RNA–Protein interactions for RNA: ENST00000517625.5

SKP1-203, Transcript of S-phase kinase associated protein 1, humanhuman

APPRIS P4 TSL 3 BASIC

Gene SKP1, Length 876 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKP1-203ENST00000517625 S1PR4O95977 384 aa6.03□□□□□ -1.44
SKP1-203ENST00000517625 CTHP32929 405 aa6.03□□□□□ -1.44
SKP1-203ENST00000517625 ANKLE1Q8NAG6 615 aa6.03□□□□□ -1.44
SKP1-203ENST00000517625 PDXDC2PQ6P474 469 aa6.02□□□□□ -1.45
SKP1-203ENST00000517625 MAP10Q9P2G4 905 aa6.02□□□□□ -1.45
SKP1-203ENST00000517625 ZNF330Q9Y3S2 320 aaPredicted RBP6.02□□□□□ -1.45
SKP1-203ENST00000517625 IRF5Q13568 498 aa6.01□□□□□ -1.45
SKP1-203ENST00000517625 NKX2-3Q8TAU0 364 aa6.01□□□□□ -1.45
SKP1-203ENST00000517625 EPS8L1Q8TE68 723 aa6.01□□□□□ -1.45
SKP1-203ENST00000517625 FCF1Q9Y324 198 aaKnown RBP6.01□□□□□ -1.45
SKP1-203ENST00000517625 ZBBXA8MT70 800 aa6□□□□□ -1.45
SKP1-203ENST00000517625 MCCD1P59942 119 aaPredicted RBP6□□□□□ -1.45
SKP1-203ENST00000517625 NR1H3Q13133 447 aa6□□□□□ -1.45
SKP1-203ENST00000517625 UNC93B1Q9H1C4 597 aa6□□□□□ -1.45
SKP1-203ENST00000517625 EIF4ENIF1Q9NRA8 985 aaKnown RBP6□□□□□ -1.45
SKP1-203ENST00000517625 RNF223E7ERA6 249 aa5.99□□□□□ -1.45
SKP1-203ENST00000517625 EIF4G2P78344 907 aaKnown RBP eCLIP5.99□□□□□ -1.45
SKP1-203ENST00000517625 PTK2Q05397 1052 aa5.99□□□□□ -1.45
SKP1-203ENST00000517625 CCDC24Q8N4L8 307 aa5.99□□□□□ -1.45
SKP1-203ENST00000517625 ZBTB24O43167 697 aaPredicted RBP5.98□□□□□ -1.45
SKP1-203ENST00000517625 RPIAP49247 311 aa5.98□□□□□ -1.45
SKP1-203ENST00000517625 WNT7BP56706 349 aa5.97□□□□□ -1.45
SKP1-203ENST00000517625 PPP1R18Q6NYC8 613 aa5.97□□□□□ -1.45
SKP1-203ENST00000517625 SH3BP5LQ7L8J4 393 aa5.97□□□□□ -1.45
SKP1-203ENST00000517625 BPHLQ86WA6 291 aaPredicted RBP5.97□□□□□ -1.45
SKP1-203ENST00000517625 SERPINA10Q9UK55 444 aa5.97□□□□□ -1.45
SKP1-203ENST00000517625 SUPT5HO00267 1087 aaKnown RBP5.96□□□□□ -1.46
SKP1-203ENST00000517625 FBXO45P0C2W1 286 aa5.96□□□□□ -1.46
SKP1-203ENST00000517625 PTCRAQ6ISU1 281 aaPredicted RBP5.96□□□□□ -1.46
SKP1-203ENST00000517625 ZNF511Q8NB15 262 aa5.96□□□□□ -1.46
SKP1-203ENST00000517625 TRIM32Q13049 653 aa5.95□□□□□ -1.46
SKP1-203ENST00000517625 SH3RF1Q7Z6J0 888 aa5.95□□□□□ -1.46
SKP1-203ENST00000517625 GLMNQ92990 594 aa5.95□□□□□ -1.46
SKP1-203ENST00000517625 CCDC97Q96F63 343 aaPredicted RBP5.95□□□□□ -1.46
SKP1-203ENST00000517625 CALR3Q96L12 384 aaKnown RBP5.95□□□□□ -1.46
SKP1-203ENST00000517625 ARHGAP9Q9BRR9 750 aa5.95□□□□□ -1.46
SKP1-203ENST00000517625 PLA2G2EQ9NZK7 142 aa5.95□□□□□ -1.46
SKP1-203ENST00000517625 CDV3Q9UKY7 258 aaKnown RBP5.95□□□□□ -1.46
SKP1-203ENST00000517625 A0A0G2JS52 829 aa5.94□□□□□ -1.46
SKP1-203ENST00000517625 VAC14Q08AM6 782 aa5.94□□□□□ -1.46
SKP1-203ENST00000517625 SEMA3FQ13275 785 aa5.94□□□□□ -1.46
SKP1-203ENST00000517625 CCDC125Q86Z20 511 aa5.94□□□□□ -1.46
SKP1-203ENST00000517625 ALG2Q9H553 416 aa5.94□□□□□ -1.46
SKP1-203ENST00000517625 ZNF777Q9ULD5 760 aaPredicted RBP5.94□□□□□ -1.46
SKP1-203ENST00000517625 POM121CA8CG34 1229 aa5.93□□□□□ -1.46
SKP1-203ENST00000517625 CD2BP2O95400 341 aaKnown RBP5.93□□□□□ -1.46
SKP1-203ENST00000517625 ZBTB33Q86T24 672 aa5.93□□□□□ -1.46
SKP1-203ENST00000517625 TRMT44Q8IYL2 757 aaKnown RBP5.93□□□□□ -1.46
SKP1-203ENST00000517625 NFATC2IPQ8NCF5 419 aa5.93□□□□□ -1.46
SKP1-203ENST00000517625 BAP1Q92560 729 aa5.93□□□□□ -1.46
SKP1-203ENST00000517625 C1QTNF2Q9BXJ5 285 aa5.93□□□□□ -1.46
SKP1-203ENST00000517625 C1orf115Q9H7X2 142 aa5.93□□□□□ -1.46
SKP1-203ENST00000517625 ARID3CA6NKF2 412 aa5.92□□□□□ -1.46
SKP1-203ENST00000517625 PPEF1O14829 653 aaPredicted RBP5.92□□□□□ -1.46
SKP1-203ENST00000517625 VARSP26640 1264 aaKnown RBP5.92□□□□□ -1.46
SKP1-203ENST00000517625 CCDC82Q8N4S0 544 aa5.92□□□□□ -1.46
SKP1-203ENST00000517625 ADAM32Q8TC27 787 aa5.92□□□□□ -1.46
SKP1-203ENST00000517625 SH3BP2P78314 561 aa5.91□□□□□ -1.46
SKP1-203ENST00000517625 AGERQ15109 404 aa5.91□□□□□ -1.46
SKP1-203ENST00000517625 NBPF20Q3BBV1 942 aa5.91□□□□□ -1.46
SKP1-203ENST00000517625 PLA2G2CQ5R387 149 aa5.91□□□□□ -1.46
SKP1-203ENST00000517625 HDGFL1Q5TGJ6 251 aa5.91□□□□□ -1.46
SKP1-203ENST00000517625 MPNDQ8N594 471 aa5.91□□□□□ -1.46
SKP1-203ENST00000517625 TRIM52Q96A61 297 aa5.91□□□□□ -1.46
SKP1-203ENST00000517625 SLC10A4Q96EP9 437 aa5.91□□□□□ -1.46
SKP1-203ENST00000517625 OCSTAMPQ9BR26 566 aa5.91□□□□□ -1.46
SKP1-203ENST00000517625 MAP4K5Q9Y4K4 846 aa5.91□□□□□ -1.46
SKP1-203ENST00000517625 V9GY48 417 aaPredicted RBP5.91□□□□□ -1.46
SKP1-203ENST00000517625 RGS20O76081 388 aa5.9□□□□□ -1.46
SKP1-203ENST00000517625 LINC01559Q495D7 138 aa5.9□□□□□ -1.46
SKP1-203ENST00000517625 ERFEQ4G0M1 354 aa5.9□□□□□ -1.46
SKP1-203ENST00000517625 SEPT12Q8IYM1 358 aa5.9□□□□□ -1.46
SKP1-203ENST00000517625 FAM174AQ8TBP5 190 aa5.9□□□□□ -1.46
SKP1-203ENST00000517625 ADAMTS19Q8TE59 1207 aa5.9□□□□□ -1.46
SKP1-203ENST00000517625 MAGEB6P1A0A0J9YX57 407 aa5.89□□□□□ -1.47
SKP1-203ENST00000517625 LZTS3O60299 673 aaPredicted RBP5.89□□□□□ -1.47
SKP1-203ENST00000517625 SLC19A1P41440 591 aa5.89□□□□□ -1.47
SKP1-203ENST00000517625 RNF20Q5VTR2 975 aa5.89□□□□□ -1.47
SKP1-203ENST00000517625 DZIP3Q86Y13 1208 aaKnown RBP5.89□□□□□ -1.47
SKP1-203ENST00000517625 FOXJ1Q92949 421 aa5.89□□□□□ -1.47
SKP1-203ENST00000517625 ARXQ96QS3 562 aa5.89□□□□□ -1.47
SKP1-203ENST00000517625 PCDHB9Q9Y5E1 797 aa5.89□□□□□ -1.47
SKP1-203ENST00000517625 WNT7AO00755 349 aa5.88□□□□□ -1.47
SKP1-203ENST00000517625 PPP1R15AO75807 674 aaPredicted RBP5.88□□□□□ -1.47
SKP1-203ENST00000517625 LIAT1Q6ZQX7 453 aa5.88□□□□□ -1.47
SKP1-203ENST00000517625 CARD14Q9BXL6 1004 aa5.88□□□□□ -1.47
SKP1-203ENST00000517625 SKOR1P84550 965 aa5.87□□□□□ -1.47
SKP1-203ENST00000517625 SLFNL1Q499Z3 407 aa5.87□□□□□ -1.47
SKP1-203ENST00000517625 C4orf48Q5BLP8 95 aa5.87□□□□□ -1.47
SKP1-203ENST00000517625 SPRYD7Q5W111 196 aa5.87□□□□□ -1.47
SKP1-203ENST00000517625 EHBP1Q8NDI1 1231 aa5.87□□□□□ -1.47
SKP1-203ENST00000517625 PPP1R12CQ9BZL4 782 aa5.87□□□□□ -1.47
SKP1-203ENST00000517625 CEP126Q9P2H0 1117 aa5.87□□□□□ -1.47
SKP1-203ENST00000517625 CHIC2Q9UKJ5 165 aa5.87□□□□□ -1.47
SKP1-203ENST00000517625 ESPNB1AK53 854 aa5.86□□□□□ -1.47
SKP1-203ENST00000517625 ATP9BO43861 1147 aa5.86□□□□□ -1.47
SKP1-203ENST00000517625 MAP7D1Q3KQU3 841 aa5.86□□□□□ -1.47
SKP1-203ENST00000517625 RC3H1Q5TC82 1133 aaKnown RBP5.86□□□□□ -1.47
SKP1-203ENST00000517625 ZNF598Q86UK7 904 aaKnown RBP5.86□□□□□ -1.47
SKP1-203ENST00000517625 PLEKHM2Q8IWE5 1019 aa5.86□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 115 ms