RNA–Protein interactions for RNA: ENST00000514999.5

CPNE4-212, Transcript of copine 4, humanhuman

TSL 4

Gene CPNE4, Length 550 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE4-212ENST00000514999 ZFRQ96KR1 1074 aaKnown RBP8.92□□□□□ -0.98
CPNE4-212ENST00000514999 BACH2Q9BYV9 841 aa8.92□□□□□ -0.98
CPNE4-212ENST00000514999 SIGLEC1Q9BZZ2 1709 aa8.91□□□□□ -0.98
CPNE4-212ENST00000514999 C6orf132Q5T0Z8 1188 aa8.91□□□□□ -0.98
CPNE4-212ENST00000514999 ESF1Q9H501 851 aaKnown RBP8.91□□□□□ -0.98
CPNE4-212ENST00000514999 LAS1LQ9Y4W2 734 aaKnown RBP8.91□□□□□ -0.98
CPNE4-212ENST00000514999 POLR1AO95602 1720 aaPredicted RBP8.91□□□□□ -0.98
CPNE4-212ENST00000514999 TTC37Q6PGP7 1564 aa8.9□□□□□ -0.98
CPNE4-212ENST00000514999 MYOM3Q5VTT5 1437 aa8.9□□□□□ -0.98
CPNE4-212ENST00000514999 UHRF1BP1Q6BDS2 1440 aa8.9□□□□□ -0.98
CPNE4-212ENST00000514999 MTUS2Q5JR59 1369 aa8.9□□□□□ -0.98
CPNE4-212ENST00000514999 CAMK2BQ13554 666 aa8.9□□□□□ -0.98
CPNE4-212ENST00000514999 L1TD1Q5T7N2 865 aaKnown RBP8.9□□□□□ -0.98
CPNE4-212ENST00000514999 NPM2Q86SE8 214 aaKnown RBP8.9□□□□□ -0.98
CPNE4-212ENST00000514999 PKNOX2Q96KN3 472 aa8.9□□□□□ -0.98
CPNE4-212ENST00000514999 EPAS1Q99814 870 aa8.9□□□□□ -0.98
CPNE4-212ENST00000514999 WBP1LQ9NX94 342 aa8.9□□□□□ -0.98
CPNE4-212ENST00000514999 ATP1B4Q9UN42 357 aaPredicted RBP8.9□□□□□ -0.98
CPNE4-212ENST00000514999 NUP153P49790 1475 aaKnown RBP8.89□□□□□ -0.99
CPNE4-212ENST00000514999 SCAPERQ9BY12 1400 aa8.89□□□□□ -0.99
CPNE4-212ENST00000514999 STRCQ7RTU9 1775 aa8.89□□□□□ -0.99
CPNE4-212ENST00000514999 GCC2Q8IWJ2 1684 aa8.89□□□□□ -0.99
CPNE4-212ENST00000514999 RRP1P56182 461 aaKnown RBP8.89□□□□□ -0.99
CPNE4-212ENST00000514999 ZMYM4Q5VZL5 1548 aa8.89□□□□□ -0.99
CPNE4-212ENST00000514999 EHBP1L1Q8N3D4 1523 aa8.89□□□□□ -0.99
CPNE4-212ENST00000514999 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP8.89□□□□□ -0.99
CPNE4-212ENST00000514999 MAGI2Q86UL8 1455 aa8.89□□□□□ -0.99
CPNE4-212ENST00000514999 INSRP06213 1382 aa8.88□□□□□ -0.99
CPNE4-212ENST00000514999 SAMD9Q5K651 1589 aa8.88□□□□□ -0.99
CPNE4-212ENST00000514999 SEPT9Q9UHD8 586 aaPredicted RBP8.88□□□□□ -0.99
CPNE4-212ENST00000514999 ATP10AO60312 1499 aa8.88□□□□□ -0.99
CPNE4-212ENST00000514999 TRIM6-TRIM34B2RNG4 842 aa8.87□□□□□ -0.99
CPNE4-212ENST00000514999 TCOF1Q13428 1488 aaKnown RBP8.87□□□□□ -0.99
CPNE4-212ENST00000514999 C9orf84Q5VXU9 1444 aa8.87□□□□□ -0.99
CPNE4-212ENST00000514999 BRD4O60885 1362 aaPredicted RBP8.86□□□□□ -0.99
CPNE4-212ENST00000514999 SUPT6HQ7KZ85 1726 aaKnown RBP8.86□□□□□ -0.99
CPNE4-212ENST00000514999 KCNC4Q03721 635 aa8.86□□□□□ -0.99
CPNE4-212ENST00000514999 NFKBIBQ15653 356 aa8.86□□□□□ -0.99
CPNE4-212ENST00000514999 BRPF3Q9ULD4 1205 aa8.86□□□□□ -0.99
CPNE4-212ENST00000514999 ARHGEF12Q9NZN5 1544 aa8.85□□□□□ -0.99
CPNE4-212ENST00000514999 KIF7Q2M1P5 1343 aa8.85□□□□□ -0.99
CPNE4-212ENST00000514999 UBAP1LF5GYI3 381 aa8.85□□□□□ -0.99
CPNE4-212ENST00000514999 DPYSL4O14531 572 aa8.85□□□□□ -0.99
CPNE4-212ENST00000514999 FAM98CQ17RN3 349 aaKnown RBP8.85□□□□□ -0.99
CPNE4-212ENST00000514999 CCDC184Q52MB2 194 aa8.85□□□□□ -0.99
CPNE4-212ENST00000514999 EFCAB2Q5VUJ9 269 aa8.85□□□□□ -0.99
CPNE4-212ENST00000514999 KIF15Q9NS87 1388 aa8.85□□□□□ -0.99
CPNE4-212ENST00000514999 SETD1BQ9UPS6 1966 aaKnown RBP8.84□□□□□ -0.99
CPNE4-212ENST00000514999 RPRD2Q5VT52 1461 aaKnown RBP8.84□□□□□ -0.99
CPNE4-212ENST00000514999 PLEKHH2Q8IVE3 1493 aa8.84□□□□□ -0.99
CPNE4-212ENST00000514999 PTPRTO14522 1441 aa8.84□□□□□ -0.99
CPNE4-212ENST00000514999 RALBP1Q15311 655 aa8.84□□□□□ -0.99
CPNE4-212ENST00000514999 SPATA31E1Q6ZUB1 1445 aa8.84□□□□□ -0.99
CPNE4-212ENST00000514999 TMC1Q8TDI8 760 aa8.84□□□□□ -0.99
CPNE4-212ENST00000514999 FRAT1Q92837 279 aaPredicted RBP8.84□□□□□ -0.99
CPNE4-212ENST00000514999 RCAN3Q9UKA8 241 aa8.84□□□□□ -0.99
CPNE4-212ENST00000514999 PLCH2O75038 1416 aa8.83□□□□□ -1
CPNE4-212ENST00000514999 TSR3Q9UJK0 312 aaKnown RBP8.83□□□□□ -1
CPNE4-212ENST00000514999 LRPPRCP42704 1394 aaKnown RBP8.83□□□□□ -1
CPNE4-212ENST00000514999 RRP9O43818 475 aaKnown RBP8.82□□□□□ -1
CPNE4-212ENST00000514999 AFAP1Q8N556 730 aa8.82□□□□□ -1
CPNE4-212ENST00000514999 RBM33Q96EV2 1170 aaKnown RBP8.82□□□□□ -1
CPNE4-212ENST00000514999 CDKN2AIPQ9NXV6 580 aaPredicted RBP8.82□□□□□ -1
CPNE4-212ENST00000514999 DHX29Q7Z478 1369 aaKnown RBP8.82□□□□□ -1
CPNE4-212ENST00000514999 C3P01024 1663 aa8.81□□□□□ -1
CPNE4-212ENST00000514999 PTPRKQ15262 1439 aa8.81□□□□□ -1
CPNE4-212ENST00000514999 CDK13Q14004 1512 aaKnown RBP8.81□□□□□ -1
CPNE4-212ENST00000514999 LTBP4Q8N2S1 1624 aa8.81□□□□□ -1
CPNE4-212ENST00000514999 MYO5CQ9NQX4 1742 aa8.81□□□□□ -1
CPNE4-212ENST00000514999 Q6ZNB5 142 aa8.81□□□□□ -1
CPNE4-212ENST00000514999 PNISRQ8TF01 805 aaKnown RBP8.81□□□□□ -1
CPNE4-212ENST00000514999 DDX12PQ92771 950 aa8.81□□□□□ -1
CPNE4-212ENST00000514999 L3MBTL2Q969R5 705 aa8.81□□□□□ -1
CPNE4-212ENST00000514999 LRCH3Q96II8 777 aa8.81□□□□□ -1
CPNE4-212ENST00000514999 HPS5Q9UPZ3 1129 aa8.81□□□□□ -1
CPNE4-212ENST00000514999 ROCK1Q13464 1354 aa8.81□□□□□ -1
CPNE4-212ENST00000514999 MYBBP1AQ9BQG0 1328 aaKnown RBP8.8□□□□□ -1
CPNE4-212ENST00000514999 BECN1Q14457 450 aa8.8□□□□□ -1
CPNE4-212ENST00000514999 FAM161AQ3B820 660 aa8.8□□□□□ -1
CPNE4-212ENST00000514999 CENPQQ7L2Z9 268 aaPredicted RBP8.8□□□□□ -1
CPNE4-212ENST00000514999 MPHOSPH9Q99550 1183 aa8.8□□□□□ -1
CPNE4-212ENST00000514999 ARHGAP5Q13017 1502 aa8.8□□□□□ -1
CPNE4-212ENST00000514999 IQSEC2Q5JU85 1478 aa8.79□□□□□ -1
CPNE4-212ENST00000514999 EXOC6Q8TAG9 804 aa8.79□□□□□ -1
CPNE4-212ENST00000514999 TSKSQ9UJT2 592 aa8.79□□□□□ -1
CPNE4-212ENST00000514999 TRAPPC8Q9Y2L5 1435 aa8.79□□□□□ -1
CPNE4-212ENST00000514999 ZNF335Q9H4Z2 1342 aaPredicted RBP8.79□□□□□ -1
CPNE4-212ENST00000514999 ZNF518AQ6AHZ1 1483 aa8.78□□□□□ -1
CPNE4-212ENST00000514999 ANKRD30BQ9BXX2 1392 aa8.78□□□□□ -1
CPNE4-212ENST00000514999 HSP90AA1P07900 732 aaKnown RBP8.78□□□□□ -1
CPNE4-212ENST00000514999 PIP4K2BP78356 416 aa8.78□□□□□ -1
CPNE4-212ENST00000514999 EN1Q05925 392 aaPredicted RBP8.78□□□□□ -1
CPNE4-212ENST00000514999 GOLGA6L2Q8N9W4 650 aaPredicted RBP8.78□□□□□ -1
CPNE4-212ENST00000514999 CAMSAP1Q5T5Y3 1602 aa8.77□□□□□ -1.01
CPNE4-212ENST00000514999 PNNQ9H307 717 aaKnown RBP8.77□□□□□ -1.01
CPNE4-212ENST00000514999 KIF14Q15058 1648 aa8.76□□□□□ -1.01
CPNE4-212ENST00000514999 EIF3AQ14152 1382 aaKnown RBP8.76□□□□□ -1.01
CPNE4-212ENST00000514999 USP47Q96K76 1375 aa8.76□□□□□ -1.01
CPNE4-212ENST00000514999 HSP90AA2PQ14568 343 aaPredicted RBP8.76□□□□□ -1.01
CPNE4-212ENST00000514999 TSR1Q2NL82 804 aaKnown RBP8.76□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms