RNA–Protein interactions for RNA: ENST00000513243.5

DDR1-272, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

TSL 5

Gene DDR1, Length 549 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-272ENST00000513243 USP21Q9UK80 565 aa25.13■■□□□ 1.61
DDR1-272ENST00000513243 MARF1Q9Y4F3 1742 aaKnown RBP25.12■■□□□ 1.61
DDR1-272ENST00000513243 RXRBP28702 533 aa25.11■■□□□ 1.61
DDR1-272ENST00000513243 ST20-MTHFSA0A0A6YYL1 179 aa25.09■■□□□ 1.61
DDR1-272ENST00000513243 ABCA3Q99758 1704 aa25.08■■□□□ 1.61
DDR1-272ENST00000513243 BCL9LQ86UU0 1499 aa25.08■■□□□ 1.6
DDR1-272ENST00000513243 ATAD2Q6PL18 1390 aa25.06■■□□□ 1.6
DDR1-272ENST00000513243 NUTM2GQ5VZR2 741 aa25.06■■□□□ 1.6
DDR1-272ENST00000513243 TESK2Q96S53 571 aa25.06■■□□□ 1.6
DDR1-272ENST00000513243 RBM6P78332 1123 aaKnown RBP25.05■■□□□ 1.6
DDR1-272ENST00000513243 TRPC5Q9UL62 973 aaPredicted RBP25.05■■□□□ 1.6
DDR1-272ENST00000513243 SLIT2O94813 1529 aa25.04■■□□□ 1.6
DDR1-272ENST00000513243 ABTB2Q8N961 1025 aa25.04■■□□□ 1.6
DDR1-272ENST00000513243 ATRNO75882 1429 aa25.03■■□□□ 1.6
DDR1-272ENST00000513243 USP6P35125 1406 aa25.03■■□□□ 1.6
DDR1-272ENST00000513243 FAM83GA6ND36 823 aa25.03■■□□□ 1.6
DDR1-272ENST00000513243 BRD4O60885 1362 aaPredicted RBP25.03■■□□□ 1.6
DDR1-272ENST00000513243 USP47Q96K76 1375 aa25.03■■□□□ 1.6
DDR1-272ENST00000513243 CRYBG1Q9Y4K1 1723 aa25.01■■□□□ 1.59
DDR1-272ENST00000513243 UNC5CLQ8IV45 518 aa25.01■■□□□ 1.59
DDR1-272ENST00000513243 ZNF692Q9BU19 519 aaPredicted RBP25■■□□□ 1.59
DDR1-272ENST00000513243 SSH2Q76I76 1423 aa25■■□□□ 1.59
DDR1-272ENST00000513243 CDK12Q9NYV4 1490 aaPredicted RBP25■■□□□ 1.59
DDR1-272ENST00000513243 PUS7Q96PZ0 661 aaKnown RBP24.99■■□□□ 1.59
DDR1-272ENST00000513243 CPSF1Q10570 1443 aaKnown RBP24.98■■□□□ 1.59
DDR1-272ENST00000513243 SLC24A1O60721 1099 aa24.97■■□□□ 1.59
DDR1-272ENST00000513243 NLRP13Q86W25 1043 aa24.96■■□□□ 1.59
DDR1-272ENST00000513243 TMC1Q8TDI8 760 aa24.96■■□□□ 1.59
DDR1-272ENST00000513243 SLC12A5Q9H2X9 1139 aa24.96■■□□□ 1.59
DDR1-272ENST00000513243 TNKS1BP1Q9C0C2 1729 aaKnown RBP24.95■■□□□ 1.59
DDR1-272ENST00000513243 PLCH1Q4KWH8 1693 aa24.95■■□□□ 1.58
DDR1-272ENST00000513243 USP19O94966 1318 aa24.95■■□□□ 1.58
DDR1-272ENST00000513243 GJD4Q96KN9 370 aaPredicted RBP24.95■■□□□ 1.58
DDR1-272ENST00000513243 RGS12O14924 1447 aa24.95■■□□□ 1.58
DDR1-272ENST00000513243 PHRF1Q9P1Y6 1649 aaKnown RBP24.94■■□□□ 1.58
DDR1-272ENST00000513243 TTC21BQ7Z4L5 1316 aa24.94■■□□□ 1.58
DDR1-272ENST00000513243 ZC3H6P61129 1189 aaKnown RBP24.94■■□□□ 1.58
DDR1-272ENST00000513243 PRDM11Q9NQV5 511 aa24.94■■□□□ 1.58
DDR1-272ENST00000513243 AKAP12Q02952 1782 aa24.94■■□□□ 1.58
DDR1-272ENST00000513243 KTN1Q86UP2 1357 aaKnown RBP24.93■■□□□ 1.58
DDR1-272ENST00000513243 KIAA0232Q92628 1395 aa24.93■■□□□ 1.58
DDR1-272ENST00000513243 NWD2Q9ULI1 1742 aa24.93■■□□□ 1.58
DDR1-272ENST00000513243 NLRP6P59044 892 aa24.93■■□□□ 1.58
DDR1-272ENST00000513243 BTG4Q9NY30 223 aa24.93■■□□□ 1.58
DDR1-272ENST00000513243 CD163L1Q9NR16 1453 aa24.93■■□□□ 1.58
DDR1-272ENST00000513243 COL14A1Q05707 1796 aaKnown RBP24.92■■□□□ 1.58
DDR1-272ENST00000513243 GCP02774 474 aa24.91■■□□□ 1.58
DDR1-272ENST00000513243 CHRNA2Q15822 529 aa24.91■■□□□ 1.58
DDR1-272ENST00000513243 VPS72Q15906 364 aa24.91■■□□□ 1.58
DDR1-272ENST00000513243 TMF1P82094 1093 aa24.9■■□□□ 1.58
DDR1-272ENST00000513243 TTC21AQ8NDW8 1320 aa24.89■■□□□ 1.58
DDR1-272ENST00000513243 NRKQ7Z2Y5 1582 aa24.89■■□□□ 1.58
DDR1-272ENST00000513243 PIK3C2AO00443 1686 aa24.89■■□□□ 1.58
DDR1-272ENST00000513243 HDGFL2Q7Z4V5 671 aaPredicted RBP24.88■■□□□ 1.57
DDR1-272ENST00000513243 GLI3P10071 1580 aa24.88■■□□□ 1.57
DDR1-272ENST00000513243 MON2Q7Z3U7 1717 aa24.87■■□□□ 1.57
DDR1-272ENST00000513243 TERF2IPQ9NYB0 399 aa24.87■■□□□ 1.57
DDR1-272ENST00000513243 CCDC9Q9Y3X0 531 aaKnown RBP24.87■■□□□ 1.57
DDR1-272ENST00000513243 NRAPQ86VF7 1730 aa24.86■■□□□ 1.57
DDR1-272ENST00000513243 CPDO75976 1380 aa24.86■■□□□ 1.57
DDR1-272ENST00000513243 SUGP2Q8IX01 1082 aaKnown RBP eCLIP24.86■■□□□ 1.57
DDR1-272ENST00000513243 A0A1W2PP64 1363 aa24.85■■□□□ 1.57
DDR1-272ENST00000513243 NINLQ9Y2I6 1382 aa24.85■■□□□ 1.57
DDR1-272ENST00000513243 SLIT3O75094 1523 aa24.84■■□□□ 1.57
DDR1-272ENST00000513243 ZRANB1Q9UGI0 708 aa24.82■■□□□ 1.56
DDR1-272ENST00000513243 EDC4Q6P2E9 1401 aaKnown RBP24.81■■□□□ 1.56
