RNA–Protein interactions for RNA: ENST00000515219.5

DDR1-277, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

TSL 5

Gene DDR1, Length 481 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-277ENST00000515219 CCER1Q8TC90 406 aaPredicted RBP24.63■■□□□ 1.53
DDR1-277ENST00000515219 CABP1Q9NZU7 370 aa24.63■■□□□ 1.53
DDR1-277ENST00000515219 TRPC5Q9UL62 973 aaPredicted RBP24.61■■□□□ 1.53
DDR1-277ENST00000515219 TIMELESSQ9UNS1 1208 aa24.61■■□□□ 1.53
DDR1-277ENST00000515219 SBNO2Q9Y2G9 1366 aa24.61■■□□□ 1.53
DDR1-277ENST00000515219 RBM6P78332 1123 aaKnown RBP24.6■■□□□ 1.53
DDR1-277ENST00000515219 BCL9LQ86UU0 1499 aa24.59■■□□□ 1.53
DDR1-277ENST00000515219 CRYBG1Q9Y4K1 1723 aa24.58■■□□□ 1.53
DDR1-277ENST00000515219 ATAD2Q6PL18 1390 aa24.57■■□□□ 1.52
DDR1-277ENST00000515219 NUTM2GQ5VZR2 741 aa24.57■■□□□ 1.52
DDR1-277ENST00000515219 TNKS1BP1Q9C0C2 1729 aaKnown RBP24.57■■□□□ 1.52
DDR1-277ENST00000515219 PLCH1Q4KWH8 1693 aa24.56■■□□□ 1.52
DDR1-277ENST00000515219 SLIT2O94813 1529 aa24.56■■□□□ 1.52
DDR1-277ENST00000515219 ATRNO75882 1429 aa24.56■■□□□ 1.52
DDR1-277ENST00000515219 ABTB2Q8N961 1025 aa24.56■■□□□ 1.52
DDR1-277ENST00000515219 CDK12Q9NYV4 1490 aaPredicted RBP24.56■■□□□ 1.52
DDR1-277ENST00000515219 UNC5CLQ8IV45 518 aa24.55■■□□□ 1.52
DDR1-277ENST00000515219 ST20-MTHFSA0A0A6YYL1 179 aa24.54■■□□□ 1.52
DDR1-277ENST00000515219 PHRF1Q9P1Y6 1649 aaKnown RBP24.53■■□□□ 1.52
DDR1-277ENST00000515219 USP6P35125 1406 aa24.53■■□□□ 1.52
DDR1-277ENST00000515219 NWD2Q9ULI1 1742 aa24.53■■□□□ 1.52
DDR1-277ENST00000515219 FAM83GA6ND36 823 aa24.53■■□□□ 1.52
DDR1-277ENST00000515219 BRD4O60885 1362 aaPredicted RBP24.53■■□□□ 1.52
DDR1-277ENST00000515219 AKAP12Q02952 1782 aa24.52■■□□□ 1.52
DDR1-277ENST00000515219 RGS12O14924 1447 aa24.52■■□□□ 1.52
DDR1-277ENST00000515219 COL14A1Q05707 1796 aaKnown RBP24.51■■□□□ 1.51
DDR1-277ENST00000515219 NLRP13Q86W25 1043 aa24.49■■□□□ 1.51
DDR1-277ENST00000515219 GJD4Q96KN9 370 aaPredicted RBP24.49■■□□□ 1.51
DDR1-277ENST00000515219 ZNF692Q9BU19 519 aaPredicted RBP24.49■■□□□ 1.51
DDR1-277ENST00000515219 USP47Q96K76 1375 aa24.49■■□□□ 1.51
DDR1-277ENST00000515219 TESK2Q96S53 571 aa24.48■■□□□ 1.51
DDR1-277ENST00000515219 PRDM11Q9NQV5 511 aa24.48■■□□□ 1.51
DDR1-277ENST00000515219 TMC1Q8TDI8 760 aa24.47■■□□□ 1.51
DDR1-277ENST00000515219 BTG4Q9NY30 223 aa24.47■■□□□ 1.51
DDR1-277ENST00000515219 SLC24A1O60721 1099 aa24.46■■□□□ 1.51
DDR1-277ENST00000515219 ZC3H6P61129 1189 aaKnown RBP24.46■■□□□ 1.51
DDR1-277ENST00000515219 CCDC9Q9Y3X0 531 aaKnown RBP24.46■■□□□ 1.51
DDR1-277ENST00000515219 NRAPQ86VF7 1730 aa24.46■■□□□ 1.51
DDR1-277ENST00000515219 CPSF1Q10570 1443 aaKnown RBP24.45■■□□□ 1.51
DDR1-277ENST00000515219 SSH2Q76I76 1423 aa24.45■■□□□ 1.51
DDR1-277ENST00000515219 KIAA0232Q92628 1395 aa24.45■■□□□ 1.5
DDR1-277ENST00000515219 NLRP6P59044 892 aa24.45■■□□□ 1.5
DDR1-277ENST00000515219 NRKQ7Z2Y5 1582 aa24.45■■□□□ 1.5
DDR1-277ENST00000515219 KTN1Q86UP2 1357 aaKnown RBP24.44■■□□□ 1.5
DDR1-277ENST00000515219 USP19O94966 1318 aa24.44■■□□□ 1.5
DDR1-277ENST00000515219 VPS72Q15906 364 aa24.44■■□□□ 1.5
DDR1-277ENST00000515219 GLI3P10071 1580 aa24.44■■□□□ 1.5
DDR1-277ENST00000515219 MON2Q7Z3U7 1717 aa24.44■■□□□ 1.5
DDR1-277ENST00000515219 PIK3C2AO00443 1686 aa24.43■■□□□ 1.5
DDR1-277ENST00000515219 TTC21BQ7Z4L5 1316 aa24.43■■□□□ 1.5
DDR1-277ENST00000515219 CHRNA2Q15822 529 aa24.43■■□□□ 1.5
DDR1-277ENST00000515219 PUS7Q96PZ0 661 aaKnown RBP24.43■■□□□ 1.5
DDR1-277ENST00000515219 SLC12A5Q9H2X9 1139 aa24.42■■□□□ 1.5
DDR1-277ENST00000515219 TTC21AQ8NDW8 1320 aa24.4■■□□□ 1.5
DDR1-277ENST00000515219 GCP02774 474 aa24.4■■□□□ 1.5
DDR1-277ENST00000515219 TMF1P82094 1093 aa24.4■■□□□ 1.5
DDR1-277ENST00000515219 HDGFL2Q7Z4V5 671 aaPredicted RBP24.4■■□□□ 1.5
DDR1-277ENST00000515219 CD163L1Q9NR16 1453 aa24.39■■□□□ 1.5
DDR1-277ENST00000515219 TERF2IPQ9NYB0 399 aa24.38■■□□□ 1.49
DDR1-277ENST00000515219 SLIT3O75094 1523 aa24.37■■□□□ 1.49
DDR1-277ENST00000515219 CPDO75976 1380 aa24.37■■□□□ 1.49
DDR1-277ENST00000515219 SUGP2Q8IX01 1082 aaKnown RBP eCLIP24.36■■□□□ 1.49
DDR1-277ENST00000515219 UPF1Q92900 1129 aaKnown RBP eCLIP24.36■■□□□ 1.49
DDR1-277ENST00000515219 ZBTB7CA1YPR0 619 aa24.35■■□□□ 1.49
DDR1-277ENST00000515219 STRN4Q9NRL3 753 aa24.35■■□□□ 1.49
DDR1-277ENST00000515219 A0A1W2PP64 1363 aa24.34■■□□□ 1.49
DDR1-277ENST00000515219 NINLQ9Y2I6 1382 aa24.34■■□□□ 1.49
DDR1-277ENST00000515219 EVA1CP58658 441 aa24.33■■□□□ 1.49
DDR1-277ENST00000515219 BRWD3Q6RI45 1802 aa24.33■■□□□ 1.48
DDR1-277ENST00000515219 LMO7Q8WWI1 1683 aa24.32■■□□□ 1.48
DDR1-277ENST00000515219 CAMTA1Q9Y6Y1 1673 aa24.31■■□□□ 1.48
DDR1-277ENST00000515219 A0A0G2JS52 829 aa24.31■■□□□ 1.48
DDR1-277ENST00000515219 SOX12O15370 315 aa24.31■■□□□ 1.48
DDR1-277ENST00000515219 MYT1Q01538 1121 aa24.31■■□□□ 1.48
DDR1-277ENST00000515219 CDCA8Q53HL2 280 aa24.31■■□□□ 1.48
DDR1-277ENST00000515219 EDC4Q6P2E9 1401 aaKnown RBP24.31■■□□□ 1.48
DDR1-277ENST00000515219 SEPT12Q8IYM1 358 aa24.31■■□□□ 1.48
DDR1-277ENST00000515219 KCNH5Q8NCM2 988 aa24.31■■□□□ 1.48
DDR1-277ENST00000515219 SPATA31A5Q5VU36 1347 aa24.31■■□□□ 1.48
DDR1-277ENST00000515219 SPATA31A7Q8IWB4 1347 aa24.31■■□□□ 1.48
DDR1-277ENST00000515219 FAM98CQ17RN3 349 aaKnown RBP24.3■■□□□ 1.48
DDR1-277ENST00000515219 NME9Q86XW9 330 aa24.3■■□□□ 1.48
DDR1-277ENST00000515219 ZRANB1Q9UGI0 708 aa24.3■■□□□ 1.48
DDR1-277ENST00000515219 ONECUT3O60422 494 aaPredicted RBP24.29■■□□□ 1.48
DDR1-277ENST00000515219 USP31Q70CQ4 1352 aa24.28■■□□□ 1.48
DDR1-277ENST00000515219 USP54Q70EL1 1684 aa24.27■■□□□ 1.48
DDR1-277ENST00000515219 EIF4G2P78344 907 aaKnown RBP eCLIP24.26■■□□□ 1.478e-8■■■■■ 39.6
DDR1-277ENST00000515219 SPATA31A1Q5TZJ5 1347 aa24.26■■□□□ 1.47
DDR1-277ENST00000515219 AATKQ6ZMQ8 1374 aa24.26■■□□□ 1.47
DDR1-277ENST00000515219 ANKRD36BQ8N2N9 1353 aa24.26■■□□□ 1.47
DDR1-277ENST00000515219 LARP1Q6PKG0 1096 aaKnown RBP24.25■■□□□ 1.47
DDR1-277ENST00000515219 USP35Q9P2H5 1018 aa24.25■■□□□ 1.47
DDR1-277ENST00000515219 COL18A1P39060 1754 aa24.24■■□□□ 1.47
DDR1-277ENST00000515219 ARHGEF25Q86VW2 580 aa24.24■■□□□ 1.47
DDR1-277ENST00000515219 COL5A2P05997 1499 aaPredicted RBP24.24■■□□□ 1.47
DDR1-277ENST00000515219 NFAT5O94916 1531 aa24.24■■□□□ 1.47
DDR1-277ENST00000515219 RGPD5Q99666 1765 aa24.22■■□□□ 1.47
DDR1-277ENST00000515219 HSPA5P11021 654 aaKnown RBP24.22■■□□□ 1.47
DDR1-277ENST00000515219 KRT27Q7Z3Y8 459 aa24.22■■□□□ 1.47
DDR1-277ENST00000515219 POLR3GLQ9BT43 218 aa24.2■■□□□ 1.46
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms