RNA–Protein interactions for RNA: ENST00000517660.1

PDGFRB-203, Transcript of platelet derived growth factor receptor beta, humanhuman

TSL 3

Gene PDGFRB, Length 611 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFRB-203ENST00000517660 SPATA31A7Q8IWB4 1347 aa15.42■□□□□ 0.06
PDGFRB-203ENST00000517660 PARD3Q8TEW0 1356 aa15.41■□□□□ 0.06
PDGFRB-203ENST00000517660 C1QTNF8P60827 252 aa15.41■□□□□ 0.06
PDGFRB-203ENST00000517660 BTG4Q9NY30 223 aa15.41■□□□□ 0.06
PDGFRB-203ENST00000517660 SBNO1A3KN83 1393 aa15.4■□□□□ 0.06
PDGFRB-203ENST00000517660 KCNQ2O43526 872 aa15.4■□□□□ 0.06
PDGFRB-203ENST00000517660 HAP1P54257 671 aaPredicted RBP15.4■□□□□ 0.06
PDGFRB-203ENST00000517660 IFT172Q9UG01 1749 aa15.4■□□□□ 0.06
PDGFRB-203ENST00000517660 APBA3O96018 575 aa15.39■□□□□ 0.05
PDGFRB-203ENST00000517660 PRAM1Q96QH2 718 aa15.39■□□□□ 0.05
PDGFRB-203ENST00000517660 SPON1Q9HCB6 807 aa15.39■□□□□ 0.05
PDGFRB-203ENST00000517660 POGKQ9P215 609 aa15.39■□□□□ 0.05
PDGFRB-203ENST00000517660 PPP1R1BQ9UD71 204 aaPredicted RBP15.38■□□□□ 0.05
PDGFRB-203ENST00000517660 COL14A1Q05707 1796 aaKnown RBP15.36■□□□□ 0.05
PDGFRB-203ENST00000517660 SAFB2Q14151 953 aaKnown RBP eCLIP15.36■□□□□ 0.05
PDGFRB-203ENST00000517660 TRAK1Q9UPV9 953 aa15.36■□□□□ 0.05
PDGFRB-203ENST00000517660 ARHGEF10O15013 1369 aa15.36■□□□□ 0.05
PDGFRB-203ENST00000517660 RGPD8O14715 1765 aaPredicted RBP15.35■□□□□ 0.05
PDGFRB-203ENST00000517660 FAM196AQ6ZSG2 479 aa15.35■□□□□ 0.05
PDGFRB-203ENST00000517660 PHF8Q9UPP1 1060 aa15.35■□□□□ 0.05
PDGFRB-203ENST00000517660 NRKQ7Z2Y5 1582 aa15.35■□□□□ 0.05
PDGFRB-203ENST00000517660 CASZ1Q86V15 1759 aa15.34■□□□□ 0.05
PDGFRB-203ENST00000517660 DCAF8L1A6NGE4 600 aa15.33■□□□□ 0.04
PDGFRB-203ENST00000517660 PSME1Q06323 249 aa15.33■□□□□ 0.04
PDGFRB-203ENST00000517660 LMOD2Q6P5Q4 547 aa15.33■□□□□ 0.04
PDGFRB-203ENST00000517660 PDGFDQ9GZP0 370 aaPredicted RBP15.33■□□□□ 0.04
PDGFRB-203ENST00000517660 KNDC1Q76NI1 1749 aa15.33■□□□□ 0.04
PDGFRB-203ENST00000517660 TRPM3Q9HCF6 1732 aaPredicted RBP15.33■□□□□ 0.04
PDGFRB-203ENST00000517660 SPATA31A1Q5TZJ5 1347 aa15.33■□□□□ 0.04
PDGFRB-203ENST00000517660 CRYBG1Q9Y4K1 1723 aa15.32■□□□□ 0.04
PDGFRB-203ENST00000517660 DLC1Q96QB1 1528 aa15.32■□□□□ 0.04
PDGFRB-203ENST00000517660 MYOM1P52179 1685 aa15.32■□□□□ 0.04
PDGFRB-203ENST00000517660 NBPF8Q3BBV2 869 aa15.31■□□□□ 0.04
PDGFRB-203ENST00000517660 NBPF14Q5TI25 921 aa15.31■□□□□ 0.04
PDGFRB-203ENST00000517660 ADGRB1O14514 1584 aa15.31■□□□□ 0.04
PDGFRB-203ENST00000517660 ALS2Q96Q42 1657 aa15.31■□□□□ 0.04
PDGFRB-203ENST00000517660 ANO8Q9HCE9 1232 aaPredicted RBP15.3■□□□□ 0.04
PDGFRB-203ENST00000517660 MINK1Q8N4C8 1332 aaPredicted RBP15.29■□□□□ 0.04
PDGFRB-203ENST00000517660 PTGER2P43116 358 aa15.29■□□□□ 0.04
PDGFRB-203ENST00000517660 HIRIP3Q9BW71 556 aaPredicted RBP15.29■□□□□ 0.04
PDGFRB-203ENST00000517660 WASLO00401 505 aaPredicted RBP15.27■□□□□ 0.04
PDGFRB-203ENST00000517660 PMFBP1Q8TBY8 1022 aa15.26■□□□□ 0.03
PDGFRB-203ENST00000517660 ANKARQ7Z5J8 1434 aa15.26■□□□□ 0.03
PDGFRB-203ENST00000517660 EIF3AQ14152 1382 aaKnown RBP15.25■□□□□ 0.03
PDGFRB-203ENST00000517660 NBPF1Q3BBV0 1214 aa15.24■□□□□ 0.03
PDGFRB-203ENST00000517660 L3MBTL2Q969R5 705 aa15.24■□□□□ 0.03
PDGFRB-203ENST00000517660 SIN3AQ96ST3 1273 aa15.24■□□□□ 0.03
PDGFRB-203ENST00000517660 ZBTB7AO95365 584 aa15.23■□□□□ 0.03
PDGFRB-203ENST00000517660 PRR36Q9H6K5 1346 aa15.22■□□□□ 0.03
PDGFRB-203ENST00000517660 NEUROD1Q13562 356 aa15.22■□□□□ 0.03
PDGFRB-203ENST00000517660 SYT17Q9BSW7 474 aa15.22■□□□□ 0.03
PDGFRB-203ENST00000517660 FHDC1Q9C0D6 1143 aaPredicted RBP15.22■□□□□ 0.03
PDGFRB-203ENST00000517660 PRDM11Q9NQV5 511 aa15.22■□□□□ 0.03
PDGFRB-203ENST00000517660 KIAA0232Q92628 1395 aa15.22■□□□□ 0.03
PDGFRB-203ENST00000517660 CHRNA2Q15822 529 aa15.21■□□□□ 0.03
PDGFRB-203ENST00000517660 BARGINQ6ZT62 677 aa15.21■□□□□ 0.03
PDGFRB-203ENST00000517660 RGPD3A6NKT7 1758 aaPredicted RBP15.21■□□□□ 0.02
PDGFRB-203ENST00000517660 RGPD4Q7Z3J3 1758 aa15.21■□□□□ 0.02
PDGFRB-203ENST00000517660 PEAK1Q9H792 1746 aa15.2■□□□□ 0.02
PDGFRB-203ENST00000517660 GOLGB1Q14789 3259 aaKnown RBP15.2■□□□□ 0.02
PDGFRB-203ENST00000517660 PTF1AQ7RTS3 328 aa15.2■□□□□ 0.02
PDGFRB-203ENST00000517660 PROM2Q8N271 834 aa15.2■□□□□ 0.02
PDGFRB-203ENST00000517660 NGDNQ8NEJ9 315 aaKnown RBP15.2■□□□□ 0.02
PDGFRB-203ENST00000517660 NUDT16Q96DE0 195 aaKnown RBP15.2■□□□□ 0.02
PDGFRB-203ENST00000517660 SGIP1Q9BQI5 828 aa15.2■□□□□ 0.02
PDGFRB-203ENST00000517660 CDK19Q9BWU1 502 aa15.2■□□□□ 0.02
PDGFRB-203ENST00000517660 STRN4Q9NRL3 753 aa15.2■□□□□ 0.02
PDGFRB-203ENST00000517660 GPRASP1Q5JY77 1395 aa15.2■□□□□ 0.02
PDGFRB-203ENST00000517660 PDE3BQ13370 1112 aa15.19■□□□□ 0.02
PDGFRB-203ENST00000517660 USP35Q9P2H5 1018 aa15.19■□□□□ 0.02
PDGFRB-203ENST00000517660 ATF5Q9Y2D1 282 aaPredicted RBP15.19■□□□□ 0.02
PDGFRB-203ENST00000517660 CHD4Q14839 1912 aa15.19■□□□□ 0.02
PDGFRB-203ENST00000517660 SSH2Q76I76 1423 aa15.18■□□□□ 0.02
PDGFRB-203ENST00000517660 PHRF1Q9P1Y6 1649 aaKnown RBP15.17■□□□□ 0.02
PDGFRB-203ENST00000517660 SHANK3Q9BYB0 1731 aa15.17■□□□□ 0.02
PDGFRB-203ENST00000517660 GIGYF1O75420 1035 aaPredicted RBP15.17■□□□□ 0.02
PDGFRB-203ENST00000517660 TULP4Q9NRJ4 1543 aa15.17■□□□□ 0.02
PDGFRB-203ENST00000517660 PLSCR1O15162 318 aa15.16■□□□□ 0.02
PDGFRB-203ENST00000517660 TRIM26Q12899 539 aaPredicted RBP15.16■□□□□ 0.02
PDGFRB-203ENST00000517660 CCDC61Q9Y6R9 512 aa15.16■□□□□ 0.02
PDGFRB-203ENST00000517660 CENPJQ9HC77 1338 aaPredicted RBP15.16■□□□□ 0.02
PDGFRB-203ENST00000517660 LARP1Q6PKG0 1096 aaKnown RBP15.15■□□□□ 0.02
PDGFRB-203ENST00000517660 PARP4Q9UKK3 1724 aaKnown RBP15.14■□□□□ 0.01
PDGFRB-203ENST00000517660 PLEKHG3A1L390 1219 aa15.14■□□□□ 0.01
PDGFRB-203ENST00000517660 PAK3O75914 559 aaPredicted RBP15.14■□□□□ 0.01
PDGFRB-203ENST00000517660 LMO7Q8WWI1 1683 aa15.13■□□□□ 0.01
PDGFRB-203ENST00000517660 KIAA1210Q9ULL0 1709 aa15.13■□□□□ 0.01
PDGFRB-203ENST00000517660 ZC3H6P61129 1189 aaKnown RBP15.12■□□□□ 0.01
PDGFRB-203ENST00000517660 SRPK2P78362 688 aaKnown RBP15.12■□□□□ 0.01
PDGFRB-203ENST00000517660 TCP11L2Q8N4U5 519 aa15.12■□□□□ 0.01
PDGFRB-203ENST00000517660 MAP3K5Q99683 1374 aa15.11■□□□□ 0.01
PDGFRB-203ENST00000517660 SBF2Q86WG5 1849 aa15.11■□□□□ 0.01
PDGFRB-203ENST00000517660 ATP7BP35670 1465 aa15.11■□□□□ 0.01
PDGFRB-203ENST00000517660 ACEP12821 1306 aa15.11■□□□□ 0.01
PDGFRB-203ENST00000517660 OVOS2A0A0G2JMS6 1433 aa15.1■□□□□ 0.01
PDGFRB-203ENST00000517660 OVOS2A0A0J9YW53 1432 aa15.1■□□□□ 0.01
PDGFRB-203ENST00000517660 OVOS2Q6IE36 1432 aa15.1■□□□□ 0.01
PDGFRB-203ENST00000517660 ARHGEF28Q8N1W1 1705 aaKnown RBP15.1■□□□□ 0.01
PDGFRB-203ENST00000517660 CABP2Q9NPB3 220 aa15.1■□□□□ 0.01
PDGFRB-203ENST00000517660 BCL11BQ9C0K0 894 aaPredicted RBP15.09■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 48.8 ms