RNA–Protein interactions for RNA: ENST00000517097.1

SCARNA3-201, small Cajal body-specific RNA 3, humanhuman

BASIC

Gene SCARNA3, Length 143 nt, Biotype scaRNA, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARNA3-201ENST00000517097 PHLDB3Q6NSJ2 640 aa3.98□□□□□ -1.77
SCARNA3-201ENST00000517097 NUDT18Q6ZVK8 323 aa3.98□□□□□ -1.77
SCARNA3-201ENST00000517097 RDH13Q8NBN7 331 aa3.98□□□□□ -1.77
SCARNA3-201ENST00000517097 ZFRQ96KR1 1074 aaKnown RBP3.98□□□□□ -1.77
SCARNA3-201ENST00000517097 TMEM134Q9H6X4 195 aa3.98□□□□□ -1.77
SCARNA3-201ENST00000517097 ZMIZ1Q9ULJ6 1067 aa3.98□□□□□ -1.77
SCARNA3-201ENST00000517097 PCDHGC3Q9UN70 934 aa3.98□□□□□ -1.77
SCARNA3-201ENST00000517097 C3orf80F5H4A9 247 aa3.97□□□□□ -1.77
SCARNA3-201ENST00000517097 ZNF16P17020 682 aaPredicted RBP3.97□□□□□ -1.77
SCARNA3-201ENST00000517097 ARID4AP29374 1257 aaPredicted RBP3.97□□□□□ -1.77
SCARNA3-201ENST00000517097 USP46P62068 366 aa3.97□□□□□ -1.77
SCARNA3-201ENST00000517097 GUCA2AQ02747 115 aa3.97□□□□□ -1.77
SCARNA3-201ENST00000517097 NOM1Q5C9Z4 860 aaKnown RBP3.97□□□□□ -1.77
SCARNA3-201ENST00000517097 FAM177A1Q8N128 213 aaPredicted RBP3.97□□□□□ -1.77
SCARNA3-201ENST00000517097 HELBQ8NG08 1087 aaPredicted RBP3.97□□□□□ -1.77
SCARNA3-201ENST00000517097 STK32AQ8WU08 396 aa3.97□□□□□ -1.77
SCARNA3-201ENST00000517097 TSC1Q92574 1164 aa3.97□□□□□ -1.77
SCARNA3-201ENST00000517097 SIRT1Q96EB6 747 aa3.97□□□□□ -1.77
SCARNA3-201ENST00000517097 WBP1LQ9NX94 342 aa3.97□□□□□ -1.77
SCARNA3-201ENST00000517097 TSKSQ9UJT2 592 aa3.97□□□□□ -1.77
SCARNA3-201ENST00000517097 ITGBL1O95965 494 aaPredicted RBP3.96□□□□□ -1.78
SCARNA3-201ENST00000517097 MTMR2Q13614 643 aa3.96□□□□□ -1.78
SCARNA3-201ENST00000517097 FAM98CQ17RN3 349 aaKnown RBP3.96□□□□□ -1.78
SCARNA3-201ENST00000517097 BCL2L13Q9BXK5 485 aa3.96□□□□□ -1.78
SCARNA3-201ENST00000517097 NOVA2Q9UNW9 492 aaKnown RBP3.96□□□□□ -1.78
SCARNA3-201ENST00000517097 SOWAHDA6NJG2 315 aa3.95□□□□□ -1.78
SCARNA3-201ENST00000517097 CFAP99D6REC4 459 aa3.95□□□□□ -1.78
SCARNA3-201ENST00000517097 TCF3P15923 654 aa3.95□□□□□ -1.78
SCARNA3-201ENST00000517097 SSFA2P28290 1259 aa3.95□□□□□ -1.78
SCARNA3-201ENST00000517097 GCGRP47871 477 aa3.95□□□□□ -1.78
SCARNA3-201ENST00000517097 EIF4G2P78344 907 aaKnown RBP eCLIP3.95□□□□□ -1.78
SCARNA3-201ENST00000517097 NR6A1Q15406 480 aa3.95□□□□□ -1.78
SCARNA3-201ENST00000517097 SLF2Q8IX21 1173 aa3.95□□□□□ -1.78
SCARNA3-201ENST00000517097 TATDN2Q93075 761 aa3.95□□□□□ -1.78
SCARNA3-201ENST00000517097 HLA-CQ95604 372 aa3.95□□□□□ -1.78
SCARNA3-201ENST00000517097 PNMA3Q9UL41 463 aa3.95□□□□□ -1.78
SCARNA3-201ENST00000517097 NBPF26B4DH59 902 aa3.94□□□□□ -1.78
SCARNA3-201ENST00000517097 SMAPO00193 183 aa3.94□□□□□ -1.78
SCARNA3-201ENST00000517097 PIK3CDO00329 1044 aa3.94□□□□□ -1.78
SCARNA3-201ENST00000517097 RGS20O76081 388 aa3.94□□□□□ -1.78
SCARNA3-201ENST00000517097 MARSP56192 900 aaKnown RBP3.94□□□□□ -1.78
SCARNA3-201ENST00000517097 CCDC125Q86Z20 511 aa3.94□□□□□ -1.78
SCARNA3-201ENST00000517097 PNMA1Q8ND90 353 aa3.94□□□□□ -1.78
SCARNA3-201ENST00000517097 GIPC2Q8TF65 315 aa3.94□□□□□ -1.78
SCARNA3-201ENST00000517097 CDKN2AIPQ9NXV6 580 aaPredicted RBP3.94□□□□□ -1.78
SCARNA3-201ENST00000517097 SLAIN2Q9P270 581 aa3.94□□□□□ -1.78
SCARNA3-201ENST00000517097 HPS5Q9UPZ3 1129 aa3.94□□□□□ -1.78
SCARNA3-201ENST00000517097 USP17L3A6NCW0 530 aa3.93□□□□□ -1.78
SCARNA3-201ENST00000517097 USP17L4A6NCW7 530 aa3.93□□□□□ -1.78
SCARNA3-201ENST00000517097 FAM196BA6NMK8 535 aa3.93□□□□□ -1.78
SCARNA3-201ENST00000517097 SKIP12755 728 aa3.93□□□□□ -1.78
SCARNA3-201ENST00000517097 SERPINB4P48594 390 aa3.93□□□□□ -1.78
SCARNA3-201ENST00000517097 NR1H3Q13133 447 aa3.93□□□□□ -1.78
SCARNA3-201ENST00000517097 USP17L2Q6R6M4 530 aa3.93□□□□□ -1.78
SCARNA3-201ENST00000517097 NYAP1Q6ZVC0 841 aa3.93□□□□□ -1.78
SCARNA3-201ENST00000517097 USP17L1Q7RTZ2 530 aa3.93□□□□□ -1.78
SCARNA3-201ENST00000517097 PACS2Q86VP3 889 aa3.93□□□□□ -1.78
SCARNA3-201ENST00000517097 LRCH3Q96II8 777 aa3.93□□□□□ -1.78
SCARNA3-201ENST00000517097 DRC1Q96MC2 740 aa3.93□□□□□ -1.78
SCARNA3-201ENST00000517097 C8orf37Q96NL8 207 aa3.93□□□□□ -1.78
SCARNA3-201ENST00000517097 TSR3Q9UJK0 312 aaKnown RBP3.93□□□□□ -1.78
SCARNA3-201ENST00000517097 USP17L15C9J2P7 530 aa3.92□□□□□ -1.78
SCARNA3-201ENST00000517097 USP17L10C9JJH3 530 aa3.92□□□□□ -1.78
SCARNA3-201ENST00000517097 USP17L13C9JLJ4 530 aa3.92□□□□□ -1.78
SCARNA3-201ENST00000517097 USP17L12C9JPN9 530 aa3.92□□□□□ -1.78
SCARNA3-201ENST00000517097 USP17L11C9JVI0 530 aa3.92□□□□□ -1.78
SCARNA3-201ENST00000517097 USP17L21D6R901 530 aa3.92□□□□□ -1.78
SCARNA3-201ENST00000517097 USP17L18D6R9N7 530 aa3.92□□□□□ -1.78
SCARNA3-201ENST00000517097 USP17L22D6RA61 530 aa3.92□□□□□ -1.78
SCARNA3-201ENST00000517097 USP17L17D6RBQ6 530 aa3.92□□□□□ -1.78
SCARNA3-201ENST00000517097 USP17L19D6RCP7 530 aa3.92□□□□□ -1.78
SCARNA3-201ENST00000517097 USP17L20D6RJB6 530 aa3.92□□□□□ -1.78
SCARNA3-201ENST00000517097 C6orf229H3BNL8 230 aa3.92□□□□□ -1.78
SCARNA3-201ENST00000517097 PER1O15534 1290 aaPredicted RBP3.92□□□□□ -1.78
SCARNA3-201ENST00000517097 FAM69CQ0P6D2 419 aa3.92□□□□□ -1.78
SCARNA3-201ENST00000517097 USP17L24Q0WX57 530 aa3.92□□□□□ -1.78
SCARNA3-201ENST00000517097 CRTC2Q53ET0 693 aaPredicted RBP3.92□□□□□ -1.78
SCARNA3-201ENST00000517097 SAMD7Q7Z3H4 446 aa3.92□□□□□ -1.78
SCARNA3-201ENST00000517097 NPAS4Q8IUM7 802 aa3.92□□□□□ -1.78
SCARNA3-201ENST00000517097 PLEKHM2Q8IWE5 1019 aa3.92□□□□□ -1.78
SCARNA3-201ENST00000517097 NFATC2IPQ8NCF5 419 aa3.92□□□□□ -1.78
SCARNA3-201ENST00000517097 CLP1Q92989 425 aaKnown RBP3.92□□□□□ -1.78
SCARNA3-201ENST00000517097 IRX2Q9BZI1 471 aaPredicted RBP3.92□□□□□ -1.78
SCARNA3-201ENST00000517097 BIN2Q9UBW5 565 aaPredicted RBP3.92□□□□□ -1.78
SCARNA3-201ENST00000517097 ANKRD33BA6NCL7 494 aa3.91□□□□□ -1.78
SCARNA3-201ENST00000517097 USP17L5A8MUK1 530 aa3.91□□□□□ -1.78
SCARNA3-201ENST00000517097 SLC10A3P09131 477 aa3.91□□□□□ -1.78
SCARNA3-201ENST00000517097 FBXO45P0C2W1 286 aa3.91□□□□□ -1.78
SCARNA3-201ENST00000517097 ATP2B4P23634 1241 aa3.91□□□□□ -1.78
SCARNA3-201ENST00000517097 KCNC4Q03721 635 aa3.91□□□□□ -1.78
SCARNA3-201ENST00000517097 PTK7Q13308 1070 aa3.91□□□□□ -1.78
SCARNA3-201ENST00000517097 LARP1Q6PKG0 1096 aaKnown RBP3.91□□□□□ -1.78
SCARNA3-201ENST00000517097 SREK1Q8WXA9 508 aaKnown RBP3.91□□□□□ -1.78
SCARNA3-201ENST00000517097 CDCA7Q9BWT1 371 aaPredicted RBP3.91□□□□□ -1.78
SCARNA3-201ENST00000517097 MKRN1Q9UHC7 482 aaKnown RBP3.91□□□□□ -1.78
SCARNA3-201ENST00000517097 VAMP1P23763 118 aa3.9□□□□□ -1.79
SCARNA3-201ENST00000517097 PPP4CP60510 307 aa3.9□□□□□ -1.79
SCARNA3-201ENST00000517097 GRIPAP1Q4V328 841 aa3.9□□□□□ -1.79
SCARNA3-201ENST00000517097 ZNF326Q5BKZ1 582 aaKnown RBP3.9□□□□□ -1.79
SCARNA3-201ENST00000517097 DEPDC4Q8N2C3 294 aa3.9□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms