RNA–Protein interactions for RNA: ENST00000515442.1

RUFY3-214, Transcript of RUN and FYVE domain containing 3, humanhuman

TSL 3

Gene RUFY3, Length 456 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RUFY3-214ENST00000515442 NR1H3Q13133 447 aa8.31□□□□□ -1.08
RUFY3-214ENST00000515442 NUDT12Q9BQG2 462 aa8.31□□□□□ -1.08
RUFY3-214ENST00000515442 EVA1BQ9NVM1 165 aa8.31□□□□□ -1.08
RUFY3-214ENST00000515442 ACIN1Q9UKV3 1341 aaKnown RBP8.3□□□□□ -1.08
RUFY3-214ENST00000515442 ZBBXA8MT70 800 aa8.3□□□□□ -1.08
RUFY3-214ENST00000515442 MMP16P51512 607 aa8.3□□□□□ -1.08
RUFY3-214ENST00000515442 CDAN1Q8IWY9 1227 aa8.3□□□□□ -1.08
RUFY3-214ENST00000515442 MTRQ99707 1265 aa8.3□□□□□ -1.08
RUFY3-214ENST00000515442 KCNH2Q12809 1159 aa8.29□□□□□ -1.08
RUFY3-214ENST00000515442 IL21Q9HBE4 155 aa8.29□□□□□ -1.08
RUFY3-214ENST00000515442 PRDM9Q9NQV7 894 aa8.29□□□□□ -1.08
RUFY3-214ENST00000515442 TLL1O43897 1013 aa8.28□□□□□ -1.08
RUFY3-214ENST00000515442 PPP1R12CQ9BZL4 782 aa8.28□□□□□ -1.08
RUFY3-214ENST00000515442 POTEMA6NI47 508 aa8.27□□□□□ -1.09
RUFY3-214ENST00000515442 FBXO45P0C2W1 286 aa8.27□□□□□ -1.09
RUFY3-214ENST00000515442 PTK2Q05397 1052 aa8.27□□□□□ -1.09
RUFY3-214ENST00000515442 NBPF14Q5TI25 921 aa8.27□□□□□ -1.09
RUFY3-214ENST00000515442 POTEGQ6S5H5 508 aa8.27□□□□□ -1.09
RUFY3-214ENST00000515442 GPKOWQ92917 476 aaPredicted RBP eCLIP8.27□□□□□ -1.09
RUFY3-214ENST00000515442 RFX1P22670 979 aa8.26□□□□□ -1.09
RUFY3-214ENST00000515442 TJAP1Q5JTD0 557 aa8.26□□□□□ -1.09
RUFY3-214ENST00000515442 CCDC24Q8N4L8 307 aa8.26□□□□□ -1.09
RUFY3-214ENST00000515442 ZNF592Q92610 1267 aa8.26□□□□□ -1.09
RUFY3-214ENST00000515442 PBXIP1Q96AQ6 731 aa8.26□□□□□ -1.09
RUFY3-214ENST00000515442 SLC6A16Q9GZN6 736 aa8.26□□□□□ -1.09
RUFY3-214ENST00000515442 GPSM3Q9Y4H4 160 aa8.26□□□□□ -1.09
RUFY3-214ENST00000515442 PALM3A6NDB9 673 aaPredicted RBP8.25□□□□□ -1.09
RUFY3-214ENST00000515442 CFAP70Q5T0N1 1121 aa8.25□□□□□ -1.09
RUFY3-214ENST00000515442 PDXDC2PQ6P474 469 aa8.25□□□□□ -1.09
RUFY3-214ENST00000515442 MYT1LQ9UL68 1186 aa8.25□□□□□ -1.09
RUFY3-214ENST00000515442 PDE4CQ08493 712 aa8.24□□□□□ -1.09
RUFY3-214ENST00000515442 ZNF516Q92618 1163 aa8.24□□□□□ -1.09
RUFY3-214ENST00000515442 TFIP11Q9UBB9 837 aaKnown RBP8.24□□□□□ -1.09
RUFY3-214ENST00000515442 LMOD1P29536 600 aaPredicted RBP8.23□□□□□ -1.09
RUFY3-214ENST00000515442 RETREG2Q8NC44 543 aa8.23□□□□□ -1.09
RUFY3-214ENST00000515442 UCN2Q96RP3 112 aa8.23□□□□□ -1.09
RUFY3-214ENST00000515442 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP8.22□□□□□ -1.09
RUFY3-214ENST00000515442 MCCD1P59942 119 aaPredicted RBP8.22□□□□□ -1.09
RUFY3-214ENST00000515442 TRAIPQ9BWF2 469 aa8.22□□□□□ -1.09
RUFY3-214ENST00000515442 UNC93B1Q9H1C4 597 aa8.22□□□□□ -1.09
RUFY3-214ENST00000515442 ATP9BO43861 1147 aa8.21□□□□□ -1.1
RUFY3-214ENST00000515442 ARHGAP9Q9BRR9 750 aa8.21□□□□□ -1.1
RUFY3-214ENST00000515442 ZBTB7CA1YPR0 619 aa8.2□□□□□ -1.1
RUFY3-214ENST00000515442 TRIM26Q12899 539 aaPredicted RBP8.2□□□□□ -1.1
RUFY3-214ENST00000515442 PTCRAQ6ISU1 281 aaPredicted RBP8.2□□□□□ -1.1
RUFY3-214ENST00000515442 TBC1D9Q6ZT07 1266 aa8.2□□□□□ -1.1
RUFY3-214ENST00000515442 ZBTB33Q86T24 672 aa8.2□□□□□ -1.1
RUFY3-214ENST00000515442 PCDHB9Q9Y5E1 797 aa8.2□□□□□ -1.1
RUFY3-214ENST00000515442 MAFBQ9Y5Q3 323 aaPredicted RBP8.2□□□□□ -1.1
RUFY3-214ENST00000515442 S1PR4O95977 384 aa8.19□□□□□ -1.1
RUFY3-214ENST00000515442 CSB-PGBD3P0DP91 1061 aa8.19□□□□□ -1.1
RUFY3-214ENST00000515442 NFATC2IPQ8NCF5 419 aa8.19□□□□□ -1.1
RUFY3-214ENST00000515442 SLFNL1Q499Z3 407 aa8.18□□□□□ -1.1
RUFY3-214ENST00000515442 KCTD17Q8N5Z5 321 aa8.18□□□□□ -1.1
RUFY3-214ENST00000515442 NKX2-3Q8TAU0 364 aa8.18□□□□□ -1.1
RUFY3-214ENST00000515442 ADAM32Q8TC27 787 aa8.18□□□□□ -1.1
RUFY3-214ENST00000515442 SKIP12755 728 aa8.17□□□□□ -1.1
RUFY3-214ENST00000515442 SRPK2P78362 688 aaKnown RBP8.17□□□□□ -1.1
RUFY3-214ENST00000515442 AGERQ15109 404 aa8.17□□□□□ -1.1
RUFY3-214ENST00000515442 NPM2Q86SE8 214 aaKnown RBP8.17□□□□□ -1.1
RUFY3-214ENST00000515442 CEP126Q9P2H0 1117 aa8.17□□□□□ -1.1
RUFY3-214ENST00000515442 HCSTQ9UBK5 93 aa8.17□□□□□ -1.1
RUFY3-214ENST00000515442 FCF1Q9Y324 198 aaKnown RBP8.17□□□□□ -1.1
RUFY3-214ENST00000515442 KCNC4Q03721 635 aa8.16□□□□□ -1.1
RUFY3-214ENST00000515442 SH3BP5LQ7L8J4 393 aa8.16□□□□□ -1.1
RUFY3-214ENST00000515442 BPHLQ86WA6 291 aaPredicted RBP8.16□□□□□ -1.1
RUFY3-214ENST00000515442 DZIP3Q86Y13 1208 aaKnown RBP8.16□□□□□ -1.1
RUFY3-214ENST00000515442 BAP1Q92560 729 aa8.16□□□□□ -1.1
RUFY3-214ENST00000515442 OCSTAMPQ9BR26 566 aa8.16□□□□□ -1.1
RUFY3-214ENST00000515442 VRTNQ9H8Y1 702 aa8.16□□□□□ -1.1
RUFY3-214ENST00000515442 MAGEB6P1A0A0J9YX57 407 aa8.15□□□□□ -1.1
RUFY3-214ENST00000515442 PIK3CDO00329 1044 aa8.15□□□□□ -1.1
RUFY3-214ENST00000515442 CDCA8Q53HL2 280 aa8.15□□□□□ -1.1
RUFY3-214ENST00000515442 CARD14Q9BXL6 1004 aa8.15□□□□□ -1.1
RUFY3-214ENST00000515442 USTQ9Y2C2 406 aa8.15□□□□□ -1.1
RUFY3-214ENST00000515442 USP17L5A8MUK1 530 aa8.14□□□□□ -1.11
RUFY3-214ENST00000515442 ZBTB24O43167 697 aaPredicted RBP8.14□□□□□ -1.11
RUFY3-214ENST00000515442 GGCXP38435 758 aa8.14□□□□□ -1.11
RUFY3-214ENST00000515442 LINC01559Q495D7 138 aa8.14□□□□□ -1.11
RUFY3-214ENST00000515442 RNF135Q8IUD6 432 aa8.14□□□□□ -1.11
RUFY3-214ENST00000515442 ZNF511Q8NB15 262 aa8.14□□□□□ -1.11
RUFY3-214ENST00000515442 USP17L3A6NCW0 530 aa8.13□□□□□ -1.11
RUFY3-214ENST00000515442 USP17L4A6NCW7 530 aa8.13□□□□□ -1.11
RUFY3-214ENST00000515442 ATG7O95352 703 aa8.13□□□□□ -1.11
RUFY3-214ENST00000515442 USP17L2Q6R6M4 530 aa8.13□□□□□ -1.11
RUFY3-214ENST00000515442 USP17L1Q7RTZ2 530 aa8.13□□□□□ -1.11
RUFY3-214ENST00000515442 AEBP1Q8IUX7 1158 aa8.13□□□□□ -1.11
RUFY3-214ENST00000515442 PLEKHM2Q8IWE5 1019 aa8.13□□□□□ -1.11
RUFY3-214ENST00000515442 RNF166Q96A37 237 aaPredicted RBP8.13□□□□□ -1.11
RUFY3-214ENST00000515442 SH3RF1Q7Z6J0 888 aa8.12□□□□□ -1.11
RUFY3-214ENST00000515442 FAM174AQ8TBP5 190 aa8.12□□□□□ -1.11
RUFY3-214ENST00000515442 LZTS3O60299 673 aaPredicted RBP8.11□□□□□ -1.11
RUFY3-214ENST00000515442 ITGBL1O95965 494 aaPredicted RBP8.11□□□□□ -1.11
RUFY3-214ENST00000515442 MAP7D1Q3KQU3 841 aa8.11□□□□□ -1.11
RUFY3-214ENST00000515442 KANK4Q5T7N3 995 aaPredicted RBP8.11□□□□□ -1.11
RUFY3-214ENST00000515442 FOXJ1Q92949 421 aa8.11□□□□□ -1.11
RUFY3-214ENST00000515442 SLC10A4Q96EP9 437 aa8.11□□□□□ -1.11
RUFY3-214ENST00000515442 PPEF1O14829 653 aaPredicted RBP8.1□□□□□ -1.11
RUFY3-214ENST00000515442 ERFEQ4G0M1 354 aa8.1□□□□□ -1.11
RUFY3-214ENST00000515442 DEPDC4Q8N2C3 294 aa8.1□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms