RNA–Protein interactions for RNA: ENST00000514693.5

PROM1-217, Transcript of prominin 1, humanhuman

TSL 4

Gene PROM1, Length 530 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PROM1-217ENST00000514693 MRGPRX2Q96LB1 330 aa8.35□□□□□ -1.07
PROM1-217ENST00000514693 PCDHGC3Q9UN70 934 aa8.35□□□□□ -1.07
PROM1-217ENST00000514693 MOXD2PA6NHM9 499 aa8.34□□□□□ -1.07
PROM1-217ENST00000514693 AVPP01185 164 aa8.34□□□□□ -1.07
PROM1-217ENST00000514693 NDUFV2P19404 249 aa8.34□□□□□ -1.07
PROM1-217ENST00000514693 CTC1Q2NKJ3 1217 aa8.34□□□□□ -1.07
PROM1-217ENST00000514693 CRIPAKQ8N1N5 446 aa8.34□□□□□ -1.07
PROM1-217ENST00000514693 BEGAINQ9BUH8 593 aa8.34□□□□□ -1.07
PROM1-217ENST00000514693 POLR3EQ9NVU0 708 aa8.34□□□□□ -1.07
PROM1-217ENST00000514693 POTECB2RU33 542 aa8.33□□□□□ -1.08
PROM1-217ENST00000514693 WNT7BP56706 349 aa8.33□□□□□ -1.08
PROM1-217ENST00000514693 DIXDC1Q155Q3 683 aa8.33□□□□□ -1.08
PROM1-217ENST00000514693 RC3H1Q5TC82 1133 aaKnown RBP8.33□□□□□ -1.08
PROM1-217ENST00000514693 ZNF775Q96BV0 537 aaPredicted RBP8.33□□□□□ -1.08
PROM1-217ENST00000514693 COG6Q9Y2V7 657 aa8.33□□□□□ -1.08
PROM1-217ENST00000514693 SPDYE5A6NIY4 337 aa8.32□□□□□ -1.08
PROM1-217ENST00000514693 CCNYL3P0C7X3 344 aa8.31□□□□□ -1.08
PROM1-217ENST00000514693 MTMR2Q13614 643 aa8.31□□□□□ -1.08
PROM1-217ENST00000514693 RETREG2Q8NC44 543 aa8.31□□□□□ -1.08
PROM1-217ENST00000514693 TBC1D2Q9BYX2 928 aa8.31□□□□□ -1.08
PROM1-217ENST00000514693 SMPD1P17405 629 aa8.3□□□□□ -1.08
PROM1-217ENST00000514693 SKOR1P84550 965 aa8.3□□□□□ -1.08
PROM1-217ENST00000514693 PRR7Q8TB68 274 aa8.3□□□□□ -1.08
PROM1-217ENST00000514693 GNL3Q9BVP2 549 aaKnown RBP eCLIP8.3□□□□□ -1.08
PROM1-217ENST00000514693 ZNF330Q9Y3S2 320 aaPredicted RBP8.3□□□□□ -1.08
PROM1-217ENST00000514693 J3QL48 77 aa8.29□□□□□ -1.08
PROM1-217ENST00000514693 PTPRNQ16849 979 aa8.29□□□□□ -1.08
PROM1-217ENST00000514693 EHBP1Q8NDI1 1231 aa8.29□□□□□ -1.08
PROM1-217ENST00000514693 SNRKQ9NRH2 765 aa8.29□□□□□ -1.08
PROM1-217ENST00000514693 ALDH1A1P00352 501 aa8.28□□□□□ -1.08
PROM1-217ENST00000514693 SMCPP49901 116 aaPredicted RBP8.28□□□□□ -1.08
PROM1-217ENST00000514693 PTCRAQ6ISU1 281 aaPredicted RBP8.28□□□□□ -1.08
PROM1-217ENST00000514693 C11orf95C9JLR9 678 aaPredicted RBP8.27□□□□□ -1.09
PROM1-217ENST00000514693 GJA5P36382 358 aa8.27□□□□□ -1.09
PROM1-217ENST00000514693 TMCO4Q5TGY1 634 aa8.27□□□□□ -1.09
PROM1-217ENST00000514693 MYSM1Q5VVJ2 828 aa8.27□□□□□ -1.09
PROM1-217ENST00000514693 BANK1Q8NDB2 785 aa8.27□□□□□ -1.09
PROM1-217ENST00000514693 RGS22Q8NE09 1264 aa8.27□□□□□ -1.09
PROM1-217ENST00000514693 DACH1Q9UI36 760 aa8.27□□□□□ -1.09
PROM1-217ENST00000514693 IRF5Q13568 498 aa8.26□□□□□ -1.09
PROM1-217ENST00000514693 DESI1Q6ICB0 168 aa8.26□□□□□ -1.09
PROM1-217ENST00000514693 RSBN1LQ6PCB5 846 aaPredicted RBP8.26□□□□□ -1.09
PROM1-217ENST00000514693 GZF1Q9H116 711 aaPredicted RBP8.26□□□□□ -1.09
PROM1-217ENST00000514693 EVA1BQ9NVM1 165 aa8.26□□□□□ -1.09
PROM1-217ENST00000514693 GMPR2Q9P2T1 348 aaKnown RBP8.26□□□□□ -1.09
PROM1-217ENST00000514693 RFC5P40937 340 aa8.25□□□□□ -1.09
PROM1-217ENST00000514693 CLK2P49760 499 aaKnown RBP8.25□□□□□ -1.09
PROM1-217ENST00000514693 HPS1Q92902 700 aa8.25□□□□□ -1.09
PROM1-217ENST00000514693 UNC93B1Q9H1C4 597 aa8.25□□□□□ -1.09
PROM1-217ENST00000514693 ZBTB3Q9H5J0 574 aa8.25□□□□□ -1.09
PROM1-217ENST00000514693 WASF2Q9Y6W5 498 aa8.25□□□□□ -1.09
PROM1-217ENST00000514693 KCNH2Q12809 1159 aa8.24□□□□□ -1.09
PROM1-217ENST00000514693 MTMR7Q9Y216 660 aa8.24□□□□□ -1.09
PROM1-217ENST00000514693 SPTLC1O15269 473 aa8.23□□□□□ -1.09
PROM1-217ENST00000514693 CTHP32929 405 aa8.23□□□□□ -1.09
PROM1-217ENST00000514693 SH3BP2P78314 561 aa8.23□□□□□ -1.09
PROM1-217ENST00000514693 CSPP1Q1MSJ5 1256 aa8.23□□□□□ -1.09
PROM1-217ENST00000514693 LINC01559Q495D7 138 aa8.23□□□□□ -1.09
PROM1-217ENST00000514693 RIC3Q7Z5B4 369 aa8.23□□□□□ -1.09
PROM1-217ENST00000514693 ATP13A2Q9NQ11 1180 aa8.23□□□□□ -1.09
PROM1-217ENST00000514693 PCDHB15Q9Y5E8 787 aa8.23□□□□□ -1.09
PROM1-217ENST00000514693 PPP1R15AO75807 674 aaPredicted RBP8.22□□□□□ -1.09
PROM1-217ENST00000514693 TMEM259Q4ZIN3 620 aa8.22□□□□□ -1.09
PROM1-217ENST00000514693 FBXO31Q5XUX0 539 aaPredicted RBP8.22□□□□□ -1.09
PROM1-217ENST00000514693 BAP1Q92560 729 aa8.22□□□□□ -1.09
PROM1-217ENST00000514693 SENP2Q9HC62 589 aa8.22□□□□□ -1.09
PROM1-217ENST00000514693 MFAP1P55081 439 aaKnown RBP8.21□□□□□ -1.1
PROM1-217ENST00000514693 PRPF38BQ5VTL8 546 aaKnown RBP8.21□□□□□ -1.1
PROM1-217ENST00000514693 TSC1Q92574 1164 aa8.21□□□□□ -1.1
PROM1-217ENST00000514693 GDPD2Q9HCC8 539 aa8.21□□□□□ -1.1
PROM1-217ENST00000514693 ACIN1Q9UKV3 1341 aaKnown RBP8.21□□□□□ -1.1
PROM1-217ENST00000514693 NUTM2BA6NNL0 878 aaPredicted RBP8.2□□□□□ -1.1
PROM1-217ENST00000514693 NUTM2EB1AL46 878 aaPredicted RBP8.2□□□□□ -1.1
PROM1-217ENST00000514693 CFAP99D6REC4 459 aa8.2□□□□□ -1.1
PROM1-217ENST00000514693 NUTM2DQ5VT03 806 aaPredicted RBP8.2□□□□□ -1.1
PROM1-217ENST00000514693 LYPD8Q6UX82 237 aa8.2□□□□□ -1.1
PROM1-217ENST00000514693 NUTM2AQ8IVF1 878 aaPredicted RBP8.2□□□□□ -1.1
PROM1-217ENST00000514693 ZNF511Q8NB15 262 aa8.2□□□□□ -1.1
PROM1-217ENST00000514693 CALR3Q96L12 384 aaKnown RBP8.2□□□□□ -1.1
PROM1-217ENST00000514693 SIAH2O43255 324 aa8.19□□□□□ -1.1
PROM1-217ENST00000514693 PPP2R2DQ66LE6 453 aa8.19□□□□□ -1.1
PROM1-217ENST00000514693 WWC1Q8IX03 1113 aa8.19□□□□□ -1.1
PROM1-217ENST00000514693 MTMR14Q8NCE2 650 aa8.19□□□□□ -1.1
PROM1-217ENST00000514693 CABLES1Q8TDN4 633 aa8.19□□□□□ -1.1
PROM1-217ENST00000514693 LIMD1Q9UGP4 676 aa8.19□□□□□ -1.1
PROM1-217ENST00000514693 VARSP26640 1264 aaKnown RBP8.18□□□□□ -1.1
PROM1-217ENST00000514693 TREML4Q6UXN2 200 aa8.18□□□□□ -1.1
PROM1-217ENST00000514693 PDE4CQ08493 712 aa8.17□□□□□ -1.1
PROM1-217ENST00000514693 FOXD4L5Q5VV16 416 aaPredicted RBP8.17□□□□□ -1.1
PROM1-217ENST00000514693 FOXD4L4Q8WXT5 416 aaPredicted RBP8.17□□□□□ -1.1
PROM1-217ENST00000514693 KIFC2Q96AC6 838 aa8.17□□□□□ -1.1
PROM1-217ENST00000514693 TRIM47Q96LD4 638 aa8.17□□□□□ -1.1
PROM1-217ENST00000514693 POM121CA8CG34 1229 aa8.16□□□□□ -1.1
PROM1-217ENST00000514693 CAPN5O15484 640 aaPredicted RBP8.16□□□□□ -1.1
PROM1-217ENST00000514693 ABL2P42684 1182 aa8.16□□□□□ -1.1
PROM1-217ENST00000514693 GLMNQ92990 594 aa8.16□□□□□ -1.1
PROM1-217ENST00000514693 MAP10Q9P2G4 905 aa8.16□□□□□ -1.1
PROM1-217ENST00000514693 TLL2Q9Y6L7 1015 aa8.16□□□□□ -1.1
PROM1-217ENST00000514693 SNRPBP14678 240 aaKnown RBP8.15□□□□□ -1.1
PROM1-217ENST00000514693 AGERQ15109 404 aa8.15□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms