RNA–Protein interactions for RNA: ENST00000514929.1

SNF8-213, Transcript of SNF8, ESCRT-II complex subunit, humanhuman

TSL 5

Gene SNF8, Length 775 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNF8-213ENST00000514929 SLIT2O94813 1529 aa34.95■■■■□ 3.19
SNF8-213ENST00000514929 UNC5CLQ8IV45 518 aa34.93■■■■□ 3.18
SNF8-213ENST00000514929 TNKS1BP1Q9C0C2 1729 aaKnown RBP34.92■■■■□ 3.18
SNF8-213ENST00000514929 PPIP5K1Q6PFW1 1433 aa34.91■■■■□ 3.18
SNF8-213ENST00000514929 EVC2Q86UK5 1308 aa34.9■■■■□ 3.18
SNF8-213ENST00000514929 CARD11Q9BXL7 1154 aa34.89■■■■□ 3.18
SNF8-213ENST00000514929 GJD4Q96KN9 370 aaPredicted RBP34.87■■■■□ 3.17
SNF8-213ENST00000514929 PLCH1Q4KWH8 1693 aa34.86■■■■□ 3.17
SNF8-213ENST00000514929 RALGAPBQ86X10 1494 aa34.86■■■■□ 3.17
SNF8-213ENST00000514929 FAM83GA6ND36 823 aa34.84■■■■□ 3.17
SNF8-213ENST00000514929 UPF1Q92900 1129 aaKnown RBP eCLIP34.84■■■■□ 3.17
SNF8-213ENST00000514929 NWD2Q9ULI1 1742 aa34.84■■■■□ 3.17
SNF8-213ENST00000514929 CRYBG1Q9Y4K1 1723 aa34.83■■■■□ 3.17
SNF8-213ENST00000514929 CABP1Q9NZU7 370 aa34.82■■■■□ 3.16
SNF8-213ENST00000514929 NUTM2GQ5VZR2 741 aa34.81■■■■□ 3.16
SNF8-213ENST00000514929 ABTB2Q8N961 1025 aa34.78■■■■□ 3.16
SNF8-213ENST00000514929 COL14A1Q05707 1796 aaKnown RBP34.77■■■■□ 3.16
SNF8-213ENST00000514929 VPS72Q15906 364 aa34.77■■■■□ 3.16
SNF8-213ENST00000514929 CCDC9Q9Y3X0 531 aaKnown RBP34.77■■■■□ 3.16
SNF8-213ENST00000514929 GLI3P10071 1580 aa34.76■■■■□ 3.16
SNF8-213ENST00000514929 BTG4Q9NY30 223 aa34.76■■■■□ 3.16
SNF8-213ENST00000514929 PHRF1Q9P1Y6 1649 aaKnown RBP34.75■■■■□ 3.15
SNF8-213ENST00000514929 PRDM11Q9NQV5 511 aa34.75■■■■□ 3.15
SNF8-213ENST00000514929 BRD4O60885 1362 aaPredicted RBP34.74■■■■□ 3.15
SNF8-213ENST00000514929 SBNO2Q9Y2G9 1366 aa34.74■■■■□ 3.15
SNF8-213ENST00000514929 PCGF6Q9BYE7 350 aa34.73■■■■□ 3.15
SNF8-213ENST00000514929 ATAD2Q6PL18 1390 aa34.73■■■■□ 3.15
SNF8-213ENST00000514929 USP6P35125 1406 aa34.72■■■■□ 3.15
SNF8-213ENST00000514929 NRAPQ86VF7 1730 aa34.7■■■■□ 3.15
SNF8-213ENST00000514929 KIAA0232Q92628 1395 aa34.7■■■■□ 3.15
SNF8-213ENST00000514929 ZC3H6P61129 1189 aaKnown RBP34.69■■■■□ 3.14
SNF8-213ENST00000514929 NLRP13Q86W25 1043 aa34.69■■■■□ 3.14
SNF8-213ENST00000514929 USP19O94966 1318 aa34.65■■■■□ 3.14
SNF8-213ENST00000514929 CHRNA2Q15822 529 aa34.65■■■■□ 3.14
SNF8-213ENST00000514929 ZNF692Q9BU19 519 aaPredicted RBP34.64■■■■□ 3.14
SNF8-213ENST00000514929 NRKQ7Z2Y5 1582 aa34.64■■■■□ 3.14
SNF8-213ENST00000514929 NLRP6P59044 892 aa34.61■■■■□ 3.13
SNF8-213ENST00000514929 SEPT12Q8IYM1 358 aa34.61■■■■□ 3.13
SNF8-213ENST00000514929 SSH2Q76I76 1423 aa34.61■■■■□ 3.13
SNF8-213ENST00000514929 CLSPNQ9HAW4 1339 aa34.6■■■■□ 3.13
SNF8-213ENST00000514929 AKAP12Q02952 1782 aa34.6■■■■□ 3.13
SNF8-213ENST00000514929 GCP02774 474 aa34.59■■■■□ 3.13
SNF8-213ENST00000514929 A0A0G2JS52 829 aa34.58■■■■□ 3.13
SNF8-213ENST00000514929 ONECUT3O60422 494 aaPredicted RBP34.58■■■■□ 3.13
SNF8-213ENST00000514929 MYT1Q01538 1121 aa34.58■■■■□ 3.13
SNF8-213ENST00000514929 CPDO75976 1380 aa34.57■■■■□ 3.12
SNF8-213ENST00000514929 TTC21BQ7Z4L5 1316 aa34.56■■■■□ 3.12
SNF8-213ENST00000514929 CPSF1Q10570 1443 aaKnown RBP34.56■■■■□ 3.12
SNF8-213ENST00000514929 ST20-MTHFSA0A0A6YYL1 179 aa34.56■■■■□ 3.12
SNF8-213ENST00000514929 STRN4Q9NRL3 753 aa34.56■■■■□ 3.12
SNF8-213ENST00000514929 KTN1Q86UP2 1357 aaKnown RBP34.56■■■■□ 3.12
SNF8-213ENST00000514929 BRWD3Q6RI45 1802 aa34.55■■■■□ 3.12
SNF8-213ENST00000514929 PIK3C2AO00443 1686 aa34.55■■■■□ 3.12
SNF8-213ENST00000514929 FAM98CQ17RN3 349 aaKnown RBP34.55■■■■□ 3.12
SNF8-213ENST00000514929 TMC1Q8TDI8 760 aa34.55■■■■□ 3.12
SNF8-213ENST00000514929 TIMELESSQ9UNS1 1208 aa34.55■■■■□ 3.12
SNF8-213ENST00000514929 SPATA31A5Q5VU36 1347 aa34.55■■■■□ 3.12
SNF8-213ENST00000514929 SPATA31A7Q8IWB4 1347 aa34.55■■■■□ 3.12
SNF8-213ENST00000514929 EVA1CP58658 441 aa34.52■■■■□ 3.12
SNF8-213ENST00000514929 TTC21AQ8NDW8 1320 aa34.52■■■■□ 3.12
SNF8-213ENST00000514929 SLIT3O75094 1523 aa34.51■■■■□ 3.12
SNF8-213ENST00000514929 TESK2Q96S53 571 aa34.51■■■■□ 3.12
SNF8-213ENST00000514929 SLC24A1O60721 1099 aa34.5■■■■□ 3.11
SNF8-213ENST00000514929 ZBTB7CA1YPR0 619 aa34.49■■■■□ 3.11
SNF8-213ENST00000514929 PUS7Q96PZ0 661 aaKnown RBP34.49■■■■□ 3.11
SNF8-213ENST00000514929 MON2Q7Z3U7 1717 aa34.49■■■■□ 3.11
SNF8-213ENST00000514929 EP400Q96L91 3159 aa34.49■■■■□ 3.11
SNF8-213ENST00000514929 CAMTA1Q9Y6Y1 1673 aa34.48■■■■□ 3.11
SNF8-213ENST00000514929 KRT27Q7Z3Y8 459 aa34.48■■■■□ 3.11
SNF8-213ENST00000514929 LMO7Q8WWI1 1683 aa34.47■■■■□ 3.11
SNF8-213ENST00000514929 HDGFL2Q7Z4V5 671 aaPredicted RBP34.47■■■■□ 3.11
SNF8-213ENST00000514929 SLC12A5Q9H2X9 1139 aa34.47■■■■□ 3.11
SNF8-213ENST00000514929 SPATA31A1Q5TZJ5 1347 aa34.47■■■■□ 3.11
SNF8-213ENST00000514929 USP47Q96K76 1375 aa34.47■■■■□ 3.11
SNF8-213ENST00000514929 CCDC125Q86Z20 511 aa34.46■■■■□ 3.11
SNF8-213ENST00000514929 CCER1Q8TC90 406 aaPredicted RBP34.45■■■■□ 3.11
SNF8-213ENST00000514929 CD163L1Q9NR16 1453 aa34.45■■■■□ 3.1
SNF8-213ENST00000514929 SUGP2Q8IX01 1082 aaKnown RBP eCLIP34.43■■■■□ 3.1
SNF8-213ENST00000514929 TERF2IPQ9NYB0 399 aa34.43■■■■□ 3.1
SNF8-213ENST00000514929 KCNH5Q8NCM2 988 aa34.42■■■■□ 3.1
SNF8-213ENST00000514929 USP35Q9P2H5 1018 aa34.42■■■■□ 3.1
SNF8-213ENST00000514929 LARP1Q6PKG0 1096 aaKnown RBP34.41■■■■□ 3.1
SNF8-213ENST00000514929 SOX12O15370 315 aa34.4■■■■□ 3.1
SNF8-213ENST00000514929 AATKQ6ZMQ8 1374 aa34.39■■■■□ 3.1
SNF8-213ENST00000514929 THSD7AQ9UPZ6 1657 aa34.39■■■■□ 3.1
SNF8-213ENST00000514929 COL5A2P05997 1499 aaPredicted RBP34.39■■■■□ 3.1
SNF8-213ENST00000514929 BLMP54132 1417 aaPredicted RBP34.38■■■■□ 3.09
SNF8-213ENST00000514929 A0A1W2PP64 1363 aa34.37■■■■□ 3.09
SNF8-213ENST00000514929 TMF1P82094 1093 aa34.37■■■■□ 3.09
SNF8-213ENST00000514929 EDC4Q6P2E9 1401 aaKnown RBP34.37■■■■□ 3.09
SNF8-213ENST00000514929 NINLQ9Y2I6 1382 aa34.36■■■■□ 3.09
SNF8-213ENST00000514929 NME9Q86XW9 330 aa34.35■■■■□ 3.09
SNF8-213ENST00000514929 ZRANB1Q9UGI0 708 aa34.35■■■■□ 3.09
SNF8-213ENST00000514929 ARHGEF25Q86VW2 580 aa34.34■■■■□ 3.09
SNF8-213ENST00000514929 SF3B2Q13435 895 aaKnown RBP34.33■■■■□ 3.09
SNF8-213ENST00000514929 TCP11L2Q8N4U5 519 aa34.33■■■■□ 3.09
SNF8-213ENST00000514929 USP31Q70CQ4 1352 aa34.33■■■■□ 3.09
SNF8-213ENST00000514929 BARGINQ6ZT62 677 aa34.32■■■■□ 3.08
SNF8-213ENST00000514929 COL18A1P39060 1754 aa34.31■■■■□ 3.08
SNF8-213ENST00000514929 NFAT5O94916 1531 aa34.3■■■■□ 3.08
Retrieved 100 of 20,778 RNA–protein pairs in 120.8 ms