RNA–Protein interactions for RNA: ENST00000515066.6

AP3S1-208, Transcript of adaptor related protein complex 3 subunit sigma 1, humanhuman

TSL 2

Gene AP3S1, Length 1,670 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP3S1-208ENST00000515066 SUGP2Q8IX01 1082 aaKnown RBP eCLIP22.93■■□□□ 1.268e-8■□□□□ 10.9
AP3S1-208ENST00000515066 TTC21BQ7Z4L5 1316 aa22.93■■□□□ 1.26
AP3S1-208ENST00000515066 USP54Q70EL1 1684 aa22.92■■□□□ 1.26
AP3S1-208ENST00000515066 FOXO3O43524 673 aa22.92■■□□□ 1.26
AP3S1-208ENST00000515066 BRINP3Q76B58 766 aa22.92■■□□□ 1.26
AP3S1-208ENST00000515066 NHSL1Q5SYE7 1610 aa22.92■■□□□ 1.26
AP3S1-208ENST00000515066 IQSEC2Q5JU85 1478 aa22.91■■□□□ 1.26
AP3S1-208ENST00000515066 ROBO1Q9Y6N7 1651 aa22.9■■□□□ 1.26
AP3S1-208ENST00000515066 RALBP1Q15311 655 aa22.9■■□□□ 1.26
AP3S1-208ENST00000515066 ALS2Q96Q42 1657 aa22.89■■□□□ 1.26
AP3S1-208ENST00000515066 BRD4O60885 1362 aaPredicted RBP22.89■■□□□ 1.25
AP3S1-208ENST00000515066 NME9Q86XW9 330 aa22.89■■□□□ 1.25
AP3S1-208ENST00000515066 GGNBP2Q9H3C7 697 aa22.89■■□□□ 1.25
AP3S1-208ENST00000515066 PXDNQ92626 1479 aa22.88■■□□□ 1.25
AP3S1-208ENST00000515066 OVOS2A0A0J9YW53 1432 aa22.88■■□□□ 1.25
AP3S1-208ENST00000515066 OVOS2Q6IE36 1432 aa22.88■■□□□ 1.25
AP3S1-208ENST00000515066 TTC21AQ8NDW8 1320 aa22.88■■□□□ 1.25
AP3S1-208ENST00000515066 DDX17Q92841 729 aaKnown RBP22.87■■□□□ 1.25
AP3S1-208ENST00000515066 XPCQ01831 940 aaPredicted RBP22.86■■□□□ 1.25
AP3S1-208ENST00000515066 PSME1Q06323 249 aa22.86■■□□□ 1.25
AP3S1-208ENST00000515066 ZRANB1Q9UGI0 708 aa22.86■■□□□ 1.25
AP3S1-208ENST00000515066 NPHP3Q7Z494 1330 aa22.85■■□□□ 1.25
AP3S1-208ENST00000515066 MAP2P11137 1827 aaKnown RBP22.85■■□□□ 1.25
AP3S1-208ENST00000515066 MYBBP1AQ9BQG0 1328 aaKnown RBP22.85■■□□□ 1.25
AP3S1-208ENST00000515066 KRT28Q7Z3Y7 464 aa22.83■■□□□ 1.24
AP3S1-208ENST00000515066 MORC1Q86VD1 984 aa22.83■■□□□ 1.24
AP3S1-208ENST00000515066 USP31Q70CQ4 1352 aa22.82■■□□□ 1.24
AP3S1-208ENST00000515066 CCER2I3L3R5 266 aa22.81■■□□□ 1.24
AP3S1-208ENST00000515066 CCDC184Q52MB2 194 aa22.81■■□□□ 1.24
AP3S1-208ENST00000515066 CERKQ8TCT0 537 aa22.81■■□□□ 1.24
AP3S1-208ENST00000515066 AHDC1Q5TGY3 1603 aaPredicted RBP22.81■■□□□ 1.24
AP3S1-208ENST00000515066 PAK3O75914 559 aaPredicted RBP22.8■■□□□ 1.24
AP3S1-208ENST00000515066 PPP2R1AP30153 589 aa22.8■■□□□ 1.24
AP3S1-208ENST00000515066 SBNO1A3KN83 1393 aa22.79■■□□□ 1.24
AP3S1-208ENST00000515066 SOS2Q07890 1332 aaPredicted RBP22.79■■□□□ 1.24
AP3S1-208ENST00000515066 COG3Q96JB2 828 aa22.78■■□□□ 1.24
AP3S1-208ENST00000515066 CRYBG1Q9Y4K1 1723 aa22.78■■□□□ 1.24
AP3S1-208ENST00000515066 TNNT2P45379 298 aaPredicted RBP22.77■■□□□ 1.24
AP3S1-208ENST00000515066 NLRP13Q86W25 1043 aa22.77■■□□□ 1.24
AP3S1-208ENST00000515066 ABTB2Q8N961 1025 aa22.77■■□□□ 1.24
AP3S1-208ENST00000515066 SCAF1Q9H7N4 1312 aaKnown RBP22.77■■□□□ 1.24
AP3S1-208ENST00000515066 TNS3Q68CZ2 1445 aa22.77■■□□□ 1.24
AP3S1-208ENST00000515066 TOM1O60784 492 aa22.76■■□□□ 1.23
AP3S1-208ENST00000515066 NLRP6P59044 892 aa22.74■■□□□ 1.23
AP3S1-208ENST00000515066 NUTM2GQ5VZR2 741 aa22.74■■□□□ 1.23
AP3S1-208ENST00000515066 FBLN1P23142 703 aa22.74■■□□□ 1.23
AP3S1-208ENST00000515066 SPATA31A3Q5VYP0 1347 aa22.74■■□□□ 1.23
AP3S1-208ENST00000515066 AATKQ6ZMQ8 1374 aa22.73■■□□□ 1.23
AP3S1-208ENST00000515066 SLIT3O75094 1523 aa22.73■■□□□ 1.23
AP3S1-208ENST00000515066 MED1Q15648 1581 aaPredicted RBP22.73■■□□□ 1.23
AP3S1-208ENST00000515066 PHRF1Q9P1Y6 1649 aaKnown RBP22.73■■□□□ 1.23
AP3S1-208ENST00000515066 PHLPP1O60346 1717 aa22.73■■□□□ 1.23
AP3S1-208ENST00000515066 UBAP1LF5GYI3 381 aa22.73■■□□□ 1.23
AP3S1-208ENST00000515066 COL16A1Q07092 1604 aaPredicted RBP22.73■■□□□ 1.23
AP3S1-208ENST00000515066 LTN1O94822 1766 aa22.72■■□□□ 1.23
AP3S1-208ENST00000515066 NFAT5O94916 1531 aa22.72■■□□□ 1.23
AP3S1-208ENST00000515066 SMG6Q86US8 1419 aaKnown RBP22.71■■□□□ 1.23
AP3S1-208ENST00000515066 ABCA3Q99758 1704 aa22.71■■□□□ 1.23
AP3S1-208ENST00000515066 PEAK1Q9H792 1746 aa22.71■■□□□ 1.23
AP3S1-208ENST00000515066 USP19O94966 1318 aa22.71■■□□□ 1.23
AP3S1-208ENST00000515066 MRS2Q9HD23 443 aa22.71■■□□□ 1.23
AP3S1-208ENST00000515066 SHPRHQ149N8 1683 aa22.69■■□□□ 1.22
AP3S1-208ENST00000515066 ARHGEF10O15013 1369 aa22.69■■□□□ 1.22
AP3S1-208ENST00000515066 MTHFSP49914 203 aa22.68■■□□□ 1.22
AP3S1-208ENST00000515066 PIP4K2BP78356 416 aa22.68■■□□□ 1.22
AP3S1-208ENST00000515066 POLKQ9UBT6 870 aa22.68■■□□□ 1.22
AP3S1-208ENST00000515066 LMOD2Q6P5Q4 547 aa22.68■■□□□ 1.22
AP3S1-208ENST00000515066 COL3A1P02461 1466 aaPredicted RBP22.67■■□□□ 1.22
AP3S1-208ENST00000515066 RRS1Q15050 365 aaKnown RBP22.66■■□□□ 1.22
AP3S1-208ENST00000515066 CDK12Q9NYV4 1490 aaPredicted RBP22.65■■□□□ 1.22
AP3S1-208ENST00000515066 EMILIN1Q9Y6C2 1016 aa22.65■■□□□ 1.22
AP3S1-208ENST00000515066 SOX12O15370 315 aa22.65■■□□□ 1.22
AP3S1-208ENST00000515066 PNPLA6Q8IY17 1366 aa22.64■■□□□ 1.22
AP3S1-208ENST00000515066 COL22A1Q8NFW1 1626 aaPredicted RBP22.64■■□□□ 1.22
AP3S1-208ENST00000515066 PNISRQ8TF01 805 aaKnown RBP22.62■■□□□ 1.21
AP3S1-208ENST00000515066 INSRP06213 1382 aa22.62■■□□□ 1.21
AP3S1-208ENST00000515066 MAP3K19Q56UN5 1328 aa22.62■■□□□ 1.21
AP3S1-208ENST00000515066 GCP02774 474 aa22.62■■□□□ 1.21
AP3S1-208ENST00000515066 KCNH5Q8NCM2 988 aa22.6■■□□□ 1.21
AP3S1-208ENST00000515066 CABLES1Q8TDN4 633 aa22.59■■□□□ 1.21
AP3S1-208ENST00000515066 LRRC59Q96AG4 307 aaKnown RBP22.59■■□□□ 1.21
AP3S1-208ENST00000515066 RGPD5Q99666 1765 aa22.58■■□□□ 1.21
AP3S1-208ENST00000515066 PPM1GO15355 546 aaPredicted RBP22.58■■□□□ 1.2
AP3S1-208ENST00000515066 PLEKHG5O94827 1062 aa22.58■■□□□ 1.2
AP3S1-208ENST00000515066 COL18A1P39060 1754 aa22.58■■□□□ 1.2
AP3S1-208ENST00000515066 FLT4P35916 1363 aa22.57■■□□□ 1.2
AP3S1-208ENST00000515066 KIF24Q5T7B8 1368 aa22.57■■□□□ 1.2
AP3S1-208ENST00000515066 CFAP53Q96M91 514 aa22.55■■□□□ 1.2
AP3S1-208ENST00000515066 ARHGEF25Q86VW2 580 aa22.55■■□□□ 1.2
AP3S1-208ENST00000515066 FAM9BQ8IZU0 186 aa22.55■■□□□ 1.2
AP3S1-208ENST00000515066 RTL1A6NKG5 1358 aa22.54■■□□□ 1.2
AP3S1-208ENST00000515066 RGPD1P0DJD0 1748 aa22.54■■□□□ 1.2
AP3S1-208ENST00000515066 HSP90AB2PQ58FF8 381 aa22.52■■□□□ 1.2
AP3S1-208ENST00000515066 CPDO75976 1380 aa22.52■■□□□ 1.2
AP3S1-208ENST00000515066 ABCC6O95255 1503 aa22.52■■□□□ 1.2
AP3S1-208ENST00000515066 HOXC9P31274 260 aa22.52■■□□□ 1.2
AP3S1-208ENST00000515066 ZC3H6P61129 1189 aaKnown RBP22.51■■□□□ 1.19
AP3S1-208ENST00000515066 AMPHP49418 695 aa22.5■■□□□ 1.19
AP3S1-208ENST00000515066 RGPD2P0DJD1 1756 aa22.5■■□□□ 1.19
AP3S1-208ENST00000515066 LMO7Q8WWI1 1683 aa22.5■■□□□ 1.19
Retrieved 100 of 20,778 RNA–protein pairs in 7.6 ms