RNA–Protein interactions for RNA: ENST00000517239.1

RNU4-60P-201, Transcript of RNA, U4 small nuclear 60, pseudogene, humanhuman

BASIC

Gene RNU4-60P, Length 135 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU4-60P-201ENST00000517239 CERKQ8TCT0 537 aa5.56□□□□□ -1.52
RNU4-60P-201ENST00000517239 PRKAG2Q9UGJ0 569 aa5.56□□□□□ -1.52
RNU4-60P-201ENST00000517239 RIPOR2Q9Y4F9 1068 aa5.56□□□□□ -1.52
RNU4-60P-201ENST00000517239 TTLL13PA6NNM8 815 aa5.55□□□□□ -1.52
RNU4-60P-201ENST00000517239 LZTS3O60299 673 aaPredicted RBP5.55□□□□□ -1.52
RNU4-60P-201ENST00000517239 FDX1P10109 184 aa5.55□□□□□ -1.52
RNU4-60P-201ENST00000517239 ATP2B1P20020 1258 aa5.55□□□□□ -1.52
RNU4-60P-201ENST00000517239 ZNF211Q13398 564 aaPredicted RBP5.55□□□□□ -1.52
RNU4-60P-201ENST00000517239 NR6A1Q15406 480 aa5.55□□□□□ -1.52
RNU4-60P-201ENST00000517239 SDE2Q6IQ49 451 aa5.55□□□□□ -1.52
RNU4-60P-201ENST00000517239 TTC13Q8NBP0 860 aa5.55□□□□□ -1.52
RNU4-60P-201ENST00000517239 ASB16Q96NS5 453 aa5.55□□□□□ -1.52
RNU4-60P-201ENST00000517239 IQSEC3Q9UPP2 1182 aaPredicted RBP5.55□□□□□ -1.52
RNU4-60P-201ENST00000517239 USP17L5A8MUK1 530 aa5.54□□□□□ -1.52
RNU4-60P-201ENST00000517239 H3BRB1 525 aa5.54□□□□□ -1.52
RNU4-60P-201ENST00000517239 TPD52L2O43399 206 aaKnown RBP5.54□□□□□ -1.52
RNU4-60P-201ENST00000517239 PTK7Q13308 1070 aa5.54□□□□□ -1.52
RNU4-60P-201ENST00000517239 GLYCTKQ8IVS8 523 aa5.54□□□□□ -1.52
RNU4-60P-201ENST00000517239 LARGE2Q8N3Y3 721 aa5.54□□□□□ -1.52
RNU4-60P-201ENST00000517239 NFATC2IPQ8NCF5 419 aa5.54□□□□□ -1.52
RNU4-60P-201ENST00000517239 PMFBP1Q8TBY8 1022 aa5.54□□□□□ -1.52
RNU4-60P-201ENST00000517239 PTCD2Q8WV60 388 aaKnown RBP5.54□□□□□ -1.52
RNU4-60P-201ENST00000517239 VTI1AQ96AJ9 217 aa5.54□□□□□ -1.52
RNU4-60P-201ENST00000517239 MS4A3Q96HJ5 214 aa5.54□□□□□ -1.52
RNU4-60P-201ENST00000517239 GPATCH3Q96I76 525 aa5.54□□□□□ -1.52
RNU4-60P-201ENST00000517239 TUT1Q9H6E5 874 aaKnown RBP5.54□□□□□ -1.52
RNU4-60P-201ENST00000517239 MYH16Q9H6N6 1097 aa5.54□□□□□ -1.52
RNU4-60P-201ENST00000517239 PRDM16Q9HAZ2 1276 aa5.54□□□□□ -1.52
RNU4-60P-201ENST00000517239 CAPN10Q9HC96 672 aa5.54□□□□□ -1.52
RNU4-60P-201ENST00000517239 hCG_2014768A0A024R1R8 64 aa5.53□□□□□ -1.52
RNU4-60P-201ENST00000517239 RAD51AP2Q09MP3 1159 aa5.53□□□□□ -1.52
RNU4-60P-201ENST00000517239 PTPROQ16827 1216 aa5.53□□□□□ -1.52
RNU4-60P-201ENST00000517239 C6orf132Q5T0Z8 1188 aa5.53□□□□□ -1.52
RNU4-60P-201ENST00000517239 EGFLAMQ63HQ2 1017 aa5.53□□□□□ -1.52
RNU4-60P-201ENST00000517239 TMEM92Q6UXU6 159 aa5.53□□□□□ -1.52
RNU4-60P-201ENST00000517239 NT5DC4Q86YG4 428 aa5.53□□□□□ -1.52
RNU4-60P-201ENST00000517239 ANKMY2Q8IV38 441 aa5.53□□□□□ -1.52
RNU4-60P-201ENST00000517239 PLEKHM2Q8IWE5 1019 aa5.53□□□□□ -1.52
RNU4-60P-201ENST00000517239 SLF2Q8IX21 1173 aa5.53□□□□□ -1.52
RNU4-60P-201ENST00000517239 PDCD7Q8N8D1 485 aaKnown RBP5.53□□□□□ -1.52
RNU4-60P-201ENST00000517239 TMEM87AQ8NBN3 555 aa5.53□□□□□ -1.52
RNU4-60P-201ENST00000517239 RDH13Q8NBN7 331 aa5.53□□□□□ -1.52
RNU4-60P-201ENST00000517239 SPACA7Q96KW9 195 aa5.53□□□□□ -1.52
RNU4-60P-201ENST00000517239 SLC52A1Q9NWF4 448 aa5.53□□□□□ -1.52
RNU4-60P-201ENST00000517239 PCDHGC3Q9UN70 934 aa5.53□□□□□ -1.52
RNU4-60P-201ENST00000517239 SUGT1Q9Y2Z0 365 aa5.53□□□□□ -1.52
RNU4-60P-201ENST00000517239 ICMTO60725 284 aa5.52□□□□□ -1.53
RNU4-60P-201ENST00000517239 IBSPP21815 317 aaPredicted RBP5.52□□□□□ -1.53
RNU4-60P-201ENST00000517239 TIE1P35590 1138 aa5.52□□□□□ -1.53
RNU4-60P-201ENST00000517239 PRSS12P56730 875 aa5.52□□□□□ -1.53
RNU4-60P-201ENST00000517239 GUCA2AQ02747 115 aa5.52□□□□□ -1.53
RNU4-60P-201ENST00000517239 DPYDQ12882 1025 aa5.52□□□□□ -1.53
RNU4-60P-201ENST00000517239 MTMR2Q13614 643 aa5.52□□□□□ -1.53
RNU4-60P-201ENST00000517239 METTL14Q9HCE5 456 aaKnown RBP5.52□□□□□ -1.53
RNU4-60P-201ENST00000517239 RBM27Q9P2N5 1060 aaKnown RBP5.52□□□□□ -1.53
RNU4-60P-201ENST00000517239 EGFL7Q9UHF1 273 aa5.52□□□□□ -1.53
RNU4-60P-201ENST00000517239 DCTN4Q9UJW0 460 aa5.52□□□□□ -1.53
RNU4-60P-201ENST00000517239 TRIM35Q9UPQ4 493 aa5.52□□□□□ -1.53
RNU4-60P-201ENST00000517239 PPP1R3GB7ZBB8 358 aa5.51□□□□□ -1.53
RNU4-60P-201ENST00000517239 CFAP99D6REC4 459 aa5.51□□□□□ -1.53
RNU4-60P-201ENST00000517239 PRMT3O60678 531 aa5.51□□□□□ -1.53
RNU4-60P-201ENST00000517239 NR1H3Q13133 447 aa5.51□□□□□ -1.53
RNU4-60P-201ENST00000517239 MRPL58Q14197 206 aaKnown RBP5.51□□□□□ -1.53
RNU4-60P-201ENST00000517239 COL19A1Q14993 1142 aa5.51□□□□□ -1.53
RNU4-60P-201ENST00000517239 GORABQ5T7V8 394 aa5.51□□□□□ -1.53
RNU4-60P-201ENST00000517239 SLC43A3Q8NBI5 491 aa5.51□□□□□ -1.53
RNU4-60P-201ENST00000517239 C1orf216Q8TAB5 229 aa5.51□□□□□ -1.53
RNU4-60P-201ENST00000517239 PIF1Q9H611 641 aa5.51□□□□□ -1.53
RNU4-60P-201ENST00000517239 ZSWIM4Q9H7M6 989 aa5.51□□□□□ -1.53
RNU4-60P-201ENST00000517239 BCCIPQ9P287 314 aaKnown RBP eCLIP5.51□□□□□ -1.53
RNU4-60P-201ENST00000517239 ATP5J2-PTCD1G3V325 749 aa5.5□□□□□ -1.53
RNU4-60P-201ENST00000517239 HOXA2O43364 376 aa5.5□□□□□ -1.53
RNU4-60P-201ENST00000517239 ANAPC15P60006 121 aa5.5□□□□□ -1.53
RNU4-60P-201ENST00000517239 USP46P62068 366 aa5.5□□□□□ -1.53
RNU4-60P-201ENST00000517239 SWI5Q1ZZU3 235 aa5.5□□□□□ -1.53
RNU4-60P-201ENST00000517239 LDLRAD1Q5T700 205 aa5.5□□□□□ -1.53
RNU4-60P-201ENST00000517239 METTL16Q86W50 562 aaKnown RBP5.5□□□□□ -1.53
RNU4-60P-201ENST00000517239 FAM174AQ8TBP5 190 aa5.5□□□□□ -1.53
RNU4-60P-201ENST00000517239 CDCA7LQ96GN5 454 aa5.5□□□□□ -1.53
RNU4-60P-201ENST00000517239 PRIMPOLQ96LW4 560 aa5.5□□□□□ -1.53
RNU4-60P-201ENST00000517239 EYA1Q99502 592 aa5.5□□□□□ -1.53
RNU4-60P-201ENST00000517239 TINF2Q9BSI4 451 aa5.5□□□□□ -1.53
RNU4-60P-201ENST00000517239 CCSER2Q9H7U1 834 aa5.5□□□□□ -1.53
RNU4-60P-201ENST00000517239 KLHL42Q9P2K6 505 aa5.5□□□□□ -1.53
RNU4-60P-201ENST00000517239 C6orf229H3BNL8 230 aa5.49□□□□□ -1.53
RNU4-60P-201ENST00000517239 CD44P16070 742 aaKnown RBP5.49□□□□□ -1.53
RNU4-60P-201ENST00000517239 XPCQ01831 940 aaPredicted RBP5.49□□□□□ -1.53
RNU4-60P-201ENST00000517239 NCOA4Q13772 614 aa5.49□□□□□ -1.53
RNU4-60P-201ENST00000517239 CCDC181Q5TID7 509 aa5.49□□□□□ -1.53
RNU4-60P-201ENST00000517239 EXOC8Q8IYI6 725 aa5.49□□□□□ -1.53
RNU4-60P-201ENST00000517239 KCNB2Q92953 911 aa5.49□□□□□ -1.53
RNU4-60P-201ENST00000517239 HLA-CQ95604 372 aa5.49□□□□□ -1.53
RNU4-60P-201ENST00000517239 TGIF2Q9GZN2 237 aa5.49□□□□□ -1.53
RNU4-60P-201ENST00000517239 NLRP2Q9NX02 1062 aa5.49□□□□□ -1.53
RNU4-60P-201ENST00000517239 TBX22Q9Y458 520 aa5.49□□□□□ -1.53
RNU4-60P-201ENST00000517239 C21orf2O43822 256 aa5.48□□□□□ -1.53
RNU4-60P-201ENST00000517239 MAP4K4O95819 1239 aaPredicted RBP5.48□□□□□ -1.53
RNU4-60P-201ENST00000517239 P4HBP07237 508 aaKnown RBP5.48□□□□□ -1.53
RNU4-60P-201ENST00000517239 FBXO45P0C2W1 286 aa5.48□□□□□ -1.53
RNU4-60P-201ENST00000517239 DNAJA1P31689 397 aaKnown RBP5.48□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 11.6 ms