RNA–Protein interactions for RNA: ENST00000512881.5

RFC1-215, Transcript of replication factor C subunit 1, humanhuman

TSL 3

Gene RFC1, Length 537 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC1-215ENST00000512881 TRAPPC8Q9Y2L5 1435 aa10.98□□□□□ -0.65
RFC1-215ENST00000512881 MADDQ8WXG6 1647 aa10.98□□□□□ -0.65
RFC1-215ENST00000512881 LOC105371045A0A1W2PR82 267 aa10.97□□□□□ -0.65
RFC1-215ENST00000512881 HNRNPMP52272 730 aaKnown RBP eCLIP10.97□□□□□ -0.65
RFC1-215ENST00000512881 ZNF516Q92618 1163 aa10.97□□□□□ -0.65
RFC1-215ENST00000512881 CFDP1Q9UEE9 299 aaPredicted RBP10.97□□□□□ -0.65
RFC1-215ENST00000512881 ARHGEF12Q9NZN5 1544 aa10.97□□□□□ -0.65
RFC1-215ENST00000512881 MYO5CQ9NQX4 1742 aa10.96□□□□□ -0.65
RFC1-215ENST00000512881 SLC10A3P09131 477 aa10.96□□□□□ -0.65
RFC1-215ENST00000512881 CEBPAP49715 358 aaPredicted RBP10.96□□□□□ -0.65
RFC1-215ENST00000512881 COPS2P61201 443 aa10.96□□□□□ -0.65
RFC1-215ENST00000512881 PRR14Q9BWN1 585 aa10.96□□□□□ -0.65
RFC1-215ENST00000512881 LRRIQ1Q96JM4 1722 aa10.95□□□□□ -0.66
RFC1-215ENST00000512881 GPATCH8Q9UKJ3 1502 aaKnown RBP10.95□□□□□ -0.66
RFC1-215ENST00000512881 MLH3Q9UHC1 1453 aa10.95□□□□□ -0.66
RFC1-215ENST00000512881 MTUS2Q5JR59 1369 aa10.95□□□□□ -0.66
RFC1-215ENST00000512881 CFHP08603 1231 aa10.95□□□□□ -0.66
RFC1-215ENST00000512881 HSPA2P54652 639 aa10.95□□□□□ -0.66
RFC1-215ENST00000512881 PHOX2BQ99453 314 aa10.95□□□□□ -0.66
RFC1-215ENST00000512881 CEP162Q5TB80 1403 aa10.94□□□□□ -0.66
RFC1-215ENST00000512881 CCNB3Q8WWL7 1395 aa10.94□□□□□ -0.66
RFC1-215ENST00000512881 NLRP7Q8WX94 980 aa10.94□□□□□ -0.66
RFC1-215ENST00000512881 KDM5CP41229 1560 aa10.94□□□□□ -0.66
RFC1-215ENST00000512881 SPAG9O60271 1321 aaKnown RBP10.93□□□□□ -0.66
RFC1-215ENST00000512881 TULP1O00294 542 aaPredicted RBP10.93□□□□□ -0.66
RFC1-215ENST00000512881 PCDHB3Q9Y5E6 796 aa10.93□□□□□ -0.66
RFC1-215ENST00000512881 LMTK3Q96Q04 1460 aa10.93□□□□□ -0.66
RFC1-215ENST00000512881 SIGLEC1Q9BZZ2 1709 aa10.92□□□□□ -0.66
RFC1-215ENST00000512881 ACTN4O43707 911 aaKnown RBP10.92□□□□□ -0.66
RFC1-215ENST00000512881 BLOC1S3Q6QNY0 202 aa10.92□□□□□ -0.66
RFC1-215ENST00000512881 ESF1Q9H501 851 aaKnown RBP10.92□□□□□ -0.66
RFC1-215ENST00000512881 ABCC1P33527 1531 aa10.92□□□□□ -0.66
RFC1-215ENST00000512881 RIMS1Q86UR5 1692 aaKnown RBP10.92□□□□□ -0.66
RFC1-215ENST00000512881 ZNF644Q9H582 1327 aaPredicted RBP10.91□□□□□ -0.66
RFC1-215ENST00000512881 KMT5BQ4FZB7 885 aa10.91□□□□□ -0.66
RFC1-215ENST00000512881 NKX2-3Q8TAU0 364 aa10.91□□□□□ -0.66
RFC1-215ENST00000512881 CDC42BPBQ9Y5S2 1711 aa10.91□□□□□ -0.66
RFC1-215ENST00000512881 KIAA1107Q9UPP5 1409 aa10.91□□□□□ -0.66
RFC1-215ENST00000512881 PREX2Q70Z35 1606 aa10.91□□□□□ -0.66
RFC1-215ENST00000512881 ZPR1O75312 459 aa10.9□□□□□ -0.66
RFC1-215ENST00000512881 MAP2K5Q13163 448 aa10.9□□□□□ -0.66
RFC1-215ENST00000512881 DIP2CQ9Y2E4 1556 aa10.89□□□□□ -0.67
RFC1-215ENST00000512881 PLEKHH2Q8IVE3 1493 aa10.88□□□□□ -0.67
RFC1-215ENST00000512881 PPP1R18Q6NYC8 613 aa10.88□□□□□ -0.67
RFC1-215ENST00000512881 DAXXQ9UER7 740 aaPredicted RBP10.88□□□□□ -0.67
RFC1-215ENST00000512881 REREQ9P2R6 1566 aa10.87□□□□□ -0.67
RFC1-215ENST00000512881 TLL1O43897 1013 aa10.87□□□□□ -0.67
RFC1-215ENST00000512881 DHX30Q7L2E3 1194 aaKnown RBP eCLIP10.87□□□□□ -0.67
RFC1-215ENST00000512881 AGLP35573 1532 aa10.87□□□□□ -0.67
RFC1-215ENST00000512881 SAMD9LQ8IVG5 1584 aa10.86□□□□□ -0.67
RFC1-215ENST00000512881 SYCP2Q9BX26 1530 aa10.86□□□□□ -0.67
RFC1-215ENST00000512881 FBXO41Q8TF61 875 aa10.86□□□□□ -0.67
RFC1-215ENST00000512881 ABCA6Q8N139 1617 aa10.86□□□□□ -0.67
RFC1-215ENST00000512881 CDC42BPAQ5VT25 1732 aa10.86□□□□□ -0.67
RFC1-215ENST00000512881 ITSN2Q9NZM3 1697 aa10.85□□□□□ -0.67
RFC1-215ENST00000512881 RSPH4AQ5TD94 716 aa10.84□□□□□ -0.67
RFC1-215ENST00000512881 GGT6Q6P531 493 aa10.84□□□□□ -0.67
RFC1-215ENST00000512881 LMOD2Q6P5Q4 547 aa10.84□□□□□ -0.67
RFC1-215ENST00000512881 EIF4ENIF1Q9NRA8 985 aaKnown RBP10.84□□□□□ -0.67
RFC1-215ENST00000512881 MBD5Q9P267 1494 aa10.84□□□□□ -0.67
RFC1-215ENST00000512881 EHBP1L1Q8N3D4 1523 aa10.84□□□□□ -0.67
RFC1-215ENST00000512881 CNTLNQ9NXG0 1405 aa10.84□□□□□ -0.67
RFC1-215ENST00000512881 FER1L4A9Z1Z3 1794 aa10.83□□□□□ -0.68
RFC1-215ENST00000512881 KIDINS220Q9ULH0 1771 aa10.83□□□□□ -0.68
RFC1-215ENST00000512881 ZMYM3Q14202 1370 aa10.83□□□□□ -0.68
RFC1-215ENST00000512881 DDX11L8A8MPP1 907 aa10.83□□□□□ -0.68
RFC1-215ENST00000512881 IRF6O14896 467 aa10.83□□□□□ -0.68
RFC1-215ENST00000512881 RDH13Q8NBN7 331 aa10.83□□□□□ -0.68
RFC1-215ENST00000512881 UHRF1BP1Q6BDS2 1440 aa10.83□□□□□ -0.68
RFC1-215ENST00000512881 VPS8Q8N3P4 1428 aa10.83□□□□□ -0.68
RFC1-215ENST00000512881 A2MP01023 1474 aa10.82□□□□□ -0.68
RFC1-215ENST00000512881 NCOA2Q15596 1464 aa10.82□□□□□ -0.68
RFC1-215ENST00000512881 KANK4Q5T7N3 995 aaPredicted RBP10.82□□□□□ -0.68
RFC1-215ENST00000512881 CCDC102AQ96A19 550 aa10.82□□□□□ -0.68
RFC1-215ENST00000512881 ATP7AQ04656 1500 aa10.81□□□□□ -0.68
RFC1-215ENST00000512881 IRX2Q9BZI1 471 aaPredicted RBP10.81□□□□□ -0.68
RFC1-215ENST00000512881 RTEL1-TNFRSF6BF6WH68 1400 aa10.81□□□□□ -0.68
RFC1-215ENST00000512881 TIAM1Q13009 1591 aa10.81□□□□□ -0.68
RFC1-215ENST00000512881 MINK1Q8N4C8 1332 aaPredicted RBP10.81□□□□□ -0.68
RFC1-215ENST00000512881 DHX29Q7Z478 1369 aaKnown RBP10.8□□□□□ -0.68
RFC1-215ENST00000512881 TSPY4P0CV99 314 aa10.8□□□□□ -0.68
RFC1-215ENST00000512881 TSPY10P0CW01 314 aa10.8□□□□□ -0.68
RFC1-215ENST00000512881 PUS10Q3MIT2 529 aaKnown RBP10.8□□□□□ -0.68
RFC1-215ENST00000512881 SULF1Q8IWU6 871 aa10.8□□□□□ -0.68
RFC1-215ENST00000512881 KIF3BO15066 747 aa10.79□□□□□ -0.68
RFC1-215ENST00000512881 LRRC9Q6ZRR7 1453 aa10.79□□□□□ -0.68
RFC1-215ENST00000512881 NR1I2O75469 434 aa10.78□□□□□ -0.68
RFC1-215ENST00000512881 FUT2Q10981 343 aa10.78□□□□□ -0.68
RFC1-215ENST00000512881 PRKD2Q9BZL6 878 aa10.78□□□□□ -0.68
RFC1-215ENST00000512881 NPATQ14207 1427 aa10.77□□□□□ -0.68
RFC1-215ENST00000512881 ADH1BP00325 375 aa10.77□□□□□ -0.69
RFC1-215ENST00000512881 GGCXP38435 758 aa10.77□□□□□ -0.69
RFC1-215ENST00000512881 GCGRP47871 477 aa10.77□□□□□ -0.69
RFC1-215ENST00000512881 TMUB1Q9BVT8 246 aa10.77□□□□□ -0.69
RFC1-215ENST00000512881 INO80Q9ULG1 1556 aaPredicted RBP10.77□□□□□ -0.69
RFC1-215ENST00000512881 CAMSAP2Q08AD1 1489 aa10.76□□□□□ -0.69
RFC1-215ENST00000512881 CCDC141Q6ZP82 1450 aa10.76□□□□□ -0.69
RFC1-215ENST00000512881 MORN1Q5T089 497 aa10.76□□□□□ -0.69
RFC1-215ENST00000512881 PLXNC1O60486 1568 aa10.76□□□□□ -0.69
RFC1-215ENST00000512881 SETD1BQ9UPS6 1966 aaKnown RBP10.76□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 91 ms