RNA–Protein interactions for RNA: ENST00000513913.5

GRAMD2B-213, Transcript of GRAM domain containing 2B, humanhuman

TSL 4

Gene GRAMD2B, Length 586 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GRAMD2B-213ENST00000513913 PPIP5K1Q6PFW1 1433 aa33.93■■■■□ 3.02
GRAMD2B-213ENST00000513913 SLIT2O94813 1529 aa33.93■■■■□ 3.02
GRAMD2B-213ENST00000513913 UNC5CLQ8IV45 518 aa33.92■■■■□ 3.02
GRAMD2B-213ENST00000513913 PLCH1Q4KWH8 1693 aa33.92■■■■□ 3.02
GRAMD2B-213ENST00000513913 POLR3AO14802 1390 aaPredicted RBP33.91■■■■□ 3.02
GRAMD2B-213ENST00000513913 FAM83GA6ND36 823 aa33.91■■■■□ 3.02
GRAMD2B-213ENST00000513913 CARD11Q9BXL7 1154 aa33.9■■■■□ 3.02
GRAMD2B-213ENST00000513913 TNKS1BP1Q9C0C2 1729 aaKnown RBP33.9■■■■□ 3.02
GRAMD2B-213ENST00000513913 UPF1Q92900 1129 aaKnown RBP eCLIP33.89■■■■□ 3.02
GRAMD2B-213ENST00000513913 GJD4Q96KN9 370 aaPredicted RBP33.89■■■■□ 3.02
GRAMD2B-213ENST00000513913 CRYBG1Q9Y4K1 1723 aa33.88■■■■□ 3.01
GRAMD2B-213ENST00000513913 EVC2Q86UK5 1308 aa33.88■■■■□ 3.01
GRAMD2B-213ENST00000513913 CABP1Q9NZU7 370 aa33.88■■■■□ 3.01
GRAMD2B-213ENST00000513913 PCGF6Q9BYE7 350 aa33.85■■■■□ 3.01
GRAMD2B-213ENST00000513913 NWD2Q9ULI1 1742 aa33.83■■■■□ 3.01
GRAMD2B-213ENST00000513913 CCDC9Q9Y3X0 531 aaKnown RBP33.82■■■■□ 3
GRAMD2B-213ENST00000513913 RALGAPBQ86X10 1494 aa33.82■■■■□ 3
GRAMD2B-213ENST00000513913 GLI3P10071 1580 aa33.81■■■■□ 3
GRAMD2B-213ENST00000513913 ABTB2Q8N961 1025 aa33.81■■■■□ 3
GRAMD2B-213ENST00000513913 BTG4Q9NY30 223 aa33.81■■■■□ 3
GRAMD2B-213ENST00000513913 PHRF1Q9P1Y6 1649 aaKnown RBP33.79■■■■□ 3
GRAMD2B-213ENST00000513913 COL14A1Q05707 1796 aaKnown RBP33.77■■■■□ 3
GRAMD2B-213ENST00000513913 ZC3H6P61129 1189 aaKnown RBP33.77■■■■□ 3
GRAMD2B-213ENST00000513913 VPS72Q15906 364 aa33.77■■■■□ 3
GRAMD2B-213ENST00000513913 PRDM11Q9NQV5 511 aa33.76■■■□□ 2.99
GRAMD2B-213ENST00000513913 CHRNA2Q15822 529 aa33.75■■■□□ 2.99
GRAMD2B-213ENST00000513913 NRAPQ86VF7 1730 aa33.75■■■□□ 2.99
GRAMD2B-213ENST00000513913 KIAA0232Q92628 1395 aa33.73■■■□□ 2.99
GRAMD2B-213ENST00000513913 BRWD3Q6RI45 1802 aa33.71■■■□□ 2.99
GRAMD2B-213ENST00000513913 USP6P35125 1406 aa33.7■■■□□ 2.99
GRAMD2B-213ENST00000513913 NLRP13Q86W25 1043 aa33.68■■■□□ 2.98
GRAMD2B-213ENST00000513913 ATAD2Q6PL18 1390 aa33.68■■■□□ 2.98
GRAMD2B-213ENST00000513913 SEPT12Q8IYM1 358 aa33.67■■■□□ 2.98
GRAMD2B-213ENST00000513913 AKAP12Q02952 1782 aa33.67■■■□□ 2.98
GRAMD2B-213ENST00000513913 NRKQ7Z2Y5 1582 aa33.66■■■□□ 2.98
GRAMD2B-213ENST00000513913 NLRP6P59044 892 aa33.65■■■□□ 2.98
GRAMD2B-213ENST00000513913 SBNO2Q9Y2G9 1366 aa33.64■■■□□ 2.98
GRAMD2B-213ENST00000513913 A0A0G2JS52 829 aa33.64■■■□□ 2.98
GRAMD2B-213ENST00000513913 MYT1Q01538 1121 aa33.64■■■□□ 2.98
GRAMD2B-213ENST00000513913 STRN4Q9NRL3 753 aa33.64■■■□□ 2.98
GRAMD2B-213ENST00000513913 USP19O94966 1318 aa33.63■■■□□ 2.97
GRAMD2B-213ENST00000513913 ST20-MTHFSA0A0A6YYL1 179 aa33.62■■■□□ 2.97
GRAMD2B-213ENST00000513913 ZBTB7CA1YPR0 619 aa33.62■■■□□ 2.97
GRAMD2B-213ENST00000513913 FAM98CQ17RN3 349 aaKnown RBP33.62■■■□□ 2.97
GRAMD2B-213ENST00000513913 TMC1Q8TDI8 760 aa33.62■■■□□ 2.97
GRAMD2B-213ENST00000513913 EP400Q96L91 3159 aa33.62■■■□□ 2.97
GRAMD2B-213ENST00000513913 GCP02774 474 aa33.61■■■□□ 2.97
GRAMD2B-213ENST00000513913 PIK3C2AO00443 1686 aa33.61■■■□□ 2.97
GRAMD2B-213ENST00000513913 SSH2Q76I76 1423 aa33.61■■■□□ 2.97
GRAMD2B-213ENST00000513913 BRD4O60885 1362 aaPredicted RBP33.6■■■□□ 2.97
GRAMD2B-213ENST00000513913 ZNF692Q9BU19 519 aaPredicted RBP33.6■■■□□ 2.97
GRAMD2B-213ENST00000513913 TTC21BQ7Z4L5 1316 aa33.58■■■□□ 2.97
GRAMD2B-213ENST00000513913 KTN1Q86UP2 1357 aaKnown RBP33.58■■■□□ 2.97
GRAMD2B-213ENST00000513913 SPATA31A5Q5VU36 1347 aa33.57■■■□□ 2.97
GRAMD2B-213ENST00000513913 SPATA31A7Q8IWB4 1347 aa33.57■■■□□ 2.97
GRAMD2B-213ENST00000513913 ONECUT3O60422 494 aaPredicted RBP33.57■■■□□ 2.96
GRAMD2B-213ENST00000513913 SLC12A5Q9H2X9 1139 aa33.56■■■□□ 2.96
GRAMD2B-213ENST00000513913 CPSF1Q10570 1443 aaKnown RBP33.55■■■□□ 2.96
GRAMD2B-213ENST00000513913 EVA1CP58658 441 aa33.55■■■□□ 2.96
GRAMD2B-213ENST00000513913 TESK2Q96S53 571 aa33.54■■■□□ 2.96
GRAMD2B-213ENST00000513913 CAMTA1Q9Y6Y1 1673 aa33.54■■■□□ 2.96
GRAMD2B-213ENST00000513913 SOX12O15370 315 aa33.53■■■□□ 2.96
GRAMD2B-213ENST00000513913 SUGP2Q8IX01 1082 aaKnown RBP eCLIP33.53■■■□□ 2.96
GRAMD2B-213ENST00000513913 USP35Q9P2H5 1018 aa33.53■■■□□ 2.96
GRAMD2B-213ENST00000513913 MON2Q7Z3U7 1717 aa33.53■■■□□ 2.96
GRAMD2B-213ENST00000513913 CPDO75976 1380 aa33.52■■■□□ 2.96
GRAMD2B-213ENST00000513913 KRT27Q7Z3Y8 459 aa33.52■■■□□ 2.96
GRAMD2B-213ENST00000513913 LMO7Q8WWI1 1683 aa33.5■■■□□ 2.95
GRAMD2B-213ENST00000513913 ZRANB1Q9UGI0 708 aa33.5■■■□□ 2.95
GRAMD2B-213ENST00000513913 SPATA31A1Q5TZJ5 1347 aa33.5■■■□□ 2.95
GRAMD2B-213ENST00000513913 CD163L1Q9NR16 1453 aa33.5■■■□□ 2.95
GRAMD2B-213ENST00000513913 SLIT3O75094 1523 aa33.49■■■□□ 2.95
GRAMD2B-213ENST00000513913 CCER1Q8TC90 406 aaPredicted RBP33.49■■■□□ 2.95
GRAMD2B-213ENST00000513913 LARP1Q6PKG0 1096 aaKnown RBP33.48■■■□□ 2.95
GRAMD2B-213ENST00000513913 TTC21AQ8NDW8 1320 aa33.48■■■□□ 2.95
GRAMD2B-213ENST00000513913 CLSPNQ9HAW4 1339 aa33.48■■■□□ 2.95
GRAMD2B-213ENST00000513913 USP47Q96K76 1375 aa33.47■■■□□ 2.95
GRAMD2B-213ENST00000513913 FAM182BQ5T319 152 aa33.46■■■□□ 2.95
GRAMD2B-213ENST00000513913 HDGFL2Q7Z4V5 671 aaPredicted RBP33.46■■■□□ 2.95
GRAMD2B-213ENST00000513913 NME9Q86XW9 330 aa33.43■■■□□ 2.94
GRAMD2B-213ENST00000513913 TIMELESSQ9UNS1 1208 aa33.43■■■□□ 2.94
GRAMD2B-213ENST00000513913 THSD7AQ9UPZ6 1657 aa33.41■■■□□ 2.94
GRAMD2B-213ENST00000513913 RGPD5Q99666 1765 aa33.41■■■□□ 2.94
GRAMD2B-213ENST00000513913 A0A1W2PP64 1363 aa33.4■■■□□ 2.94
GRAMD2B-213ENST00000513913 PUS7Q96PZ0 661 aaKnown RBP33.4■■■□□ 2.94
GRAMD2B-213ENST00000513913 TERF2IPQ9NYB0 399 aa33.4■■■□□ 2.94
GRAMD2B-213ENST00000513913 COL18A1P39060 1754 aa33.39■■■□□ 2.94
GRAMD2B-213ENST00000513913 COL5A2P05997 1499 aaPredicted RBP33.39■■■□□ 2.94
GRAMD2B-213ENST00000513913 CCDC125Q86Z20 511 aa33.39■■■□□ 2.94
GRAMD2B-213ENST00000513913 KCNH5Q8NCM2 988 aa33.38■■■□□ 2.93
GRAMD2B-213ENST00000513913 AXIN2Q9Y2T1 843 aa33.38■■■□□ 2.93
GRAMD2B-213ENST00000513913 AATKQ6ZMQ8 1374 aa33.37■■■□□ 2.93
GRAMD2B-213ENST00000513913 TMF1P82094 1093 aa33.36■■■□□ 2.93
GRAMD2B-213ENST00000513913 ARHGEF25Q86VW2 580 aa33.36■■■□□ 2.93
GRAMD2B-213ENST00000513913 BLMP54132 1417 aaPredicted RBP33.35■■■□□ 2.93
GRAMD2B-213ENST00000513913 DEFB132Q7Z7B7 95 aa33.34■■■□□ 2.93
GRAMD2B-213ENST00000513913 TCP11L2Q8N4U5 519 aa33.34■■■□□ 2.93
GRAMD2B-213ENST00000513913 SLC24A1O60721 1099 aa33.33■■■□□ 2.93
GRAMD2B-213ENST00000513913 EDC4Q6P2E9 1401 aaKnown RBP33.33■■■□□ 2.93
GRAMD2B-213ENST00000513913 NFAT5O94916 1531 aa33.32■■■□□ 2.92
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms