RNA–Protein interactions for RNA: ENST00000514344.5

CHD1-211, Transcript of chromodomain helicase DNA binding protein 1, humanhuman

TSL 5

Gene CHD1, Length 2,955 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1-211ENST00000514344 HSPA6P17066 643 aa5.11□□□□□ -1.59
CHD1-211ENST00000514344 PDE3BQ13370 1112 aa5.11□□□□□ -1.59
CHD1-211ENST00000514344 COL13A1Q5TAT6 717 aaPredicted RBP5.11□□□□□ -1.59
CHD1-211ENST00000514344 LHX8Q68G74 356 aa5.11□□□□□ -1.59
CHD1-211ENST00000514344 CCDC144AA2RUR9 1427 aa5.11□□□□□ -1.59
CHD1-211ENST00000514344 ANKRD50Q9ULJ7 1429 aa5.11□□□□□ -1.59
CHD1-211ENST00000514344 ZNF526Q8TF50 670 aaPredicted RBP5.11□□□□□ -1.59
CHD1-211ENST00000514344 BCL11BQ9C0K0 894 aaPredicted RBP5.11□□□□□ -1.59
CHD1-211ENST00000514344 STRN4Q9NRL3 753 aa5.11□□□□□ -1.59
CHD1-211ENST00000514344 TNS3Q68CZ2 1445 aa5.11□□□□□ -1.59
CHD1-211ENST00000514344 NRAPQ86VF7 1730 aa5.11□□□□□ -1.59
CHD1-211ENST00000514344 HAX1O00165 279 aa5.1□□□□□ -1.59
CHD1-211ENST00000514344 WAPLQ7Z5K2 1190 aa5.1□□□□□ -1.59
CHD1-211ENST00000514344 THSD7AQ9UPZ6 1657 aa5.1□□□□□ -1.59
CHD1-211ENST00000514344 IQGAP3Q86VI3 1631 aa5.1□□□□□ -1.59
CHD1-211ENST00000514344 STK26Q9P289 416 aa5.1□□□□□ -1.59
CHD1-211ENST00000514344 ABCA3Q99758 1704 aa5.1□□□□□ -1.59
CHD1-211ENST00000514344 CDC42BPGQ6DT37 1551 aa5.1□□□□□ -1.59
CHD1-211ENST00000514344 HFM1A2PYH4 1435 aa5.1□□□□□ -1.59
CHD1-211ENST00000514344 APLP2Q06481 763 aa5.1□□□□□ -1.59
CHD1-211ENST00000514344 SHANK3Q9BYB0 1731 aa5.09□□□□□ -1.59
CHD1-211ENST00000514344 NAIPQ13075 1403 aa5.09□□□□□ -1.59
CHD1-211ENST00000514344 PSME1Q06323 249 aa5.09□□□□□ -1.59
CHD1-211ENST00000514344 CASZ1Q86V15 1759 aa5.09□□□□□ -1.59
CHD1-211ENST00000514344 DLC1Q96QB1 1528 aa5.09□□□□□ -1.59
CHD1-211ENST00000514344 GPBP1L1Q9HC44 474 aaPredicted RBP5.09□□□□□ -1.6
CHD1-211ENST00000514344 PRDM11Q9NQV5 511 aa5.09□□□□□ -1.6
CHD1-211ENST00000514344 SPATA31A1Q5TZJ5 1347 aa5.08□□□□□ -1.6
CHD1-211ENST00000514344 SLC34A2O95436 690 aa5.08□□□□□ -1.6
CHD1-211ENST00000514344 CHRNA2Q15822 529 aa5.08□□□□□ -1.6
CHD1-211ENST00000514344 TNS4Q8IZW8 715 aa5.08□□□□□ -1.6
CHD1-211ENST00000514344 ARXQ96QS3 562 aa5.08□□□□□ -1.6
CHD1-211ENST00000514344 TECPR2O15040 1411 aa5.08□□□□□ -1.6
CHD1-211ENST00000514344 PTF1AQ7RTS3 328 aa5.08□□□□□ -1.6
CHD1-211ENST00000514344 PMFBP1Q8TBY8 1022 aa5.08□□□□□ -1.6
CHD1-211ENST00000514344 PHF8Q9UPP1 1060 aa5.08□□□□□ -1.6
CHD1-211ENST00000514344 NEXMIFQ5QGS0 1516 aa5.08□□□□□ -1.6
CHD1-211ENST00000514344 RGPD8O14715 1765 aaPredicted RBP5.08□□□□□ -1.6
CHD1-211ENST00000514344 ARHGEF10O15013 1369 aa5.07□□□□□ -1.6
CHD1-211ENST00000514344 FAM50AQ14320 339 aaKnown RBP5.07□□□□□ -1.6
CHD1-211ENST00000514344 MTFR1LQ9H019 292 aa5.07□□□□□ -1.6
CHD1-211ENST00000514344 COL14A1Q05707 1796 aaKnown RBP5.07□□□□□ -1.6
CHD1-211ENST00000514344 NUP155O75694 1391 aa5.07□□□□□ -1.6
CHD1-211ENST00000514344 PLEKHH1Q9ULM0 1364 aa5.07□□□□□ -1.6
CHD1-211ENST00000514344 PRELPP51888 382 aa5.07□□□□□ -1.6
CHD1-211ENST00000514344 ATP10DQ9P241 1426 aa5.07□□□□□ -1.6
CHD1-211ENST00000514344 KIF1AQ12756 1690 aa5.06□□□□□ -1.6
CHD1-211ENST00000514344 PROM2Q8N271 834 aa5.06□□□□□ -1.6
CHD1-211ENST00000514344 SGIP1Q9BQI5 828 aa5.06□□□□□ -1.6
CHD1-211ENST00000514344 U3KPZ7 1027 aaPredicted RBP5.06□□□□□ -1.6
CHD1-211ENST00000514344 VGFO15240 615 aaPredicted RBP5.06□□□□□ -1.6
CHD1-211ENST00000514344 PAK3O75914 559 aaPredicted RBP5.05□□□□□ -1.6
CHD1-211ENST00000514344 EVA1CP58658 441 aa5.05□□□□□ -1.6
CHD1-211ENST00000514344 ZC3H6P61129 1189 aaKnown RBP5.05□□□□□ -1.6
CHD1-211ENST00000514344 SAFB2Q14151 953 aaKnown RBP eCLIP5.05□□□□□ -1.6
CHD1-211ENST00000514344 STK32BQ9NY57 414 aa5.05□□□□□ -1.6
CHD1-211ENST00000514344 SBNO1A3KN83 1393 aa5.05□□□□□ -1.6
CHD1-211ENST00000514344 KIAA0232Q92628 1395 aa5.05□□□□□ -1.6
CHD1-211ENST00000514344 PLSCR1O15162 318 aa5.05□□□□□ -1.6
CHD1-211ENST00000514344 SLC15A2Q16348 729 aa5.05□□□□□ -1.6
CHD1-211ENST00000514344 TMEM132EQ6IEE7 984 aa5.05□□□□□ -1.6
CHD1-211ENST00000514344 NLGN2Q8NFZ4 835 aa5.05□□□□□ -1.6
CHD1-211ENST00000514344 RRBP1Q9P2E9 1410 aaKnown RBP5.05□□□□□ -1.6
CHD1-211ENST00000514344 FMN2Q9NZ56 1722 aa5.05□□□□□ -1.6
CHD1-211ENST00000514344 YBX3P16989 372 aaKnown RBP eCLIP5.04□□□□□ -1.6
CHD1-211ENST00000514344 HTRA3P83110 453 aa5.04□□□□□ -1.6
CHD1-211ENST00000514344 LARP1Q6PKG0 1096 aaKnown RBP5.04□□□□□ -1.6
CHD1-211ENST00000514344 DNAJC5GQ8N7S2 189 aa5.04□□□□□ -1.6
CHD1-211ENST00000514344 TXNRD1Q16881 649 aa5.04□□□□□ -1.6
CHD1-211ENST00000514344 NUTM2GQ5VZR2 741 aa5.04□□□□□ -1.6
CHD1-211ENST00000514344 PRAG1Q86YV5 1406 aa5.03□□□□□ -1.6
CHD1-211ENST00000514344 NRXN1Q9ULB1 1477 aa5.03□□□□□ -1.6
CHD1-211ENST00000514344 CLTCL1P53675 1640 aa5.03□□□□□ -1.6
CHD1-211ENST00000514344 BARGINQ6ZT62 677 aa5.03□□□□□ -1.6
CHD1-211ENST00000514344 TCP11L2Q8N4U5 519 aa5.03□□□□□ -1.6
CHD1-211ENST00000514344 OVOS2A0A0G2JMS6 1433 aa5.03□□□□□ -1.6
CHD1-211ENST00000514344 OVOS2A0A0J9YW53 1432 aa5.03□□□□□ -1.6
CHD1-211ENST00000514344 APLP1P51693 650 aa5.03□□□□□ -1.6
CHD1-211ENST00000514344 OVOS2Q6IE36 1432 aa5.03□□□□□ -1.6
CHD1-211ENST00000514344 WWC3Q9ULE0 1092 aa5.03□□□□□ -1.6
CHD1-211ENST00000514344 VPS8Q8N3P4 1428 aa5.02□□□□□ -1.61
CHD1-211ENST00000514344 MAP3K5Q99683 1374 aa5.02□□□□□ -1.61
CHD1-211ENST00000514344 KIF1BO60333 1816 aa5.02□□□□□ -1.61
CHD1-211ENST00000514344 SSH2Q76I76 1423 aa5.02□□□□□ -1.61
CHD1-211ENST00000514344 ABCB7O75027 752 aa5.02□□□□□ -1.61
CHD1-211ENST00000514344 GPRASP1Q5JY77 1395 aa5.02□□□□□ -1.61
CHD1-211ENST00000514344 GRIN3BO60391 1043 aa5.01□□□□□ -1.61
CHD1-211ENST00000514344 ITGAEP38570 1179 aa5.01□□□□□ -1.61
CHD1-211ENST00000514344 SBF2Q86WG5 1849 aa5.01□□□□□ -1.61
CHD1-211ENST00000514344 IFT172Q9UG01 1749 aa5.01□□□□□ -1.61
CHD1-211ENST00000514344 RGPD3A6NKT7 1758 aaPredicted RBP5.01□□□□□ -1.61
CHD1-211ENST00000514344 RGPD4Q7Z3J3 1758 aa5.01□□□□□ -1.61
CHD1-211ENST00000514344 ALS2Q96Q42 1657 aa5.01□□□□□ -1.61
CHD1-211ENST00000514344 ADGRF5Q8IZF2 1346 aa5.01□□□□□ -1.61
CHD1-211ENST00000514344 KIF3CO14782 793 aa5.01□□□□□ -1.61
CHD1-211ENST00000514344 POLD1P28340 1107 aa5.01□□□□□ -1.61
CHD1-211ENST00000514344 DDB1Q16531 1140 aa5.01□□□□□ -1.61
CHD1-211ENST00000514344 HIRIP3Q9BW71 556 aaPredicted RBP5.01□□□□□ -1.61
CHD1-211ENST00000514344 PCDH10Q9P2E7 1040 aa5.01□□□□□ -1.61
CHD1-211ENST00000514344 TRPM3Q9HCF6 1732 aaPredicted RBP5□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms