■□□□ 1.56
CTNNA1-206ENST00000517980 NLRP13Q86W25 1043 aa24.82■■□□□ 1.56
CTNNA1-206ENST00000517980 GCP02774 474 aa24.81■■□□□ 1.56
CTNNA1-206ENST00000517980 TRPM1Q7Z4N2 1603 aa24.8■■□□□ 1.56
CTNNA1-206ENST00000517980 ZBTB7CA1YPR0 619 aa24.8■■□□□ 1.56
CTNNA1-206ENST00000517980 ROCK2O75116 1388 aaKnown RBP24.79■■□□□ 1.56
CTNNA1-206ENST00000517980 NLRP6P59044 892 aa24.78■■□□□ 1.56
CTNNA1-206ENST00000517980 LARP1Q6PKG0 1096 aaKnown RBP24.78■■□□□ 1.56
CTNNA1-206ENST00000517980 EVC2Q86UK5 1308 aa24.78■■□□□ 1.56
CTNNA1-206ENST00000517980 USP19O94966 1318 aa24.77■■□□□ 1.56
CTNNA1-206ENST00000517980 CAMTA1Q9Y6Y1 1673 aa24.76■■□□□ 1.55
CTNNA1-206ENST00000517980 BAG6P46379 1132 aa24.76■■□□□ 1.55
CTNNA1-206ENST00000517980 EN1Q05925 392 aaPredicted RBP24.76■■□□□ 1.55
CTNNA1-206ENST00000517980 NRKQ7Z2Y5 1582 aa24.74■■□□□ 1.55
CTNNA1-206ENST00000517980 THSD7AQ9UPZ6 1657 aa24.74■■□□□ 1.55
CTNNA1-206ENST00000517980 SSH2Q76I76 1423 aa24.73■■□□□ 1.55
CTNNA1-206ENST00000517980 USP6P35125 1406 aa24.72■■□□□ 1.55
CTNNA1-206ENST00000517980 CPDO75976 1380 aa24.71■■□□□ 1.55
CTNNA1-206ENST00000517980 PSDA5PKW4 1024 aaPredicted RBP24.71■■□□□ 1.55
CTNNA1-206ENST00000517980 TRIM37O94972 964 aa24.71■■□□□ 1.55
CTNNA1-206ENST00000517980 PDE3BQ13370 1112 aa24.69■■□□□ 1.54
CTNNA1-206ENST00000517980 BARGINQ6ZT62 677 aa24.69■■□□□ 1.54
CTNNA1-206ENST00000517980 TCP11L2Q8N4U5 519 aa24.69■■□□□ 1.54
CTNNA1-206ENST00000517980 BRD4O60885 1362 aaPredicted RBP24.68■■□□□ 1.54
CTNNA1-206ENST00000517980 FAM196AQ6ZSG2 479 aa24.68■■□□□ 1.54
CTNNA1-206ENST00000517980 LMO7Q8WWI1 1683 aa24.68■■□□□ 1.54
CTNNA1-206ENST00000517980 TTC21BQ7Z4L5 1316 aa24.67■■□□□ 1.54
CTNNA1-206ENST00000517980 SOX12O15370 315 aa24.67■■□□□ 1.54
CTNNA1-206ENST00000517980 ZNF692Q9BU19 519 aaPredicted RBP24.67■■□□□ 1.54
CTNNA1-206ENST00000517980 EZH2Q15910 746 aaKnown RBP24.66■■□□□ 1.54
CTNNA1-206ENST00000517980 CARD11Q9BXL7 1154 aa24.66■■□□□ 1.54
CTNNA1-206ENST00000517980 RGPD1P0DJD0 1748 aa24.66■■□□□ 1.54
CTNNA1-206ENST00000517980 AXIN2Q9Y2T1 843 aa24.64■■□□□ 1.54
CTNNA1-206ENST00000517980 PIK3C2AO00443 1686 aa24.63■■□□□ 1.53
CTNNA1-206ENST00000517980 APBA3O96018 575 aa24.63■■□□□ 1.53
CTNNA1-206ENST00000517980 THRAP3Q9Y2W1 955 aaKnown RBP24.62■■□□□ 1.53
CTNNA1-206ENST00000517980 COL5A2P05997 1499 aaPredicted RBP24.62■■□□□ 1.53
CTNNA1-206ENST00000517980 AKAP12Q02952 1782 aa24.61■■□□□ 1.53
CTNNA1-206ENST00000517980 TNS1Q9HBL0 1735 aaKnown RBP24.61■■□□□ 1.53
CTNNA1-206ENST00000517980 AATKQ6ZMQ8 1374 aa24.6■■□□□ 1.53
CTNNA1-206ENST00000517980 TOM1L2Q6ZVM7 507 aa24.6■■□□□ 1.53
CTNNA1-206ENST00000517980 SUGP2Q8IX01 1082 aaKnown RBP eCLIP24.6■■□□□ 1.531e-6■■□□□ 12.4
CTNNA1-206ENST00000517980 CAMKK2Q96RR4 588 aa24.6■■□□□ 1.53
CTNNA1-206ENST00000517980 SLIT3O75094 1523 aa24.6■■□□□ 1.53
CTNNA1-206ENST00000517980 RGPD5Q99666 1765 aa24.59■■□□□ 1.53
CTNNA1-206ENST00000517980 KTN1Q86UP2 1357 aaKnown RBP24.59■■□□□ 1.53
CTNNA1-206ENST00000517980 R3HDM1Q15032 1099 aaKnown RBP24.59■■□□□ 1.53
CTNNA1-206ENST00000517980 TMC1Q8TDI8 760 aa24.59■■□□□ 1.53
CTNNA1-206ENST00000517980 TONSLQ96HA7 1378 aa24.58■■□□□ 1.53
CTNNA1-206ENST00000517980 COL18A1P39060 1754 aa24.58■■□□□ 1.53
CTNNA1-206ENST00000517980 ARHGEF25Q86VW2 580 aa24.58■■□□□ 1.53
CTNNA1-206ENST00000517980 CRB1P82279 1406 aa24.58■■□□□ 1.53
CTNNA1-206ENST00000517980 CPSF1Q10570 1443 aaKnown RBP24.57■■□□□ 1.52
CTNNA1-206ENST00000517980 TTC21AQ8NDW8 1320 aa24.57■■□□□ 1.52
CTNNA1-206ENST00000517980 KCNH5Q8NCM2 988 aa24.56■■□□□ 1.52
CTNNA1-206ENST00000517980 SLC12A5Q9H2X9 1139 aa24.56■■□□□ 1.52
CTNNA1-206ENST00000517980 DISP2A7MBM2 1401 aa24.53■■□□□ 1.52
CTNNA1-206ENST00000517980 CSB-PGBD3P0DP91 1061 aa24.53■■□□□ 1.52
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms