RNA–Protein interactions for RNA: ENST00000513139.1

SPCS3-204, Transcript of signal peptidase complex subunit 3, humanhuman

TSL 2

Gene SPCS3, Length 589 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPCS3-204ENST00000513139 MPHOSPH9Q99550 1183 aa20.77■□□□□ 0.92
SPCS3-204ENST00000513139 CRYBG1Q9Y4K1 1723 aa20.77■□□□□ 0.92
SPCS3-204ENST00000513139 PRAM1Q96QH2 718 aa20.76■□□□□ 0.91
SPCS3-204ENST00000513139 PMFBP1Q8TBY8 1022 aa20.75■□□□□ 0.91
SPCS3-204ENST00000513139 SPATA31A5Q5VU36 1347 aa20.75■□□□□ 0.91
SPCS3-204ENST00000513139 SPATA31A7Q8IWB4 1347 aa20.75■□□□□ 0.91
SPCS3-204ENST00000513139 CFAP70Q5T0N1 1121 aa20.74■□□□□ 0.91
SPCS3-204ENST00000513139 GPRASP1Q5JY77 1395 aa20.73■□□□□ 0.91
SPCS3-204ENST00000513139 SAFB2Q14151 953 aaKnown RBP eCLIP20.73■□□□□ 0.91
SPCS3-204ENST00000513139 NPM3O75607 178 aaKnown RBP20.72■□□□□ 0.91
SPCS3-204ENST00000513139 R3HDM1Q15032 1099 aaKnown RBP20.72■□□□□ 0.91
SPCS3-204ENST00000513139 POGKQ9P215 609 aa20.72■□□□□ 0.91
SPCS3-204ENST00000513139 EIF3AQ14152 1382 aaKnown RBP20.72■□□□□ 0.91
SPCS3-204ENST00000513139 FAM182BQ5T319 152 aa20.69■□□□□ 0.9
SPCS3-204ENST00000513139 ACIN1Q9UKV3 1341 aaKnown RBP20.69■□□□□ 0.9
SPCS3-204ENST00000513139 PARD3Q8TEW0 1356 aa20.68■□□□□ 0.9
SPCS3-204ENST00000513139 TULP4Q9NRJ4 1543 aa20.68■□□□□ 0.9
SPCS3-204ENST00000513139 FAM196AQ6ZSG2 479 aa20.67■□□□□ 0.9
SPCS3-204ENST00000513139 CAMKK2Q96RR4 588 aa20.67■□□□□ 0.9
SPCS3-204ENST00000513139 ADGRB1O14514 1584 aa20.67■□□□□ 0.9
SPCS3-204ENST00000513139 ITSN1Q15811 1721 aa20.67■□□□□ 0.9
SPCS3-204ENST00000513139 EZH2Q15910 746 aaKnown RBP20.66■□□□□ 0.9
SPCS3-204ENST00000513139 PRDM11Q9NQV5 511 aa20.66■□□□□ 0.9
SPCS3-204ENST00000513139 RREB1Q92766 1687 aa20.66■□□□□ 0.9
SPCS3-204ENST00000513139 SPATA31A1Q5TZJ5 1347 aa20.65■□□□□ 0.9
SPCS3-204ENST00000513139 PRR36Q9H6K5 1346 aa20.64■□□□□ 0.89
SPCS3-204ENST00000513139 PHRF1Q9P1Y6 1649 aaKnown RBP20.63■□□□□ 0.89
SPCS3-204ENST00000513139 WASLO00401 505 aaPredicted RBP20.62■□□□□ 0.89
SPCS3-204ENST00000513139 TRIM37O94972 964 aa20.62■□□□□ 0.89
SPCS3-204ENST00000513139 NGDNQ8NEJ9 315 aaKnown RBP20.62■□□□□ 0.89
SPCS3-204ENST00000513139 HIRIP3Q9BW71 556 aaPredicted RBP20.62■□□□□ 0.89
