RNA–Protein interactions for RNA: ENST00000516911.1

RNU6-1258P-201, Transcript of RNA, U6 small nuclear 1258, pseudogene, humanhuman

BASIC

Gene RNU6-1258P, Length 111 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-1258P-201ENST00000516911 MAP2K5Q13163 448 aa3.38□□□□□ -1.87
RNU6-1258P-201ENST00000516911 PTPRNQ16849 979 aa3.38□□□□□ -1.87
RNU6-1258P-201ENST00000516911 HLA-CQ95604 372 aa3.38□□□□□ -1.87
RNU6-1258P-201ENST00000516911 EVA1BQ9NVM1 165 aa3.38□□□□□ -1.87
RNU6-1258P-201ENST00000516911 TLL2Q9Y6L7 1015 aa3.38□□□□□ -1.87
RNU6-1258P-201ENST00000516911 SPDYE5A6NIY4 337 aa3.37□□□□□ -1.87
RNU6-1258P-201ENST00000516911 IRF6O14896 467 aa3.37□□□□□ -1.87
RNU6-1258P-201ENST00000516911 PPFIA3O75145 1194 aa3.37□□□□□ -1.87
RNU6-1258P-201ENST00000516911 ZIC2O95409 532 aaPredicted RBP3.37□□□□□ -1.87
RNU6-1258P-201ENST00000516911 IGHA1P01876 353 aa3.37□□□□□ -1.87
RNU6-1258P-201ENST00000516911 GPAT2Q6NUI2 795 aa3.37□□□□□ -1.87
RNU6-1258P-201ENST00000516911 MPNDQ8N594 471 aa3.37□□□□□ -1.87
RNU6-1258P-201ENST00000516911 ZNF511Q8NB15 262 aa3.37□□□□□ -1.87
RNU6-1258P-201ENST00000516911 CNTNAP3BQ96NU0 1288 aa3.37□□□□□ -1.87
RNU6-1258P-201ENST00000516911 CNTNAP3Q9BZ76 1288 aa3.37□□□□□ -1.87
RNU6-1258P-201ENST00000516911 GPCPD1Q9NPB8 672 aa3.37□□□□□ -1.87
RNU6-1258P-201ENST00000516911 MINK1Q8N4C8 1332 aaPredicted RBP3.37□□□□□ -1.87
RNU6-1258P-201ENST00000516911 VSIG8P0DPA2 414 aa3.36□□□□□ -1.87
RNU6-1258P-201ENST00000516911 TIMP2P16035 220 aa3.36□□□□□ -1.87
RNU6-1258P-201ENST00000516911 FOXK2Q01167 660 aa3.36□□□□□ -1.87
RNU6-1258P-201ENST00000516911 NR5A1Q13285 461 aa3.36□□□□□ -1.87
RNU6-1258P-201ENST00000516911 SVOPQ8N4V2 548 aa3.36□□□□□ -1.87
RNU6-1258P-201ENST00000516911 RTN4Q9NQC3 1192 aaKnown RBP3.36□□□□□ -1.87
RNU6-1258P-201ENST00000516911 ADAMTS8Q9UP79 889 aa3.36□□□□□ -1.87
RNU6-1258P-201ENST00000516911 GPR37O15354 613 aa3.35□□□□□ -1.87
RNU6-1258P-201ENST00000516911 IRS1P35568 1242 aa3.35□□□□□ -1.87
RNU6-1258P-201ENST00000516911 ZNF800Q2TB10 664 aaPredicted RBP eCLIP3.35□□□□□ -1.87
RNU6-1258P-201ENST00000516911 PRR7Q8TB68 274 aa3.35□□□□□ -1.87
RNU6-1258P-201ENST00000516911 SCARF2Q96GP6 870 aaPredicted RBP3.35□□□□□ -1.87
RNU6-1258P-201ENST00000516911 MAP3K10Q02779 954 aa3.34□□□□□ -1.87
RNU6-1258P-201ENST00000516911 MTMR2Q13614 643 aa3.34□□□□□ -1.87
RNU6-1258P-201ENST00000516911 KANK3Q6NY19 840 aa3.34□□□□□ -1.87
RNU6-1258P-201ENST00000516911 BPHLQ86WA6 291 aaPredicted RBP3.34□□□□□ -1.87
RNU6-1258P-201ENST00000516911 TSEN34Q9BSV6 310 aaKnown RBP3.34□□□□□ -1.87
RNU6-1258P-201ENST00000516911 ZFAND3Q9H8U3 227 aa3.34□□□□□ -1.87
RNU6-1258P-201ENST00000516911 DNMT3AQ9Y6K1 912 aaPredicted RBP3.34□□□□□ -1.87
RNU6-1258P-201ENST00000516911 CDC14CA4D256 554 aa3.33□□□□□ -1.88
RNU6-1258P-201ENST00000516911 SSTR3P32745 418 aaPredicted RBP3.33□□□□□ -1.88
RNU6-1258P-201ENST00000516911 DIXDC1Q155Q3 683 aa3.33□□□□□ -1.88
RNU6-1258P-201ENST00000516911 DESI1Q6ICB0 168 aa3.33□□□□□ -1.88
RNU6-1258P-201ENST00000516911 LINC00528Q8N1L1 170 aa3.33□□□□□ -1.88
RNU6-1258P-201ENST00000516911 ARMC2Q8NEN0 867 aa3.33□□□□□ -1.88
RNU6-1258P-201ENST00000516911 ITPKCQ96DU7 683 aa3.33□□□□□ -1.88
RNU6-1258P-201ENST00000516911 COL25A1Q9BXS0 654 aaPredicted RBP3.33□□□□□ -1.88
RNU6-1258P-201ENST00000516911 ENAMQ9NRM1 1142 aa3.33□□□□□ -1.88
RNU6-1258P-201ENST00000516911 FAM217BQ9NTX9 383 aaPredicted RBP3.33□□□□□ -1.88
RNU6-1258P-201ENST00000516911 FIGNL2A6NMB9 653 aa3.32□□□□□ -1.88
RNU6-1258P-201ENST00000516911 TTLL8A6PVC2 850 aa3.32□□□□□ -1.88
RNU6-1258P-201ENST00000516911 NDUFV2P19404 249 aa3.32□□□□□ -1.88
RNU6-1258P-201ENST00000516911 TTLL12Q14166 644 aaPredicted RBP3.32□□□□□ -1.88
RNU6-1258P-201ENST00000516911 SV2AQ7L0J3 742 aa3.32□□□□□ -1.88
RNU6-1258P-201ENST00000516911 VASH1Q7L8A9 365 aaPredicted RBP3.32□□□□□ -1.88
RNU6-1258P-201ENST00000516911 SPIRE2Q8WWL2 714 aa3.32□□□□□ -1.88
RNU6-1258P-201ENST00000516911 TSC1Q92574 1164 aa3.32□□□□□ -1.88
RNU6-1258P-201ENST00000516911 CCDC102AQ96A19 550 aa3.32□□□□□ -1.88
RNU6-1258P-201ENST00000516911 CDK15Q96Q40 435 aa3.32□□□□□ -1.88
RNU6-1258P-201ENST00000516911 PGPEP1Q9NXJ5 209 aa3.32□□□□□ -1.88
RNU6-1258P-201ENST00000516911 EMILIN1Q9Y6C2 1016 aa3.32□□□□□ -1.88
RNU6-1258P-201ENST00000516911 SOS2Q07890 1332 aaPredicted RBP3.31□□□□□ -1.88
RNU6-1258P-201ENST00000516911 MOXD2PA6NHM9 499 aa3.31□□□□□ -1.88
RNU6-1258P-201ENST00000516911 PHF20L1A8MW92 1017 aa3.31□□□□□ -1.88
RNU6-1258P-201ENST00000516911 PTSQ03393 145 aa3.31□□□□□ -1.88
RNU6-1258P-201ENST00000516911 PODNQ7Z5L7 613 aa3.31□□□□□ -1.88
RNU6-1258P-201ENST00000516911 VWA5B2Q8N398 1253 aa3.31□□□□□ -1.88
RNU6-1258P-201ENST00000516911 GALNT6Q8NCL4 622 aa3.31□□□□□ -1.88
RNU6-1258P-201ENST00000516911 FOXJ1Q92949 421 aa3.31□□□□□ -1.88
RNU6-1258P-201ENST00000516911 PCDHGC3Q9UN70 934 aa3.31□□□□□ -1.88
RNU6-1258P-201ENST00000516911 KDM2AQ9Y2K7 1162 aa3.31□□□□□ -1.88
RNU6-1258P-201ENST00000516911 NUTM2BA6NNL0 878 aaPredicted RBP3.3□□□□□ -1.88
RNU6-1258P-201ENST00000516911 NUTM2EB1AL46 878 aaPredicted RBP3.3□□□□□ -1.88
RNU6-1258P-201ENST00000516911 MSTNO14793 375 aa3.3□□□□□ -1.88
RNU6-1258P-201ENST00000516911 NUTM2DQ5VT03 806 aaPredicted RBP3.3□□□□□ -1.88
RNU6-1258P-201ENST00000516911 LYPD8Q6UX82 237 aa3.3□□□□□ -1.88
RNU6-1258P-201ENST00000516911 NUTM2AQ8IVF1 878 aaPredicted RBP3.3□□□□□ -1.88
RNU6-1258P-201ENST00000516911 CCDC116Q8IYX3 515 aa3.3□□□□□ -1.88
RNU6-1258P-201ENST00000516911 MEIOBQ8N635 442 aa3.3□□□□□ -1.88
RNU6-1258P-201ENST00000516911 CCDC155Q8N6L0 562 aa3.3□□□□□ -1.88
RNU6-1258P-201ENST00000516911 KLF16Q9BXK1 252 aaPredicted RBP3.3□□□□□ -1.88
RNU6-1258P-201ENST00000516911 ZBTB3Q9H5J0 574 aa3.3□□□□□ -1.88
RNU6-1258P-201ENST00000516911 DNMT3LQ9UJW3 386 aa3.3□□□□□ -1.88
RNU6-1258P-201ENST00000516911 MAGEB6P1A0A0J9YX57 407 aa3.29□□□□□ -1.88
RNU6-1258P-201ENST00000516911 FSHRP23945 695 aa3.29□□□□□ -1.88
RNU6-1258P-201ENST00000516911 NBPF14Q5TI25 921 aa3.29□□□□□ -1.88
RNU6-1258P-201ENST00000516911 ZNF385CQ66K41 422 aaPredicted RBP3.29□□□□□ -1.88
RNU6-1258P-201ENST00000516911 FOXR1Q6PIV2 292 aa3.29□□□□□ -1.88
RNU6-1258P-201ENST00000516911 GPR161Q8N6U8 529 aaKnown RBP3.29□□□□□ -1.88
RNU6-1258P-201ENST00000516911 BEND7Q8N7W2 519 aaPredicted RBP3.29□□□□□ -1.88
RNU6-1258P-201ENST00000516911 NEDD1Q8NHV4 660 aa3.29□□□□□ -1.88
RNU6-1258P-201ENST00000516911 NANOS1Q8WY41 292 aaKnown RBP3.29□□□□□ -1.88
RNU6-1258P-201ENST00000516911 TRIM52Q96A61 297 aa3.29□□□□□ -1.88
RNU6-1258P-201ENST00000516911 NR3C2P08235 984 aa3.28□□□□□ -1.88
RNU6-1258P-201ENST00000516911 GRM5P41594 1212 aa3.28□□□□□ -1.88
RNU6-1258P-201ENST00000516911 GSK3AP49840 483 aa3.28□□□□□ -1.88
RNU6-1258P-201ENST00000516911 DHX9Q08211 1270 aaKnown RBP3.28□□□□□ -1.88
RNU6-1258P-201ENST00000516911 BEGAINQ9BUH8 593 aa3.28□□□□□ -1.88
RNU6-1258P-201ENST00000516911 POLMQ9NP87 494 aaPredicted RBP3.28□□□□□ -1.88
RNU6-1258P-201ENST00000516911 ADAMTS2O95450 1211 aa3.27□□□□□ -1.89
RNU6-1258P-201ENST00000516911 ITGA6P23229 1130 aa3.27□□□□□ -1.89
RNU6-1258P-201ENST00000516911 GJA5P36382 358 aa3.27□□□□□ -1.89
RNU6-1258P-201ENST00000516911 HAP1P54257 671 aaPredicted RBP3.27□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 61.9 ms