RNA–Protein interactions for RNA: ENST00000513416.5

SEL1L3-210, Transcript of SEL1L family member 3, humanhuman

TSL 2

Gene SEL1L3, Length 2,344 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEL1L3-210ENST00000513416 AATKQ6ZMQ8 1374 aa12.81□□□□□ -0.36
SEL1L3-210ENST00000513416 WDR43Q15061 677 aaKnown RBP eCLIP12.8□□□□□ -0.36
SEL1L3-210ENST00000513416 C19orf44Q9H6X5 657 aa12.8□□□□□ -0.36
SEL1L3-210ENST00000513416 TTC21BQ7Z4L5 1316 aa12.8□□□□□ -0.36
SEL1L3-210ENST00000513416 GGNBP2Q9H3C7 697 aa12.8□□□□□ -0.36
SEL1L3-210ENST00000513416 SHPRHQ149N8 1683 aa12.8□□□□□ -0.36
SEL1L3-210ENST00000513416 SMG6Q86US8 1419 aaKnown RBP12.8□□□□□ -0.36
SEL1L3-210ENST00000513416 USP31Q70CQ4 1352 aa12.79□□□□□ -0.36
SEL1L3-210ENST00000513416 C14orf37Q86TY3 774 aa12.79□□□□□ -0.36
SEL1L3-210ENST00000513416 COG3Q96JB2 828 aa12.79□□□□□ -0.36
SEL1L3-210ENST00000513416 NGDNQ8NEJ9 315 aaKnown RBP12.78□□□□□ -0.36
SEL1L3-210ENST00000513416 OVOS2A0A0J9YW53 1432 aa12.78□□□□□ -0.36
SEL1L3-210ENST00000513416 OVOS2Q6IE36 1432 aa12.78□□□□□ -0.36
SEL1L3-210ENST00000513416 TMEM94Q12767 1356 aa12.78□□□□□ -0.36
SEL1L3-210ENST00000513416 SUGP2Q8IX01 1082 aaKnown RBP eCLIP12.78□□□□□ -0.36
SEL1L3-210ENST00000513416 PHF8Q9UPP1 1060 aa12.78□□□□□ -0.36
SEL1L3-210ENST00000513416 XIRP1Q702N8 1843 aaKnown RBP12.77□□□□□ -0.37
SEL1L3-210ENST00000513416 PNPLA6Q8IY17 1366 aa12.77□□□□□ -0.37
SEL1L3-210ENST00000513416 MTHFSP49914 203 aa12.77□□□□□ -0.37
SEL1L3-210ENST00000513416 NGEFQ8N5V2 710 aa12.77□□□□□ -0.37
SEL1L3-210ENST00000513416 COL3A1P02461 1466 aaPredicted RBP12.76□□□□□ -0.37
SEL1L3-210ENST00000513416 C1orf167Q5SNV9 1468 aa12.76□□□□□ -0.37
SEL1L3-210ENST00000513416 CDK12Q9NYV4 1490 aaPredicted RBP12.76□□□□□ -0.37
SEL1L3-210ENST00000513416 MSH6P52701 1360 aa12.76□□□□□ -0.37
SEL1L3-210ENST00000513416 MAP2P11137 1827 aaKnown RBP12.76□□□□□ -0.37
SEL1L3-210ENST00000513416 PIK3C2AO00443 1686 aa12.76□□□□□ -0.37
SEL1L3-210ENST00000513416 NUTM2FA1L443 756 aa12.76□□□□□ -0.37
SEL1L3-210ENST00000513416 CADPS2Q86UW7 1296 aa12.75□□□□□ -0.37
SEL1L3-210ENST00000513416 NME9Q86XW9 330 aa12.75□□□□□ -0.37
SEL1L3-210ENST00000513416 ATF3P18847 181 aa12.74□□□□□ -0.37
SEL1L3-210ENST00000513416 PMFBP1Q8TBY8 1022 aa12.74□□□□□ -0.37
SEL1L3-210ENST00000513416 MST1RQ04912 1400 aa12.74□□□□□ -0.37
SEL1L3-210ENST00000513416 ADAMTS8Q9UP79 889 aa12.74□□□□□ -0.37
SEL1L3-210ENST00000513416 NUDCQ9Y266 331 aa12.74□□□□□ -0.37
SEL1L3-210ENST00000513416 TNNT2P45379 298 aaPredicted RBP12.73□□□□□ -0.37
SEL1L3-210ENST00000513416 NCBP3Q53F19 620 aaKnown RBP12.73□□□□□ -0.37
SEL1L3-210ENST00000513416 KIF24Q5T7B8 1368 aa12.72□□□□□ -0.37
SEL1L3-210ENST00000513416 PDE3BQ13370 1112 aa12.72□□□□□ -0.37
SEL1L3-210ENST00000513416 ESCO1Q5FWF5 840 aa12.72□□□□□ -0.37
SEL1L3-210ENST00000513416 TRPM3Q9HCF6 1732 aaPredicted RBP12.72□□□□□ -0.37
SEL1L3-210ENST00000513416 MARF1Q9Y4F3 1742 aaKnown RBP12.72□□□□□ -0.37
SEL1L3-210ENST00000513416 POLKQ9UBT6 870 aa12.72□□□□□ -0.37
SEL1L3-210ENST00000513416 PNNQ9H307 717 aaKnown RBP12.71□□□□□ -0.37
SEL1L3-210ENST00000513416 RBM33Q96EV2 1170 aaKnown RBP12.7□□□□□ -0.38
SEL1L3-210ENST00000513416 DIAPH1O60610 1272 aaKnown RBP12.7□□□□□ -0.38
SEL1L3-210ENST00000513416 PSME1Q06323 249 aa12.69□□□□□ -0.38
SEL1L3-210ENST00000513416 ZNF335Q9H4Z2 1342 aaPredicted RBP12.69□□□□□ -0.38
SEL1L3-210ENST00000513416 PHRF1Q9P1Y6 1649 aaKnown RBP12.68□□□□□ -0.38
SEL1L3-210ENST00000513416 RUNDC1Q96C34 613 aa12.68□□□□□ -0.38
SEL1L3-210ENST00000513416 ZRANB1Q9UGI0 708 aa12.67□□□□□ -0.38
SEL1L3-210ENST00000513416 ALS2Q96Q42 1657 aa12.67□□□□□ -0.38
SEL1L3-210ENST00000513416 SBNO1A3KN83 1393 aa12.67□□□□□ -0.38
SEL1L3-210ENST00000513416 RTL1A6NKG5 1358 aa12.67□□□□□ -0.38
SEL1L3-210ENST00000513416 IQSEC2Q5JU85 1478 aa12.67□□□□□ -0.38
SEL1L3-210ENST00000513416 SLIT3O75094 1523 aa12.66□□□□□ -0.38
SEL1L3-210ENST00000513416 ABTB2Q8N961 1025 aa12.66□□□□□ -0.38
SEL1L3-210ENST00000513416 ORAI2Q96SN7 254 aa12.66□□□□□ -0.38
SEL1L3-210ENST00000513416 GTF3C3Q9Y5Q9 886 aa12.66□□□□□ -0.38
SEL1L3-210ENST00000513416 NPHP3Q7Z494 1330 aa12.66□□□□□ -0.38
SEL1L3-210ENST00000513416 NLRP6P59044 892 aa12.66□□□□□ -0.38
SEL1L3-210ENST00000513416 FLT4P35916 1363 aa12.65□□□□□ -0.38
SEL1L3-210ENST00000513416 KCNH5Q8NCM2 988 aa12.65□□□□□ -0.38
SEL1L3-210ENST00000513416 PEAK1Q9H792 1746 aa12.65□□□□□ -0.38
SEL1L3-210ENST00000513416 U2AF1L5P0DN76 240 aaPredicted RBP12.65□□□□□ -0.39
SEL1L3-210ENST00000513416 U2AF1Q01081 240 aaKnown RBP eCLIP12.65□□□□□ -0.39
SEL1L3-210ENST00000513416 EMILIN1Q9Y6C2 1016 aa12.65□□□□□ -0.39
SEL1L3-210ENST00000513416 NFAT5O94916 1531 aa12.65□□□□□ -0.39
SEL1L3-210ENST00000513416 PAK3O75914 559 aaPredicted RBP12.64□□□□□ -0.39
SEL1L3-210ENST00000513416 FCHSD2O94868 740 aa12.64□□□□□ -0.39
SEL1L3-210ENST00000513416 KRT28Q7Z3Y7 464 aa12.64□□□□□ -0.39
SEL1L3-210ENST00000513416 IL13P35225 146 aa12.63□□□□□ -0.39
SEL1L3-210ENST00000513416 RGPD1P0DJD0 1748 aa12.63□□□□□ -0.39
SEL1L3-210ENST00000513416 ZNF521Q96K83 1311 aa12.63□□□□□ -0.39
SEL1L3-210ENST00000513416 FOXO3O43524 673 aa12.63□□□□□ -0.39
SEL1L3-210ENST00000513416 CCDC27Q2M243 656 aa12.63□□□□□ -0.39
SEL1L3-210ENST00000513416 LTN1O94822 1766 aa12.63□□□□□ -0.39
SEL1L3-210ENST00000513416 PXDNQ92626 1479 aa12.63□□□□□ -0.39
SEL1L3-210ENST00000513416 USP19O94966 1318 aa12.63□□□□□ -0.39
SEL1L3-210ENST00000513416 MED1Q15648 1581 aaPredicted RBP12.63□□□□□ -0.39
SEL1L3-210ENST00000513416 LTBP4Q8N2S1 1624 aa12.62□□□□□ -0.39
SEL1L3-210ENST00000513416 U2SURPO15042 1029 aaKnown RBP12.62□□□□□ -0.39
SEL1L3-210ENST00000513416 RRS1Q15050 365 aaKnown RBP12.62□□□□□ -0.39
SEL1L3-210ENST00000513416 ABCC6O95255 1503 aa12.62□□□□□ -0.39
SEL1L3-210ENST00000513416 TNS3Q68CZ2 1445 aa12.61□□□□□ -0.39
SEL1L3-210ENST00000513416 PPM1GO15355 546 aaPredicted RBP12.61□□□□□ -0.39
SEL1L3-210ENST00000513416 NEFMP07197 916 aa12.61□□□□□ -0.39
SEL1L3-210ENST00000513416 MAP3K19Q56UN5 1328 aa12.61□□□□□ -0.39
SEL1L3-210ENST00000513416 NHSL1Q5SYE7 1610 aa12.61□□□□□ -0.39
SEL1L3-210ENST00000513416 ARHGEF10O15013 1369 aa12.61□□□□□ -0.39
SEL1L3-210ENST00000513416 APAF1O14727 1248 aa12.61□□□□□ -0.39
SEL1L3-210ENST00000513416 CCDC146Q8IYE0 955 aa12.61□□□□□ -0.39
SEL1L3-210ENST00000513416 PLEKHF1Q96S99 279 aa12.61□□□□□ -0.39
SEL1L3-210ENST00000513416 SLAIN2Q9P270 581 aa12.61□□□□□ -0.39
SEL1L3-210ENST00000513416 MAPK8IP3Q9UPT6 1336 aa12.61□□□□□ -0.39
SEL1L3-210ENST00000513416 AMPHP49418 695 aa12.59□□□□□ -0.39
SEL1L3-210ENST00000513416 GOLGA2Q08379 1002 aa12.59□□□□□ -0.39
SEL1L3-210ENST00000513416 AEBP2Q6ZN18 517 aaPredicted RBP12.59□□□□□ -0.39
SEL1L3-210ENST00000513416 BRINP3Q76B58 766 aa12.59□□□□□ -0.39
SEL1L3-210ENST00000513416 TCP11L2Q8N4U5 519 aa12.59□□□□□ -0.39
SEL1L3-210ENST00000513416 PHF23Q9BUL5 403 aaPredicted RBP12.59□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms