RNA–Protein interactions for RNA: ENST00000517276.1

SCARNA11.3-201, small Cajal body-specific RNA 11, humanhuman

BASIC

Gene SCARNA11, Length 130 nt, Biotype scaRNA, Subcellular localisation Cytoplasm, Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARNA11.3-201ENST00000517276 NR1H3Q13133 447 aa4.01□□□□□ -1.77
SCARNA11.3-201ENST00000517276 PTK7Q13308 1070 aa4.01□□□□□ -1.77
SCARNA11.3-201ENST00000517276 IER5LQ5T953 404 aa4.01□□□□□ -1.77
SCARNA11.3-201ENST00000517276 FAM200AQ8TCP9 573 aa4.01□□□□□ -1.77
SCARNA11.3-201ENST00000517276 UBXN4Q92575 508 aa4.01□□□□□ -1.77
SCARNA11.3-201ENST00000517276 KHSRPQ92945 711 aaKnown RBP eCLIP4.01□□□□□ -1.77
SCARNA11.3-201ENST00000517276 COLQQ9Y215 455 aaPredicted RBP4.01□□□□□ -1.77
SCARNA11.3-201ENST00000517276 H3BRB1 525 aa4□□□□□ -1.77
SCARNA11.3-201ENST00000517276 LGR5O75473 907 aa4□□□□□ -1.77
SCARNA11.3-201ENST00000517276 SLC10A3P09131 477 aa4□□□□□ -1.77
SCARNA11.3-201ENST00000517276 ERCC5P28715 1186 aaPredicted RBP4□□□□□ -1.77
SCARNA11.3-201ENST00000517276 USP46P62068 366 aa4□□□□□ -1.77
SCARNA11.3-201ENST00000517276 KCNH2Q12809 1159 aa4□□□□□ -1.77
SCARNA11.3-201ENST00000517276 NCOA4Q13772 614 aa4□□□□□ -1.77
SCARNA11.3-201ENST00000517276 GIMAP6Q6P9H5 292 aa4□□□□□ -1.77
SCARNA11.3-201ENST00000517276 LARP1Q6PKG0 1096 aaKnown RBP4□□□□□ -1.77
SCARNA11.3-201ENST00000517276 ZNF662Q6ZS27 426 aa4□□□□□ -1.77
SCARNA11.3-201ENST00000517276 PNMA1Q8ND90 353 aa4□□□□□ -1.77
SCARNA11.3-201ENST00000517276 TATDN2Q93075 761 aa4□□□□□ -1.77
SCARNA11.3-201ENST00000517276 TUT1Q9H6E5 874 aaKnown RBP4□□□□□ -1.77
SCARNA11.3-201ENST00000517276 CADPSQ9ULU8 1353 aa4□□□□□ -1.77
SCARNA11.3-201ENST00000517276 ANKRD62A6NC57 917 aa3.99□□□□□ -1.77
SCARNA11.3-201ENST00000517276 NBPF26B4DH59 902 aa3.99□□□□□ -1.77
SCARNA11.3-201ENST00000517276 PRMT3O60678 531 aa3.99□□□□□ -1.77
SCARNA11.3-201ENST00000517276 NUDT7P0C024 238 aa3.99□□□□□ -1.77
SCARNA11.3-201ENST00000517276 CANXP27824 592 aaKnown RBP3.99□□□□□ -1.77
SCARNA11.3-201ENST00000517276 MAPK1P28482 360 aa3.99□□□□□ -1.77
SCARNA11.3-201ENST00000517276 DPYDQ12882 1025 aa3.99□□□□□ -1.77
SCARNA11.3-201ENST00000517276 SF3A1Q15459 793 aaKnown RBP3.99□□□□□ -1.77
SCARNA11.3-201ENST00000517276 ANKMY2Q8IV38 441 aa3.99□□□□□ -1.77
SCARNA11.3-201ENST00000517276 PLEKHM2Q8IWE5 1019 aa3.99□□□□□ -1.77
SCARNA11.3-201ENST00000517276 PRIMPOLQ96LW4 560 aa3.99□□□□□ -1.77
SCARNA11.3-201ENST00000517276 CDCA7Q9BWT1 371 aaPredicted RBP3.99□□□□□ -1.77
SCARNA11.3-201ENST00000517276 PPP1R3GB7ZBB8 358 aa3.98□□□□□ -1.77
SCARNA11.3-201ENST00000517276 HDLBPQ00341 1268 aaKnown RBP3.98□□□□□ -1.77
SCARNA11.3-201ENST00000517276 ASTLQ6HA08 431 aaPredicted RBP3.98□□□□□ -1.77
SCARNA11.3-201ENST00000517276 DPH6Q7L8W6 267 aa3.98□□□□□ -1.77
SCARNA11.3-201ENST00000517276 NFATC2IPQ8NCF5 419 aa3.98□□□□□ -1.77
SCARNA11.3-201ENST00000517276 ZNF594Q96JF6 807 aaPredicted RBP3.98□□□□□ -1.77
SCARNA11.3-201ENST00000517276 DNAJC2Q99543 621 aaKnown RBP3.98□□□□□ -1.77
SCARNA11.3-201ENST00000517276 BACH2Q9BYV9 841 aa3.98□□□□□ -1.77
SCARNA11.3-201ENST00000517276 ZBBXA8MT70 800 aa3.97□□□□□ -1.77
SCARNA11.3-201ENST00000517276 SEC24BO95487 1268 aa3.97□□□□□ -1.77
SCARNA11.3-201ENST00000517276 MTMR3Q13615 1198 aa3.97□□□□□ -1.77
SCARNA11.3-201ENST00000517276 C3orf67Q6ZVT6 689 aa3.97□□□□□ -1.77
SCARNA11.3-201ENST00000517276 GLYCTKQ8IVS8 523 aa3.97□□□□□ -1.77
SCARNA11.3-201ENST00000517276 ANKRD13AQ8IZ07 590 aa3.97□□□□□ -1.77
SCARNA11.3-201ENST00000517276 HIRIP3Q9BW71 556 aaPredicted RBP3.97□□□□□ -1.77
SCARNA11.3-201ENST00000517276 POTEFA5A3E0 1075 aa3.96□□□□□ -1.78
SCARNA11.3-201ENST00000517276 TRIM6-TRIM34B2RNG4 842 aa3.96□□□□□ -1.78
SCARNA11.3-201ENST00000517276 ATP5J2-PTCD1G3V325 749 aa3.96□□□□□ -1.78
SCARNA11.3-201ENST00000517276 ICMTO60725 284 aa3.96□□□□□ -1.78
SCARNA11.3-201ENST00000517276 CLDN10P78369 228 aa3.96□□□□□ -1.78
SCARNA11.3-201ENST00000517276 FUT2Q10981 343 aa3.96□□□□□ -1.78
SCARNA11.3-201ENST00000517276 ECM1Q16610 540 aa3.96□□□□□ -1.78
SCARNA11.3-201ENST00000517276 PROX2Q3B8N5 592 aa3.96□□□□□ -1.78
SCARNA11.3-201ENST00000517276 TSGA10IPQ3SY00 556 aa3.96□□□□□ -1.78
SCARNA11.3-201ENST00000517276 SWT1Q5T5J6 900 aaKnown RBP3.96□□□□□ -1.78
SCARNA11.3-201ENST00000517276 LDLRAD1Q5T700 205 aa3.96□□□□□ -1.78
SCARNA11.3-201ENST00000517276 OGFOD1Q8N543 542 aa3.96□□□□□ -1.78
SCARNA11.3-201ENST00000517276 PLPP7Q8NBV4 271 aa3.96□□□□□ -1.78
SCARNA11.3-201ENST00000517276 PIK3R5Q8WYR1 880 aa3.96□□□□□ -1.78
SCARNA11.3-201ENST00000517276 DHX38Q92620 1227 aaKnown RBP3.96□□□□□ -1.78
SCARNA11.3-201ENST00000517276 ASB16Q96NS5 453 aa3.96□□□□□ -1.78
SCARNA11.3-201ENST00000517276 SEPT3Q9UH03 358 aa3.96□□□□□ -1.78
SCARNA11.3-201ENST00000517276 DCTN4Q9UJW0 460 aa3.96□□□□□ -1.78
SCARNA11.3-201ENST00000517276 KIAA1024Q9UPX6 916 aa3.96□□□□□ -1.78
SCARNA11.3-201ENST00000517276 RAD51AP2Q09MP3 1159 aa3.95□□□□□ -1.78
SCARNA11.3-201ENST00000517276 MRPL58Q14197 206 aaKnown RBP3.95□□□□□ -1.78
SCARNA11.3-201ENST00000517276 OCLNQ16625 522 aa3.95□□□□□ -1.78
SCARNA11.3-201ENST00000517276 EAPPQ56P03 285 aaPredicted RBP3.95□□□□□ -1.78
SCARNA11.3-201ENST00000517276 ARSIQ5FYB1 569 aa3.95□□□□□ -1.78
SCARNA11.3-201ENST00000517276 CAPN12Q6ZSI9 719 aa3.95□□□□□ -1.78
SCARNA11.3-201ENST00000517276 RNF135Q8IUD6 432 aa3.95□□□□□ -1.78
SCARNA11.3-201ENST00000517276 GAS2L2Q8NHY3 880 aa3.95□□□□□ -1.78
SCARNA11.3-201ENST00000517276 C1orf216Q8TAB5 229 aa3.95□□□□□ -1.78
SCARNA11.3-201ENST00000517276 FAM161BQ96MY7 647 aa3.95□□□□□ -1.78
SCARNA11.3-201ENST00000517276 MKNK1Q9BUB5 465 aa3.95□□□□□ -1.78
SCARNA11.3-201ENST00000517276 TANGO6Q9C0B7 1094 aa3.95□□□□□ -1.78
SCARNA11.3-201ENST00000517276 LNPKQ9C0E8 428 aa3.95□□□□□ -1.78
SCARNA11.3-201ENST00000517276 RNF19AQ9NV58 838 aa3.95□□□□□ -1.78
SCARNA11.3-201ENST00000517276 CXXC1Q9P0U4 656 aaPredicted RBP3.95□□□□□ -1.78
SCARNA11.3-201ENST00000517276 CEP126Q9P2H0 1117 aa3.95□□□□□ -1.78
SCARNA11.3-201ENST00000517276 DNMT3AQ9Y6K1 912 aaPredicted RBP3.95□□□□□ -1.78
SCARNA11.3-201ENST00000517276 SFI1A8K8P3 1242 aa3.94□□□□□ -1.78
SCARNA11.3-201ENST00000517276 DKK1O94907 266 aa3.94□□□□□ -1.78
SCARNA11.3-201ENST00000517276 P4HBP07237 508 aaKnown RBP3.94□□□□□ -1.78
SCARNA11.3-201ENST00000517276 NCLP19338 710 aaKnown RBP3.94□□□□□ -1.78
SCARNA11.3-201ENST00000517276 SWI5Q1ZZU3 235 aa3.94□□□□□ -1.78
SCARNA11.3-201ENST00000517276 SLFNL1Q499Z3 407 aa3.94□□□□□ -1.78
SCARNA11.3-201ENST00000517276 TAS1R3Q7RTX0 852 aa3.94□□□□□ -1.78
SCARNA11.3-201ENST00000517276 PACS2Q86VP3 889 aa3.94□□□□□ -1.78
SCARNA11.3-201ENST00000517276 PHTF2Q8N3S3 785 aa3.94□□□□□ -1.78
SCARNA11.3-201ENST00000517276 GTF3C2Q8WUA4 911 aaPredicted RBP3.94□□□□□ -1.78
SCARNA11.3-201ENST00000517276 DNAAF2Q9NVR5 837 aaKnown RBP3.94□□□□□ -1.78
SCARNA11.3-201ENST00000517276 EGFL7Q9UHF1 273 aa3.94□□□□□ -1.78
SCARNA11.3-201ENST00000517276 FKBPLQ9UIM3 349 aa3.94□□□□□ -1.78
SCARNA11.3-201ENST00000517276 BRPF3Q9ULD4 1205 aa3.94□□□□□ -1.78
SCARNA11.3-201ENST00000517276 IQSEC3Q9UPP2 1182 aaPredicted RBP3.94□□□□□ -1.78
SCARNA11.3-201ENST00000517276 ZC3H4Q9UPT8 1303 aaKnown RBP3.94□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 11.8 ms