RNA–Protein interactions for RNA: ENST00000512979.1

TRIO-220, Transcript of trio Rho guanine nucleotide exchange factor, humanhuman

TSL 5

Gene TRIO, Length 292 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIO-220ENST00000512979 SMYD5Q6GMV2 418 aa14.1□□□□□ -0.15
TRIO-220ENST00000512979 PHLPP1O60346 1717 aa14.1□□□□□ -0.15
TRIO-220ENST00000512979 SIPA1L2Q9P2F8 1722 aaPredicted RBP14.1□□□□□ -0.15
TRIO-220ENST00000512979 JCADQ9P266 1359 aa14.09□□□□□ -0.15
TRIO-220ENST00000512979 CD44P16070 742 aaKnown RBP14.09□□□□□ -0.15
TRIO-220ENST00000512979 XRN1Q8IZH2 1706 aaKnown RBP14.09□□□□□ -0.15
TRIO-220ENST00000512979 TMEM106CQ9BVX2 250 aa14.08□□□□□ -0.16
TRIO-220ENST00000512979 KIF1BO60333 1816 aa14.08□□□□□ -0.16
TRIO-220ENST00000512979 ARIH1Q9Y4X5 557 aaPredicted RBP14.07□□□□□ -0.16
TRIO-220ENST00000512979 DCCP43146 1447 aa14.07□□□□□ -0.16
TRIO-220ENST00000512979 COL16A1Q07092 1604 aaPredicted RBP14.06□□□□□ -0.16
TRIO-220ENST00000512979 ZMYND10O75800 440 aa14.06□□□□□ -0.16
TRIO-220ENST00000512979 BRINP3Q76B58 766 aa14.06□□□□□ -0.16
TRIO-220ENST00000512979 RPGRIP1LQ68CZ1 1315 aa14.06□□□□□ -0.16
TRIO-220ENST00000512979 AHDC1Q5TGY3 1603 aaPredicted RBP14.04□□□□□ -0.16
TRIO-220ENST00000512979 CAMK2BQ13554 666 aa14.04□□□□□ -0.16
TRIO-220ENST00000512979 POTEAQ6S8J7 498 aa14.04□□□□□ -0.16
TRIO-220ENST00000512979 ADGRL3Q9HAR2 1447 aa14.04□□□□□ -0.16
TRIO-220ENST00000512979 MST1RQ04912 1400 aa14.03□□□□□ -0.16
TRIO-220ENST00000512979 CCDC144AA2RUR9 1427 aa14.02□□□□□ -0.16
TRIO-220ENST00000512979 SPATA31A6Q5VVP1 1343 aa14.02□□□□□ -0.17
TRIO-220ENST00000512979 MKRN3Q13064 507 aaKnown RBP14.02□□□□□ -0.17
TRIO-220ENST00000512979 MPHOSPH9Q99550 1183 aa14.02□□□□□ -0.17
TRIO-220ENST00000512979 TRPC6Q9Y210 931 aa14.02□□□□□ -0.17
TRIO-220ENST00000512979 ASXL1Q8IXJ9 1541 aa14.01□□□□□ -0.17
TRIO-220ENST00000512979 PTCH1Q13635 1447 aa14.01□□□□□ -0.17
TRIO-220ENST00000512979 MEX3CQ5U5Q3 659 aaKnown RBP14.01□□□□□ -0.17
TRIO-220ENST00000512979 ROBO2Q9HCK4 1378 aa14□□□□□ -0.17
TRIO-220ENST00000512979 LRP6O75581 1613 aa14□□□□□ -0.17
TRIO-220ENST00000512979 RGL3Q3MIN7 710 aa13.99□□□□□ -0.17
TRIO-220ENST00000512979 PPLO60437 1756 aa13.99□□□□□ -0.17
TRIO-220ENST00000512979 SETD1AO15047 1707 aaKnown RBP13.98□□□□□ -0.17
TRIO-220ENST00000512979 ADGRF5Q8IZF2 1346 aa13.98□□□□□ -0.17
TRIO-220ENST00000512979 NALCNQ8IZF0 1738 aa13.98□□□□□ -0.17
TRIO-220ENST00000512979 BARGINQ6ZT62 677 aa13.97□□□□□ -0.17
TRIO-220ENST00000512979 DDX17Q92841 729 aaKnown RBP13.97□□□□□ -0.17
TRIO-220ENST00000512979 MS4A3Q96HJ5 214 aa13.97□□□□□ -0.17
TRIO-220ENST00000512979 SHPRHQ149N8 1683 aa13.97□□□□□ -0.17
TRIO-220ENST00000512979 SPATA31E1Q6ZUB1 1445 aa13.97□□□□□ -0.17
TRIO-220ENST00000512979 PRAG1Q86YV5 1406 aa13.97□□□□□ -0.17
TRIO-220ENST00000512979 SETD5Q9C0A6 1442 aa13.97□□□□□ -0.17
TRIO-220ENST00000512979 C1orf167Q5SNV9 1468 aa13.96□□□□□ -0.17
TRIO-220ENST00000512979 NUTM2BA6NNL0 878 aaPredicted RBP13.96□□□□□ -0.17
TRIO-220ENST00000512979 NUTM2EB1AL46 878 aaPredicted RBP13.96□□□□□ -0.17
TRIO-220ENST00000512979 NUTM2AQ8IVF1 878 aaPredicted RBP13.96□□□□□ -0.17
TRIO-220ENST00000512979 ANKRD30BQ9BXX2 1392 aa13.96□□□□□ -0.18
TRIO-220ENST00000512979 ACIN1Q9UKV3 1341 aaKnown RBP13.95□□□□□ -0.18
TRIO-220ENST00000512979 LRRC59Q96AG4 307 aaKnown RBP13.95□□□□□ -0.18
TRIO-220ENST00000512979 NHSL1Q5SYE7 1610 aa13.94□□□□□ -0.18
TRIO-220ENST00000512979 MLLT3P42568 568 aaPredicted RBP13.94□□□□□ -0.18
TRIO-220ENST00000512979 RBM26Q5T8P6 1007 aaKnown RBP13.94□□□□□ -0.18
TRIO-220ENST00000512979 ZNF772Q68DY9 489 aaPredicted RBP13.94□□□□□ -0.18
TRIO-220ENST00000512979 PPP1R15BQ5SWA1 713 aa13.93□□□□□ -0.18
TRIO-220ENST00000512979 ARXQ96QS3 562 aa13.93□□□□□ -0.18
TRIO-220ENST00000512979 ORAI2Q96SN7 254 aa13.93□□□□□ -0.18
TRIO-220ENST00000512979 STK26Q9P289 416 aa13.93□□□□□ -0.18
TRIO-220ENST00000512979 PNPLA6Q8IY17 1366 aa13.92□□□□□ -0.18
TRIO-220ENST00000512979 TMEM132EQ6IEE7 984 aa13.91□□□□□ -0.18
TRIO-220ENST00000512979 GPHNQ9NQX3 736 aaPredicted RBP13.91□□□□□ -0.18
TRIO-220ENST00000512979 LRPPRCP42704 1394 aaKnown RBP13.91□□□□□ -0.18
TRIO-220ENST00000512979 RAB3GAP2Q9H2M9 1393 aa13.91□□□□□ -0.18
TRIO-220ENST00000512979 PIK3C2GO75747 1445 aa13.9□□□□□ -0.18
TRIO-220ENST00000512979 WAPLQ7Z5K2 1190 aa13.9□□□□□ -0.18
TRIO-220ENST00000512979 GPIHBP1Q8IV16 184 aa13.89□□□□□ -0.19
TRIO-220ENST00000512979 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP13.89□□□□□ -0.19
TRIO-220ENST00000512979 IFT172Q9UG01 1749 aa13.89□□□□□ -0.19
TRIO-220ENST00000512979 TECPR2O15040 1411 aa13.89□□□□□ -0.19
TRIO-220ENST00000512979 AFF2P51816 1311 aa13.89□□□□□ -0.19
TRIO-220ENST00000512979 SOS2Q07890 1332 aaPredicted RBP13.89□□□□□ -0.19
TRIO-220ENST00000512979 ABCC11Q96J66 1382 aa13.88□□□□□ -0.19
TRIO-220ENST00000512979 ESCO1Q5FWF5 840 aa13.88□□□□□ -0.19
TRIO-220ENST00000512979 C8orf37Q96NL8 207 aa13.88□□□□□ -0.19
TRIO-220ENST00000512979 CDC42BPGQ6DT37 1551 aa13.88□□□□□ -0.19
TRIO-220ENST00000512979 PLEKHH1Q9ULM0 1364 aa13.87□□□□□ -0.19
TRIO-220ENST00000512979 RXRBP28702 533 aa13.87□□□□□ -0.19
TRIO-220ENST00000512979 AK7Q96M32 723 aa13.87□□□□□ -0.19
TRIO-220ENST00000512979 YTHDC2Q9H6S0 1430 aaKnown RBP13.87□□□□□ -0.19
TRIO-220ENST00000512979 LAMC1P11047 1609 aa13.86□□□□□ -0.19
TRIO-220ENST00000512979 NUTM2FA1L443 756 aa13.86□□□□□ -0.19
TRIO-220ENST00000512979 TTLL13PA6NNM8 815 aa13.86□□□□□ -0.19
TRIO-220ENST00000512979 ADAMTS2O95450 1211 aa13.86□□□□□ -0.19
TRIO-220ENST00000512979 TIE1P35590 1138 aa13.86□□□□□ -0.19
TRIO-220ENST00000512979 C14orf93Q9H972 538 aaKnown RBP13.86□□□□□ -0.19
TRIO-220ENST00000512979 CFAP70Q5T0N1 1121 aa13.85□□□□□ -0.19
TRIO-220ENST00000512979 KRI1Q8N9T8 703 aaKnown RBP13.85□□□□□ -0.19
TRIO-220ENST00000512979 MYOM2P54296 1465 aa13.85□□□□□ -0.19
TRIO-220ENST00000512979 NPHP3Q7Z494 1330 aa13.85□□□□□ -0.19
TRIO-220ENST00000512979 DPYSL4O14531 572 aa13.84□□□□□ -0.19
TRIO-220ENST00000512979 EMILIN3Q9NT22 766 aa13.84□□□□□ -0.19
TRIO-220ENST00000512979 NRXN1Q9ULB1 1477 aa13.84□□□□□ -0.19
TRIO-220ENST00000512979 KNDC1Q76NI1 1749 aa13.84□□□□□ -0.19
TRIO-220ENST00000512979 FOXO3O43524 673 aa13.83□□□□□ -0.2
TRIO-220ENST00000512979 XPCQ01831 940 aaPredicted RBP13.83□□□□□ -0.2
TRIO-220ENST00000512979 NGLY1Q96IV0 654 aa13.83□□□□□ -0.2
TRIO-220ENST00000512979 DHX57Q6P158 1386 aaKnown RBP13.83□□□□□ -0.2
TRIO-220ENST00000512979 SIRT1Q96EB6 747 aa13.82□□□□□ -0.2
TRIO-220ENST00000512979 QTRT2Q9H974 415 aaKnown RBP13.82□□□□□ -0.2
TRIO-220ENST00000512979 GPBP1L1Q9HC44 474 aaPredicted RBP13.82□□□□□ -0.2
TRIO-220ENST00000512979 DSG2Q14126 1118 aa13.81□□□□□ -0.2
TRIO-220ENST00000512979 PXDNQ92626 1479 aa13.8□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms