RNA–Protein interactions for RNA: ENST00000517352.1

TNFRSF11B-202, Transcript of TNF receptor superfamily member 11b, humanhuman

TSL 1 (best)

Gene TNFRSF11B, Length 1,144 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF11B-202ENST00000517352 RTN4Q9NQC3 1192 aaKnown RBP10.65□□□□□ -0.7
TNFRSF11B-202ENST00000517352 USP35Q9P2H5 1018 aa10.65□□□□□ -0.7
TNFRSF11B-202ENST00000517352 KIF1AQ12756 1690 aa10.65□□□□□ -0.7
TNFRSF11B-202ENST00000517352 ANKARQ7Z5J8 1434 aa10.65□□□□□ -0.7
TNFRSF11B-202ENST00000517352 SLIT2O94813 1529 aa10.64□□□□□ -0.71
TNFRSF11B-202ENST00000517352 SRPK2P78362 688 aaKnown RBP10.64□□□□□ -0.71
TNFRSF11B-202ENST00000517352 PDE3BQ13370 1112 aa10.64□□□□□ -0.71
TNFRSF11B-202ENST00000517352 AMER1Q5JTC6 1135 aaPredicted RBP10.64□□□□□ -0.71
TNFRSF11B-202ENST00000517352 NUTM2GQ5VZR2 741 aa10.64□□□□□ -0.71
TNFRSF11B-202ENST00000517352 NUDT16Q96DE0 195 aaKnown RBP10.64□□□□□ -0.71
TNFRSF11B-202ENST00000517352 NRXN1Q9ULB1 1477 aa10.63□□□□□ -0.71
TNFRSF11B-202ENST00000517352 PSDA5PKW4 1024 aaPredicted RBP10.63□□□□□ -0.71
TNFRSF11B-202ENST00000517352 ZC3H6P61129 1189 aaKnown RBP10.63□□□□□ -0.71
TNFRSF11B-202ENST00000517352 ABTB2Q8N961 1025 aa10.63□□□□□ -0.71
TNFRSF11B-202ENST00000517352 CDK19Q9BWU1 502 aa10.63□□□□□ -0.71
TNFRSF11B-202ENST00000517352 ONECUT3O60422 494 aaPredicted RBP10.62□□□□□ -0.71
TNFRSF11B-202ENST00000517352 CHRNA2Q15822 529 aa10.62□□□□□ -0.71
TNFRSF11B-202ENST00000517352 EN1Q05925 392 aaPredicted RBP10.61□□□□□ -0.71
TNFRSF11B-202ENST00000517352 FAM182BQ5T319 152 aa10.61□□□□□ -0.71
TNFRSF11B-202ENST00000517352 CCDC61Q9Y6R9 512 aa10.61□□□□□ -0.71
TNFRSF11B-202ENST00000517352 USP32Q8NFA0 1604 aa10.61□□□□□ -0.71
TNFRSF11B-202ENST00000517352 FMN2Q9NZ56 1722 aa10.61□□□□□ -0.71
TNFRSF11B-202ENST00000517352 EP400Q96L91 3159 aa10.6□□□□□ -0.71
TNFRSF11B-202ENST00000517352 FAM196AQ6ZSG2 479 aa10.6□□□□□ -0.71
TNFRSF11B-202ENST00000517352 SPATA31A5Q5VU36 1347 aa10.59□□□□□ -0.71
TNFRSF11B-202ENST00000517352 SPATA31A7Q8IWB4 1347 aa10.59□□□□□ -0.71
TNFRSF11B-202ENST00000517352 KNDC1Q76NI1 1749 aa10.59□□□□□ -0.71
TNFRSF11B-202ENST00000517352 APBA3O96018 575 aa10.59□□□□□ -0.71
TNFRSF11B-202ENST00000517352 NBPF8Q3BBV2 869 aa10.59□□□□□ -0.71
TNFRSF11B-202ENST00000517352 NBPF14Q5TI25 921 aa10.59□□□□□ -0.71
TNFRSF11B-202ENST00000517352 NLRP13Q86W25 1043 aa10.59□□□□□ -0.71
TNFRSF11B-202ENST00000517352 PRR36Q9H6K5 1346 aa10.58□□□□□ -0.71
TNFRSF11B-202ENST00000517352 DLC1Q96QB1 1528 aa10.58□□□□□ -0.72
TNFRSF11B-202ENST00000517352 KIAA0232Q92628 1395 aa10.58□□□□□ -0.72
TNFRSF11B-202ENST00000517352 TRIM37O94972 964 aa10.58□□□□□ -0.72
TNFRSF11B-202ENST00000517352 HRCP23327 699 aa10.58□□□□□ -0.72
TNFRSF11B-202ENST00000517352 R3HDM1Q15032 1099 aaKnown RBP10.58□□□□□ -0.72
TNFRSF11B-202ENST00000517352 ACEP12821 1306 aa10.58□□□□□ -0.72
TNFRSF11B-202ENST00000517352 GLI3P10071 1580 aa10.57□□□□□ -0.72
TNFRSF11B-202ENST00000517352 DAXXQ9UER7 740 aaPredicted RBP10.57□□□□□ -0.72
TNFRSF11B-202ENST00000517352 TULP4Q9NRJ4 1543 aa10.57□□□□□ -0.72
TNFRSF11B-202ENST00000517352 PPP1R1BQ9UD71 204 aaPredicted RBP10.56□□□□□ -0.72
TNFRSF11B-202ENST00000517352 SPATA31A1Q5TZJ5 1347 aa10.56□□□□□ -0.72
TNFRSF11B-202ENST00000517352 IFT172Q9UG01 1749 aa10.55□□□□□ -0.72
TNFRSF11B-202ENST00000517352 MARF1Q9Y4F3 1742 aaKnown RBP10.55□□□□□ -0.72
TNFRSF11B-202ENST00000517352 NLRP6P59044 892 aa10.55□□□□□ -0.72
TNFRSF11B-202ENST00000517352 EZH2Q15910 746 aaKnown RBP10.55□□□□□ -0.72
TNFRSF11B-202ENST00000517352 TCP11L2Q8N4U5 519 aa10.55□□□□□ -0.72
TNFRSF11B-202ENST00000517352 CABP2Q9NPB3 220 aa10.55□□□□□ -0.72
TNFRSF11B-202ENST00000517352 CENPJQ9HC77 1338 aaPredicted RBP10.55□□□□□ -0.72
TNFRSF11B-202ENST00000517352 C11orf95C9JLR9 678 aaPredicted RBP10.54□□□□□ -0.72
TNFRSF11B-202ENST00000517352 CSB-PGBD3P0DP91 1061 aa10.54□□□□□ -0.72
TNFRSF11B-202ENST00000517352 TNKS1BP1Q9C0C2 1729 aaKnown RBP10.54□□□□□ -0.72
TNFRSF11B-202ENST00000517352 PLEKHG3A1L390 1219 aa10.53□□□□□ -0.72
TNFRSF11B-202ENST00000517352 SOX12O15370 315 aa10.53□□□□□ -0.72
TNFRSF11B-202ENST00000517352 NEUROD1Q13562 356 aa10.53□□□□□ -0.72
TNFRSF11B-202ENST00000517352 LARP1Q6PKG0 1096 aaKnown RBP10.53□□□□□ -0.72
TNFRSF11B-202ENST00000517352 TOM1L2Q6ZVM7 507 aa10.53□□□□□ -0.72
TNFRSF11B-202ENST00000517352 GCP02774 474 aa10.52□□□□□ -0.73
TNFRSF11B-202ENST00000517352 NBPF1Q3BBV0 1214 aa10.52□□□□□ -0.73
TNFRSF11B-202ENST00000517352 BARGINQ6ZT62 677 aa10.52□□□□□ -0.73
TNFRSF11B-202ENST00000517352 CABP1Q9NZU7 370 aa10.52□□□□□ -0.73
TNFRSF11B-202ENST00000517352 THRAP3Q9Y2W1 955 aaKnown RBP10.52□□□□□ -0.73
TNFRSF11B-202ENST00000517352 NWD2Q9ULI1 1742 aa10.52□□□□□ -0.73
TNFRSF11B-202ENST00000517352 EVC2Q86UK5 1308 aa10.52□□□□□ -0.73
TNFRSF11B-202ENST00000517352 COL14A1Q05707 1796 aaKnown RBP10.52□□□□□ -0.73
TNFRSF11B-202ENST00000517352 ADGRB1O14514 1584 aa10.52□□□□□ -0.73
TNFRSF11B-202ENST00000517352 PLCH1Q4KWH8 1693 aa10.51□□□□□ -0.73
TNFRSF11B-202ENST00000517352 ATP7BP35670 1465 aa10.51□□□□□ -0.73
TNFRSF11B-202ENST00000517352 U3KPZ7 1027 aaPredicted RBP10.51□□□□□ -0.73
TNFRSF11B-202ENST00000517352 RGPD8O14715 1765 aaPredicted RBP10.51□□□□□ -0.73
TNFRSF11B-202ENST00000517352 ADGRB2O60241 1585 aa10.51□□□□□ -0.73
TNFRSF11B-202ENST00000517352 PPIP5K1Q6PFW1 1433 aa10.5□□□□□ -0.73
TNFRSF11B-202ENST00000517352 DDB1Q16531 1140 aa10.5□□□□□ -0.73
TNFRSF11B-202ENST00000517352 KCNH5Q8NCM2 988 aa10.49□□□□□ -0.73
TNFRSF11B-202ENST00000517352 PARD3Q8TEW0 1356 aa10.49□□□□□ -0.73
TNFRSF11B-202ENST00000517352 SSH2Q76I76 1423 aa10.49□□□□□ -0.73
TNFRSF11B-202ENST00000517352 CAMKK2Q96RR4 588 aa10.48□□□□□ -0.73
TNFRSF11B-202ENST00000517352 ZNF692Q9BU19 519 aaPredicted RBP10.48□□□□□ -0.73
TNFRSF11B-202ENST00000517352 BCL11BQ9C0K0 894 aaPredicted RBP10.48□□□□□ -0.73
TNFRSF11B-202ENST00000517352 POLR3AO14802 1390 aaPredicted RBP10.48□□□□□ -0.73
TNFRSF11B-202ENST00000517352 TMC1Q8TDI8 760 aa10.47□□□□□ -0.73
TNFRSF11B-202ENST00000517352 CDCA7Q9BWT1 371 aaPredicted RBP10.47□□□□□ -0.73
TNFRSF11B-202ENST00000517352 SPON1Q9HCB6 807 aa10.47□□□□□ -0.73
TNFRSF11B-202ENST00000517352 BRD4O60885 1362 aaPredicted RBP10.47□□□□□ -0.73
TNFRSF11B-202ENST00000517352 EXOC5O00471 708 aa10.46□□□□□ -0.73
TNFRSF11B-202ENST00000517352 L3MBTL2Q969R5 705 aa10.46□□□□□ -0.73
TNFRSF11B-202ENST00000517352 ROCK2O75116 1388 aaKnown RBP10.46□□□□□ -0.74
TNFRSF11B-202ENST00000517352 CPDO75976 1380 aa10.46□□□□□ -0.74
TNFRSF11B-202ENST00000517352 BRWD3Q6RI45 1802 aa10.45□□□□□ -0.74
TNFRSF11B-202ENST00000517352 ITSN1Q15811 1721 aa10.44□□□□□ -0.74
TNFRSF11B-202ENST00000517352 CRB1P82279 1406 aa10.44□□□□□ -0.74
TNFRSF11B-202ENST00000517352 USP19O94966 1318 aa10.44□□□□□ -0.74
TNFRSF11B-202ENST00000517352 SUGP2Q8IX01 1082 aaKnown RBP eCLIP10.44□□□□□ -0.74
TNFRSF11B-202ENST00000517352 TRPM3Q9HCF6 1732 aaPredicted RBP10.44□□□□□ -0.74
TNFRSF11B-202ENST00000517352 ALS2Q96Q42 1657 aa10.44□□□□□ -0.74
TNFRSF11B-202ENST00000517352 KCNQ2O43526 872 aa10.43□□□□□ -0.74
TNFRSF11B-202ENST00000517352 YY1P25490 414 aa10.43□□□□□ -0.74
TNFRSF11B-202ENST00000517352 HDGFL2Q7Z4V5 671 aaPredicted RBP10.43□□□□□ -0.74
TNFRSF11B-202ENST00000517352 SIN3AQ96ST3 1273 aa10.43□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 11.3 ms