SPCS3-204ENST00000513139 NUP188Q5SRE5 1749 aa20.61■□□□□ 0.89
SPCS3-204ENST00000513139 MINK1Q8N4C8 1332 aaPredicted RBP20.6■□□□□ 0.89
SPCS3-204ENST00000513139 PAK3O75914 559 aaPredicted RBP20.6■□□□□ 0.89
SPCS3-204ENST00000513139 TRAK1Q9UPV9 953 aa20.6■□□□□ 0.89
SPCS3-204ENST00000513139 KIAA0232Q92628 1395 aa20.59■□□□□ 0.89
SPCS3-204ENST00000513139 APBA3O96018 575 aa20.59■□□□□ 0.89
SPCS3-204ENST00000513139 ATP7BP35670 1465 aa20.58■□□□□ 0.89
SPCS3-204ENST00000513139 BARGINQ6ZT62 677 aa20.57■□□□□ 0.88
SPCS3-204ENST00000513139 ARHGEF28Q8N1W1 1705 aaKnown RBP20.56■□□□□ 0.88
SPCS3-204ENST00000513139 YY1P25490 414 aa20.55■□□□□ 0.88
SPCS3-204ENST00000513139 CHRNA2Q15822 529 aa20.55■□□□□ 0.88
SPCS3-204ENST00000513139 NBPF8Q3BBV2 869 aa20.55■□□□□ 0.88
SPCS3-204ENST00000513139 NBPF14Q5TI25 921 aa20.55■□□□□ 0.88
SPCS3-204ENST00000513139 STRN4Q9NRL3 753 aa20.55■□□□□ 0.88
SPCS3-204ENST00000513139 PDE3BQ13370 1112 aa20.54■□□□□ 0.88
SPCS3-204ENST00000513139 STAC3Q96MF2 364 aa20.54■□□□□ 0.88
SPCS3-204ENST00000513139 SSH2Q76I76 1423 aa20.53■□□□□ 0.88
SPCS3-204ENST00000513139 ZC3H6P61129 1189 aaKnown RBP20.52■□□□□ 0.88
SPCS3-204ENST00000513139 NUDT16Q96DE0 195 aaKnown RBP20.52■□□□□ 0.88
SPCS3-204ENST00000513139 PARP4Q9UKK3 1724 aaKnown RBP20.52■□□□□ 0.88
SPCS3-204ENST00000513139 TOPAZ1Q8N9V7 1692 aa20.51■□□□□ 0.87
SPCS3-204ENST00000513139 LMO7Q8WWI1 1683 aa20.51■□□□□ 0.87
SPCS3-204ENST00000513139 EVA1CP58658 441 aa20.51■□□□□ 0.87
SPCS3-204ENST00000513139 RGPD3A6NKT7 1758 aaPredicted RBP20.51■□□□□ 0.87
SPCS3-204ENST00000513139 RGPD4Q7Z3J3 1758 aa20.51■□□□□ 0.87
SPCS3-204ENST00000513139 CAMTA1Q9Y6Y1 1673 aa20.51■□□□□ 0.87
SPCS3-204ENST00000513139 POLR3AO14802 1390 aaPredicted RBP20.5■□□□□ 0.87
SPCS3-204ENST00000513139 C11orf95C9JLR9 678 aaPredicted RBP20.5■□□□□ 0.87
SPCS3-204ENST00000513139 SPON1Q9HCB6 807 aa20.5■□□□□ 0.87
SPCS3-204ENST00000513139 USP35Q9P2H5 1018 aa20.5■□□□□ 0.87
SPCS3-204ENST00000513139 NRKQ7Z2Y5 1582 aa20.5■□□□□ 0.87
SPCS3-204ENST00000513139 TCP11L2Q8N4U5 519 aa20.49■□□□□ 0.87
SPCS3-204ENST00000513139 THRAP3Q9Y2W1 955 aaKnown RBP20.49■□□□□ 0.87
SPCS3-204ENST00000513139 SBF2Q86WG5 1849 aa20.48■□□□□ 0.87
SPCS3-204ENST00000513139 CPDO75976 1380 aa20.48■□□□□ 0.87
SPCS3-204ENST00000513139 NINLQ9Y2I6 1382 aa20.48■□□□□ 0.87
SPCS3-204ENST00000513139 DCAF8L1A6NGE4 600 aa20.47■□□□□ 0.87
SPCS3-204ENST00000513139 DCAF11Q8TEB1 546 aa20.47■□□□□ 0.87
SPCS3-204ENST00000513139 KCNQ2O43526 872 aa20.46■□□□□ 0.87
SPCS3-204ENST00000513139 LARP1Q6PKG0 1096 aaKnown RBP20.46■□□□□ 0.87
SPCS3-204ENST00000513139 PPP1R1BQ9UD71 204 aaPredicted RBP20.46■□□□□ 0.87
SPCS3-204ENST00000513139 KDM2AQ9Y2K7 1162 aa20.46■□□□□ 0.87
SPCS3-204ENST00000513139 NUTM2GQ5VZR2 741 aa20.45■□□□□ 0.86
SPCS3-204ENST00000513139 ACEP12821 1306 aa20.45■□□□□ 0.86
SPCS3-204ENST00000513139 PEAK1Q9H792 1746 aa20.44■□□□□ 0.86
SPCS3-204ENST00000513139 CDK19Q9BWU1 502 aa20.44■□□□□ 0.86
SPCS3-204ENST00000513139 RNF216Q9NWF9 866 aaPredicted RBP20.44■□□□□ 0.86
SPCS3-204ENST00000513139 CCDC61Q9Y6R9 512 aa20.44■□□□□ 0.86
SPCS3-204ENST00000513139 PLEKHG3A1L390 1219 aa20.43■□□□□ 0.86
SPCS3-204ENST00000513139 ABTB2Q8N961 1025 aa20.43■□□□□ 0.86
SPCS3-204ENST00000513139 USP19O94966 1318 aa20.43■□□□□ 0.86
SPCS3-204ENST00000513139 CASZ1Q86V15 1759 aa20.41■□□□□ 0.86
SPCS3-204ENST00000513139 OVOS2A0A0G2JMS6 1433 aa20.4■□□□□ 0.86
SPCS3-204ENST00000513139 OVOS2A0A0J9YW53 1432 aa20.4■□□□□ 0.86
SPCS3-204ENST00000513139 PLSCR1O15162 318 aa20.4■□□□□ 0.86
SPCS3-204ENST00000513139 COL5A2P05997 1499 aaPredicted RBP20.4■□□□□ 0.86
SPCS3-204ENST00000513139 OVOS2Q6IE36 1432 aa20.4■□□□□ 0.86
SPCS3-204ENST00000513139 KIAA1210Q9ULL0 1709 aa20.39■□□□□ 0.86
SPCS3-204ENST00000513139 CRB1P82279 1406 aa20.39■□□□□ 0.85
SPCS3-204ENST00000513139 NLRP13Q86W25 1043 aa20.39■□□□□ 0.85
SPCS3-204ENST00000513139 RAB3GAP2Q9H2M9 1393 aa20.38■□□□□ 0.85
SPCS3-204ENST00000513139 GCP02774 474 aa20.38■□□□□ 0.85
SPCS3-204ENST00000513139 BRD4O60885 1362 aaPredicted RBP20.37■□□□□ 0.85
SPCS3-204ENST00000513139 LRRC37A3O60309 1634 aa20.37■□□□□ 0.85
SPCS3-204ENST00000513139 WNK3Q9BYP7 1800 aa20.37■□□□□ 0.85
SPCS3-204ENST00000513139 AKAP12Q02952 1782 aa20.36■□□□□ 0.85
SPCS3-204ENST00000513139 UTRNP46939 3433 aa20.35■□□□□ 0.85
SPCS3-204ENST00000513139 CHD4Q14839 1912 aa20.35■□□□□ 0.85
SPCS3-204ENST00000513139 BCL11BQ9C0K0 894 aaPredicted RBP20.33■□□□□ 0.85
Retrieved 100 of 20,778 RNA–protein pairs in 49.5 ms