RNA–Protein interactions for RNA: ENST00000513639.5

HTT-212, Transcript of huntingtin, humanhuman

TSL 2

Gene HTT, Length 259 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HTT-212ENST00000513639 BTG4Q9NY30 223 aa10.42□□□□□ -0.74
HTT-212ENST00000513639 SLIT2O94813 1529 aa10.42□□□□□ -0.74
HTT-212ENST00000513639 TULP4Q9NRJ4 1543 aa10.42□□□□□ -0.74
HTT-212ENST00000513639 EVC2Q86UK5 1308 aa10.41□□□□□ -0.74
HTT-212ENST00000513639 ADGRB2O60241 1585 aa10.41□□□□□ -0.74
HTT-212ENST00000513639 TRIM26Q12899 539 aaPredicted RBP10.41□□□□□ -0.74
HTT-212ENST00000513639 SEPT12Q8IYM1 358 aa10.41□□□□□ -0.74
HTT-212ENST00000513639 CABP2Q9NPB3 220 aa10.41□□□□□ -0.74
HTT-212ENST00000513639 PRDM11Q9NQV5 511 aa10.41□□□□□ -0.74
HTT-212ENST00000513639 RNF216Q9NWF9 866 aaPredicted RBP10.41□□□□□ -0.74
HTT-212ENST00000513639 NLRP13Q86W25 1043 aa10.4□□□□□ -0.74
HTT-212ENST00000513639 ZNF692Q9BU19 519 aaPredicted RBP10.4□□□□□ -0.74
HTT-212ENST00000513639 CABP1Q9NZU7 370 aa10.4□□□□□ -0.74
HTT-212ENST00000513639 POLR3AO14802 1390 aaPredicted RBP10.39□□□□□ -0.75
HTT-212ENST00000513639 BRD4O60885 1362 aaPredicted RBP10.39□□□□□ -0.75
HTT-212ENST00000513639 EVA1CP58658 441 aa10.39□□□□□ -0.75
HTT-212ENST00000513639 SF3B2Q13435 895 aaKnown RBP10.39□□□□□ -0.75
HTT-212ENST00000513639 KRT27Q7Z3Y8 459 aa10.39□□□□□ -0.75
HTT-212ENST00000513639 RALGAPBQ86X10 1494 aa10.38□□□□□ -0.75
HTT-212ENST00000513639 A0A0G2JS52 829 aa10.38□□□□□ -0.75
HTT-212ENST00000513639 SLC24A1O60721 1099 aa10.38□□□□□ -0.75
HTT-212ENST00000513639 ZC3H6P61129 1189 aaKnown RBP10.38□□□□□ -0.75
HTT-212ENST00000513639 MYT1Q01538 1121 aa10.38□□□□□ -0.75
HTT-212ENST00000513639 NUTM2GQ5VZR2 741 aa10.38□□□□□ -0.75
HTT-212ENST00000513639 ZRANB1Q9UGI0 708 aa10.38□□□□□ -0.75
HTT-212ENST00000513639 RGPD8O14715 1765 aaPredicted RBP10.38□□□□□ -0.75
HTT-212ENST00000513639 KIAA1210Q9ULL0 1709 aa10.38□□□□□ -0.75
HTT-212ENST00000513639 ROCK2O75116 1388 aaKnown RBP10.38□□□□□ -0.75
HTT-212ENST00000513639 FAM98CQ17RN3 349 aaKnown RBP10.37□□□□□ -0.75
HTT-212ENST00000513639 EP400Q96L91 3159 aa10.37□□□□□ -0.75
HTT-212ENST00000513639 USP32Q8NFA0 1604 aa10.36□□□□□ -0.75
HTT-212ENST00000513639 SPATA31A5Q5VU36 1347 aa10.36□□□□□ -0.75
HTT-212ENST00000513639 SPATA31A7Q8IWB4 1347 aa10.36□□□□□ -0.75
HTT-212ENST00000513639 SRCAPQ6ZRS2 3230 aa10.36□□□□□ -0.75
HTT-212ENST00000513639 GCP02774 474 aa10.36□□□□□ -0.75
HTT-212ENST00000513639 NLRP6P59044 892 aa10.36□□□□□ -0.75
HTT-212ENST00000513639 CARD11Q9BXL7 1154 aa10.36□□□□□ -0.75
HTT-212ENST00000513639 ATP7BP35670 1465 aa10.36□□□□□ -0.75
HTT-212ENST00000513639 PPIP5K1Q6PFW1 1433 aa10.35□□□□□ -0.75
HTT-212ENST00000513639 CHRNA2Q15822 529 aa10.35□□□□□ -0.75
HTT-212ENST00000513639 KIAA0232Q92628 1395 aa10.35□□□□□ -0.75
HTT-212ENST00000513639 MARF1Q9Y4F3 1742 aaKnown RBP10.34□□□□□ -0.75
HTT-212ENST00000513639 STRN4Q9NRL3 753 aa10.34□□□□□ -0.75
HTT-212ENST00000513639 TONSLQ96HA7 1378 aa10.34□□□□□ -0.75
HTT-212ENST00000513639 KCNH5Q8NCM2 988 aa10.33□□□□□ -0.76
HTT-212ENST00000513639 PUS7Q96PZ0 661 aaKnown RBP10.33□□□□□ -0.76
HTT-212ENST00000513639 ARHGEF28Q8N1W1 1705 aaKnown RBP10.33□□□□□ -0.76
HTT-212ENST00000513639 BLMP54132 1417 aaPredicted RBP10.33□□□□□ -0.76
HTT-212ENST00000513639 SPATA31A1Q5TZJ5 1347 aa10.33□□□□□ -0.76
HTT-212ENST00000513639 CPDO75976 1380 aa10.32□□□□□ -0.76
HTT-212ENST00000513639 BARGINQ6ZT62 677 aa10.32□□□□□ -0.76
HTT-212ENST00000513639 THRAP3Q9Y2W1 955 aaKnown RBP10.32□□□□□ -0.76
HTT-212ENST00000513639 USP19O94966 1318 aa10.32□□□□□ -0.76
HTT-212ENST00000513639 TNKS1BP1Q9C0C2 1729 aaKnown RBP10.31□□□□□ -0.76
HTT-212ENST00000513639 C11orf95C9JLR9 678 aaPredicted RBP10.31□□□□□ -0.76
HTT-212ENST00000513639 BAG6P46379 1132 aa10.31□□□□□ -0.76
HTT-212ENST00000513639 PDE3BQ13370 1112 aa10.31□□□□□ -0.76
HTT-212ENST00000513639 FAM196AQ6ZSG2 479 aa10.31□□□□□ -0.76
HTT-212ENST00000513639 TCP11L2Q8N4U5 519 aa10.31□□□□□ -0.76
HTT-212ENST00000513639 USP35Q9P2H5 1018 aa10.31□□□□□ -0.76
HTT-212ENST00000513639 TTC21AQ8NDW8 1320 aa10.31□□□□□ -0.76
HTT-212ENST00000513639 ITSN1Q15811 1721 aa10.3□□□□□ -0.76
HTT-212ENST00000513639 TRPM3Q9HCF6 1732 aaPredicted RBP10.3□□□□□ -0.76
HTT-212ENST00000513639 NWD2Q9ULI1 1742 aa10.3□□□□□ -0.76
HTT-212ENST00000513639 TMC1Q8TDI8 760 aa10.3□□□□□ -0.76
HTT-212ENST00000513639 ALS2Q96Q42 1657 aa10.3□□□□□ -0.76
HTT-212ENST00000513639 GLI3P10071 1580 aa10.3□□□□□ -0.76
HTT-212ENST00000513639 TTC21BQ7Z4L5 1316 aa10.3□□□□□ -0.76
HTT-212ENST00000513639 COL14A1Q05707 1796 aaKnown RBP10.29□□□□□ -0.76
HTT-212ENST00000513639 LARP1Q6PKG0 1096 aaKnown RBP10.29□□□□□ -0.76
HTT-212ENST00000513639 HDGFL2Q7Z4V5 671 aaPredicted RBP10.29□□□□□ -0.76
HTT-212ENST00000513639 TERF2IPQ9NYB0 399 aa10.29□□□□□ -0.76
HTT-212ENST00000513639 TIMELESSQ9UNS1 1208 aa10.29□□□□□ -0.76
HTT-212ENST00000513639 USP6P35125 1406 aa10.29□□□□□ -0.76
HTT-212ENST00000513639 KTN1Q86UP2 1357 aaKnown RBP10.28□□□□□ -0.76
HTT-212ENST00000513639 SBNO2Q9Y2G9 1366 aa10.28□□□□□ -0.76
HTT-212ENST00000513639 ZBTB7CA1YPR0 619 aa10.28□□□□□ -0.76
HTT-212ENST00000513639 DEFB132Q7Z7B7 95 aa10.28□□□□□ -0.76
HTT-212ENST00000513639 AATKQ6ZMQ8 1374 aa10.27□□□□□ -0.76
HTT-212ENST00000513639 ARHGEF25Q86VW2 580 aa10.27□□□□□ -0.77
HTT-212ENST00000513639 CDCA7Q9BWT1 371 aaPredicted RBP10.27□□□□□ -0.77
HTT-212ENST00000513639 SSH2Q76I76 1423 aa10.26□□□□□ -0.77
HTT-212ENST00000513639 ST20-MTHFSA0A0A6YYL1 179 aa10.26□□□□□ -0.77
HTT-212ENST00000513639 TOM1L2Q6ZVM7 507 aa10.26□□□□□ -0.77
HTT-212ENST00000513639 SLC12A5Q9H2X9 1139 aa10.26□□□□□ -0.77
HTT-212ENST00000513639 HOXD11P31277 338 aaPredicted RBP10.25□□□□□ -0.77
HTT-212ENST00000513639 FAM182BQ5T319 152 aa10.25□□□□□ -0.77
HTT-212ENST00000513639 SUGP2Q8IX01 1082 aaKnown RBP eCLIP10.25□□□□□ -0.77
HTT-212ENST00000513639 TRPM1Q7Z4N2 1603 aa10.25□□□□□ -0.77
HTT-212ENST00000513639 PLCH1Q4KWH8 1693 aa10.25□□□□□ -0.77
HTT-212ENST00000513639 CPSF1Q10570 1443 aaKnown RBP10.24□□□□□ -0.77
HTT-212ENST00000513639 TRIM37O94972 964 aa10.24□□□□□ -0.77
HTT-212ENST00000513639 APBA3O96018 575 aa10.24□□□□□ -0.77
HTT-212ENST00000513639 CSB-PGBD3P0DP91 1061 aa10.24□□□□□ -0.77
HTT-212ENST00000513639 EN1Q05925 392 aaPredicted RBP10.24□□□□□ -0.77
HTT-212ENST00000513639 CDCA8Q53HL2 280 aa10.24□□□□□ -0.77
HTT-212ENST00000513639 AXIN2Q9Y2T1 843 aa10.24□□□□□ -0.77
HTT-212ENST00000513639 TOPAZ1Q8N9V7 1692 aa10.23□□□□□ -0.77
HTT-212ENST00000513639 QRICH2Q9H0J4 1663 aa10.23□□□□□ -0.77
HTT-212ENST00000513639 CAMTA1Q9Y6Y1 1673 aa10.23□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 44.9 ms