DDR1-272ENST00000513243 CDCA8Q53HL2 280 aa24.81■■□□□ 1.56
DDR1-272ENST00000513243 NME9Q86XW9 330 aa24.81■■□□□ 1.56
DDR1-272ENST00000513243 ONECUT3O60422 494 aaPredicted RBP24.8■■□□□ 1.56
DDR1-272ENST00000513243 USP31Q70CQ4 1352 aa24.8■■□□□ 1.56
DDR1-272ENST00000513243 CAMTA1Q9Y6Y1 1673 aa24.79■■□□□ 1.56
DDR1-272ENST00000513243 EIF4G2P78344 907 aaKnown RBP eCLIP24.79■■□□□ 1.56
DDR1-272ENST00000513243 UPF1Q92900 1129 aaKnown RBP eCLIP24.79■■□□□ 1.56
DDR1-272ENST00000513243 STRN4Q9NRL3 753 aa24.79■■□□□ 1.56
DDR1-272ENST00000513243 SPATA31A5Q5VU36 1347 aa24.79■■□□□ 1.56
DDR1-272ENST00000513243 SPATA31A7Q8IWB4 1347 aa24.79■■□□□ 1.56
DDR1-272ENST00000513243 HSPA5P11021 654 aaKnown RBP24.78■■□□□ 1.56
DDR1-272ENST00000513243 KCNH5Q8NCM2 988 aa24.78■■□□□ 1.56
DDR1-272ENST00000513243 ZBTB7CA1YPR0 619 aa24.77■■□□□ 1.56
DDR1-272ENST00000513243 SOX12O15370 315 aa24.77■■□□□ 1.56
DDR1-272ENST00000513243 EVA1CP58658 441 aa24.77■■□□□ 1.56
DDR1-272ENST00000513243 SEPT12Q8IYM1 358 aa24.77■■□□□ 1.56
DDR1-272ENST00000513243 LMO7Q8WWI1 1683 aa24.77■■□□□ 1.56
DDR1-272ENST00000513243 AATKQ6ZMQ8 1374 aa24.76■■□□□ 1.55
DDR1-272ENST00000513243 ANKRD36BQ8N2N9 1353 aa24.76■■□□□ 1.55
DDR1-272ENST00000513243 FAM98CQ17RN3 349 aaKnown RBP24.75■■□□□ 1.55
DDR1-272ENST00000513243 ARHGEF25Q86VW2 580 aa24.75■■□□□ 1.55
DDR1-272ENST00000513243 SPATA31A1Q5TZJ5 1347 aa24.74■■□□□ 1.55
DDR1-272ENST00000513243 LARP1Q6PKG0 1096 aaKnown RBP24.73■■□□□ 1.55
DDR1-272ENST00000513243 NFAT5O94916 1531 aa24.72■■□□□ 1.55
DDR1-272ENST00000513243 USP54Q70EL1 1684 aa24.72■■□□□ 1.55
DDR1-272ENST00000513243 AXIN2Q9Y2T1 843 aa24.71■■□□□ 1.55
DDR1-272ENST00000513243 COL5A2P05997 1499 aaPredicted RBP24.7■■□□□ 1.55
DDR1-272ENST00000513243 COL18A1P39060 1754 aa24.7■■□□□ 1.54
DDR1-272ENST00000513243 OVOS2A0A0J9YW53 1432 aa24.69■■□□□ 1.54
DDR1-272ENST00000513243 OVOS2Q6IE36 1432 aa24.69■■□□□ 1.54
DDR1-272ENST00000513243 A0A0G2JS52 829 aa24.69■■□□□ 1.54
DDR1-272ENST00000513243 MYT1Q01538 1121 aa24.69■■□□□ 1.54
DDR1-272ENST00000513243 USP35Q9P2H5 1018 aa24.69■■□□□ 1.54
DDR1-272ENST00000513243 BRWD3Q6RI45 1802 aa24.68■■□□□ 1.54
Retrieved 100 of 20,778 RNA–protein pairs in 11.7 ms