RNA–Protein interactions for RNA: ENST00000514909.1

LDHBP3-201, Transcript of lactate dehydrogenase B pseudogene 3, humanhuman

BASIC

Gene LDHBP3, Length 822 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDHBP3-201ENST00000514909 NBPF3Q9H094 633 aa13□□□□□ -0.33
LDHBP3-201ENST00000514909 ACTN4O43707 911 aaKnown RBP12.99□□□□□ -0.33
LDHBP3-201ENST00000514909 B4GALNT3Q6L9W6 998 aa12.99□□□□□ -0.33
LDHBP3-201ENST00000514909 ZC3H4Q9UPT8 1303 aaKnown RBP12.98□□□□□ -0.33
LDHBP3-201ENST00000514909 IVNS1ABPQ9Y6Y0 642 aa12.98□□□□□ -0.33
LDHBP3-201ENST00000514909 SND1Q7KZF4 910 aaKnown RBP eCLIP12.97□□□□□ -0.33
LDHBP3-201ENST00000514909 PRR14Q9BWN1 585 aa12.97□□□□□ -0.33
LDHBP3-201ENST00000514909 GNEQ9Y223 722 aaKnown RBP12.97□□□□□ -0.33
LDHBP3-201ENST00000514909 ZBBXA8MT70 800 aa12.96□□□□□ -0.33
LDHBP3-201ENST00000514909 PTPN5P54829 565 aa12.96□□□□□ -0.33
LDHBP3-201ENST00000514909 SLC27A5Q9Y2P5 690 aa12.96□□□□□ -0.33
LDHBP3-201ENST00000514909 SALL2Q9Y467 1007 aaPredicted RBP12.96□□□□□ -0.33
LDHBP3-201ENST00000514909 CARNS1A5YM72 827 aa12.95□□□□□ -0.34
LDHBP3-201ENST00000514909 KANK4Q5T7N3 995 aaPredicted RBP12.95□□□□□ -0.34
LDHBP3-201ENST00000514909 FOXD4L5Q5VV16 416 aaPredicted RBP12.95□□□□□ -0.34
LDHBP3-201ENST00000514909 THSD4Q6ZMP0 1018 aa12.95□□□□□ -0.34
LDHBP3-201ENST00000514909 FOXD4L4Q8WXT5 416 aaPredicted RBP12.95□□□□□ -0.34
LDHBP3-201ENST00000514909 AMOTL2Q9Y2J4 779 aa12.94□□□□□ -0.34
LDHBP3-201ENST00000514909 RNF40O75150 1001 aa12.93□□□□□ -0.34
LDHBP3-201ENST00000514909 FBXO45P0C2W1 286 aa12.93□□□□□ -0.34
LDHBP3-201ENST00000514909 CCDC27Q2M243 656 aa12.93□□□□□ -0.34
LDHBP3-201ENST00000514909 PLEKHM2Q8IWE5 1019 aa12.93□□□□□ -0.34
LDHBP3-201ENST00000514909 ZFRQ96KR1 1074 aaKnown RBP12.93□□□□□ -0.34
LDHBP3-201ENST00000514909 FKBPLQ9UIM3 349 aa12.93□□□□□ -0.34
LDHBP3-201ENST00000514909 CDCA8Q53HL2 280 aa12.92□□□□□ -0.34
LDHBP3-201ENST00000514909 F12P00748 615 aaPredicted RBP12.91□□□□□ -0.34
LDHBP3-201ENST00000514909 USB1Q9BQ65 265 aaKnown RBP12.9□□□□□ -0.34
LDHBP3-201ENST00000514909 PUS10Q3MIT2 529 aaKnown RBP12.89□□□□□ -0.35
LDHBP3-201ENST00000514909 MRPL50Q8N5N7 158 aaKnown RBP12.89□□□□□ -0.35
LDHBP3-201ENST00000514909 ZNF592Q92610 1267 aa12.89□□□□□ -0.35
LDHBP3-201ENST00000514909 IFFO2Q5TF58 517 aa12.88□□□□□ -0.35
LDHBP3-201ENST00000514909 BRICD5Q6PL45 260 aa12.88□□□□□ -0.35
LDHBP3-201ENST00000514909 LRCH3Q96II8 777 aa12.88□□□□□ -0.35
LDHBP3-201ENST00000514909 ZMIZ1Q9ULJ6 1067 aa12.88□□□□□ -0.35
LDHBP3-201ENST00000514909 USP17L3A6NCW0 530 aa12.87□□□□□ -0.35
LDHBP3-201ENST00000514909 USP17L4A6NCW7 530 aa12.87□□□□□ -0.35
LDHBP3-201ENST00000514909 RBM25P49756 843 aaKnown RBP12.87□□□□□ -0.35
LDHBP3-201ENST00000514909 PTPRNQ16849 979 aa12.87□□□□□ -0.35
LDHBP3-201ENST00000514909 USP17L2Q6R6M4 530 aa12.87□□□□□ -0.35
LDHBP3-201ENST00000514909 RNF19BQ6ZMZ0 732 aa12.87□□□□□ -0.35
LDHBP3-201ENST00000514909 USP17L1Q7RTZ2 530 aa12.87□□□□□ -0.35
LDHBP3-201ENST00000514909 WNT2BQ93097 391 aa12.87□□□□□ -0.35
LDHBP3-201ENST00000514909 PIK3CDO00329 1044 aa12.86□□□□□ -0.35
LDHBP3-201ENST00000514909 BLOC1S3Q6QNY0 202 aa12.86□□□□□ -0.35
LDHBP3-201ENST00000514909 GPSM3Q9Y4H4 160 aa12.86□□□□□ -0.35
LDHBP3-201ENST00000514909 FAM196BA6NMK8 535 aa12.85□□□□□ -0.35
LDHBP3-201ENST00000514909 USP17L5A8MUK1 530 aa12.85□□□□□ -0.35
LDHBP3-201ENST00000514909 MCCD1P59942 119 aaPredicted RBP12.85□□□□□ -0.35
LDHBP3-201ENST00000514909 TMEM164Q5U3C3 297 aa12.85□□□□□ -0.35
LDHBP3-201ENST00000514909 CDKN2AIPQ9NXV6 580 aaPredicted RBP12.85□□□□□ -0.35
LDHBP3-201ENST00000514909 JUNDP17535 347 aa12.84□□□□□ -0.35
LDHBP3-201ENST00000514909 NOVA2Q9UNW9 492 aaKnown RBP12.84□□□□□ -0.35
LDHBP3-201ENST00000514909 GOLGA8CPA6NN73 597 aa12.83□□□□□ -0.36
LDHBP3-201ENST00000514909 SKIP12755 728 aa12.83□□□□□ -0.36
LDHBP3-201ENST00000514909 GPKOWQ92917 476 aaPredicted RBP eCLIP12.83□□□□□ -0.36
LDHBP3-201ENST00000514909 THAP11Q96EK4 314 aa12.83□□□□□ -0.36
LDHBP3-201ENST00000514909 LZTS3O60299 673 aaPredicted RBP12.82□□□□□ -0.36
LDHBP3-201ENST00000514909 FMNL1O95466 1100 aaPredicted RBP12.82□□□□□ -0.36
LDHBP3-201ENST00000514909 TXNDC2Q86VQ3 553 aa12.82□□□□□ -0.36
LDHBP3-201ENST00000514909 CCER1Q8TC90 406 aaPredicted RBP12.82□□□□□ -0.36
LDHBP3-201ENST00000514909 STK32AQ8WU08 396 aa12.82□□□□□ -0.36
LDHBP3-201ENST00000514909 ZNF428Q96B54 188 aa12.82□□□□□ -0.36
LDHBP3-201ENST00000514909 E9PSI1 815 aa12.81□□□□□ -0.36
LDHBP3-201ENST00000514909 ARMC2Q8NEN0 867 aa12.8□□□□□ -0.36
LDHBP3-201ENST00000514909 FAM174AQ8TBP5 190 aa12.8□□□□□ -0.36
LDHBP3-201ENST00000514909 MAP10Q9P2G4 905 aa12.8□□□□□ -0.36
LDHBP3-201ENST00000514909 USP17L15C9J2P7 530 aa12.79□□□□□ -0.36
LDHBP3-201ENST00000514909 USP17L10C9JJH3 530 aa12.79□□□□□ -0.36
LDHBP3-201ENST00000514909 USP17L13C9JLJ4 530 aa12.79□□□□□ -0.36
LDHBP3-201ENST00000514909 USP17L12C9JPN9 530 aa12.79□□□□□ -0.36
LDHBP3-201ENST00000514909 USP17L11C9JVI0 530 aa12.79□□□□□ -0.36
LDHBP3-201ENST00000514909 USP17L21D6R901 530 aa12.79□□□□□ -0.36
LDHBP3-201ENST00000514909 USP17L18D6R9N7 530 aa12.79□□□□□ -0.36
LDHBP3-201ENST00000514909 USP17L22D6RA61 530 aa12.79□□□□□ -0.36
LDHBP3-201ENST00000514909 USP17L17D6RBQ6 530 aa12.79□□□□□ -0.36
LDHBP3-201ENST00000514909 USP17L19D6RCP7 530 aa12.79□□□□□ -0.36
LDHBP3-201ENST00000514909 USP17L20D6RJB6 530 aa12.79□□□□□ -0.36
LDHBP3-201ENST00000514909 NR1I2O75469 434 aa12.79□□□□□ -0.36
LDHBP3-201ENST00000514909 USP17L24Q0WX57 530 aa12.79□□□□□ -0.36
LDHBP3-201ENST00000514909 PTK2Q05397 1052 aa12.78□□□□□ -0.36
LDHBP3-201ENST00000514909 PDXDC2PQ6P474 469 aa12.78□□□□□ -0.36
LDHBP3-201ENST00000514909 ATP5J2-PTCD1G3V325 749 aa12.77□□□□□ -0.37
LDHBP3-201ENST00000514909 MSS51Q4VC12 460 aa12.77□□□□□ -0.37
LDHBP3-201ENST00000514909 PHLDB3Q6NSJ2 640 aa12.77□□□□□ -0.37
LDHBP3-201ENST00000514909 SCUBE3Q8IX30 993 aa12.77□□□□□ -0.37
LDHBP3-201ENST00000514909 CEP126Q9P2H0 1117 aa12.77□□□□□ -0.37
LDHBP3-201ENST00000514909 A0A0G2JS52 829 aa12.76□□□□□ -0.37
LDHBP3-201ENST00000514909 PHTF2Q8N3S3 785 aa12.76□□□□□ -0.37
LDHBP3-201ENST00000514909 MKRN1Q9UHC7 482 aaKnown RBP12.76□□□□□ -0.37
LDHBP3-201ENST00000514909 CHIC2Q9UKJ5 165 aa12.76□□□□□ -0.37
LDHBP3-201ENST00000514909 RGS20O76081 388 aa12.75□□□□□ -0.37
LDHBP3-201ENST00000514909 CCNYL3P0C7X3 344 aa12.75□□□□□ -0.37
LDHBP3-201ENST00000514909 SSFA2P28290 1259 aa12.75□□□□□ -0.37
LDHBP3-201ENST00000514909 PTK7Q13308 1070 aa12.75□□□□□ -0.37
LDHBP3-201ENST00000514909 SLFNL1Q499Z3 407 aa12.75□□□□□ -0.37
LDHBP3-201ENST00000514909 CRTC2Q53ET0 693 aaPredicted RBP12.75□□□□□ -0.37
LDHBP3-201ENST00000514909 LARP1Q6PKG0 1096 aaKnown RBP12.75□□□□□ -0.37
LDHBP3-201ENST00000514909 ANKK1Q8NFD2 765 aa12.75□□□□□ -0.37
LDHBP3-201ENST00000514909 CLP1Q92989 425 aaKnown RBP12.75□□□□□ -0.37
LDHBP3-201ENST00000514909 ARID4AP29374 1257 aaPredicted RBP12.74□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 76.6 ms