RNA–Protein interactions for RNA: ENST00000512844.5

CHD1-209, Transcript of chromodomain helicase DNA binding protein 1, humanhuman

TSL 5

Gene CHD1, Length 848 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1-209ENST00000512844 LIAT1Q6ZQX7 453 aa11.12□□□□□ -0.63
CHD1-209ENST00000512844 GPKOWQ92917 476 aaPredicted RBP eCLIP11.12□□□□□ -0.63
CHD1-209ENST00000512844 FKBPLQ9UIM3 349 aa11.12□□□□□ -0.63
CHD1-209ENST00000512844 ZC3H4Q9UPT8 1303 aaKnown RBP11.11□□□□□ -0.63
CHD1-209ENST00000512844 LINC01559Q495D7 138 aa11.11□□□□□ -0.63
CHD1-209ENST00000512844 WWC1Q8IX03 1113 aa11.11□□□□□ -0.63
CHD1-209ENST00000512844 WNT7BP56706 349 aa11.1□□□□□ -0.63
CHD1-209ENST00000512844 SPRYD7Q5W111 196 aa11.1□□□□□ -0.63
CHD1-209ENST00000512844 BAP1Q92560 729 aa11.1□□□□□ -0.63
CHD1-209ENST00000512844 ZNF697Q5TEC3 545 aa11.09□□□□□ -0.63
CHD1-209ENST00000512844 ZNF598Q86UK7 904 aaKnown RBP11.08□□□□□ -0.64
CHD1-209ENST00000512844 ZNF511Q8NB15 262 aa11.08□□□□□ -0.64
CHD1-209ENST00000512844 BPHLQ86WA6 291 aaPredicted RBP11.07□□□□□ -0.64
CHD1-209ENST00000512844 EPS8L1Q8TE68 723 aa11.07□□□□□ -0.64
CHD1-209ENST00000512844 GJD4Q96KN9 370 aaPredicted RBP11.07□□□□□ -0.64
CHD1-209ENST00000512844 TRIM34Q9BYJ4 488 aa11.07□□□□□ -0.64
CHD1-209ENST00000512844 PTK2Q05397 1052 aa11.06□□□□□ -0.64
CHD1-209ENST00000512844 EHBP1Q8NDI1 1231 aa11.06□□□□□ -0.64
CHD1-209ENST00000512844 ABL2P42684 1182 aa11.05□□□□□ -0.64
CHD1-209ENST00000512844 SH3BP2P78314 561 aa11.04□□□□□ -0.64
CHD1-209ENST00000512844 FOXC1Q12948 553 aa11.04□□□□□ -0.64
CHD1-209ENST00000512844 PDXDC2PQ6P474 469 aa11.04□□□□□ -0.64
CHD1-209ENST00000512844 ARHGAP9Q9BRR9 750 aa11.04□□□□□ -0.64
CHD1-209ENST00000512844 MAGEB6P1A0A0J9YX57 407 aa11.03□□□□□ -0.64
CHD1-209ENST00000512844 ZBTB33Q86T24 672 aa11.03□□□□□ -0.64
CHD1-209ENST00000512844 EMID1Q96A84 441 aaPredicted RBP11.03□□□□□ -0.64
CHD1-209ENST00000512844 GDPD2Q9HCC8 539 aa11.03□□□□□ -0.64
CHD1-209ENST00000512844 TBC1D2BQ9UPU7 963 aa11.03□□□□□ -0.64
CHD1-209ENST00000512844 ZNF330Q9Y3S2 320 aaPredicted RBP11.03□□□□□ -0.64
CHD1-209ENST00000512844 RC3H1Q5TC82 1133 aaKnown RBP11.02□□□□□ -0.65
CHD1-209ENST00000512844 ERICH6Q7L0X2 663 aa11.02□□□□□ -0.65
CHD1-209ENST00000512844 CARD14Q9BXL6 1004 aa11.02□□□□□ -0.65
CHD1-209ENST00000512844 GPSM3Q9Y4H4 160 aa11.02□□□□□ -0.65
CHD1-209ENST00000512844 FAM174AQ8TBP5 190 aa11.01□□□□□ -0.65
CHD1-209ENST00000512844 WNT7AO00755 349 aa11□□□□□ -0.65
CHD1-209ENST00000512844 VARSP26640 1264 aaKnown RBP11□□□□□ -0.65
CHD1-209ENST00000512844 ZNF592Q92610 1267 aa11□□□□□ -0.65
CHD1-209ENST00000512844 FOXJ1Q92949 421 aa11□□□□□ -0.65
CHD1-209ENST00000512844 ZBBXA8MT70 800 aa10.99□□□□□ -0.65
CHD1-209ENST00000512844 SKOR1P84550 965 aa10.99□□□□□ -0.65
CHD1-209ENST00000512844 COG6Q9Y2V7 657 aa10.99□□□□□ -0.65
CHD1-209ENST00000512844 C14orf37Q86TY3 774 aa10.98□□□□□ -0.65
CHD1-209ENST00000512844 WASHC4Q2M389 1173 aa10.97□□□□□ -0.65
CHD1-209ENST00000512844 SH3BP5LQ7L8J4 393 aa10.97□□□□□ -0.65
CHD1-209ENST00000512844 CYP4X1Q8N118 509 aa10.97□□□□□ -0.65
CHD1-209ENST00000512844 SLC10A4Q96EP9 437 aa10.97□□□□□ -0.65
CHD1-209ENST00000512844 TTC24A2A3L6 582 aaPredicted RBP10.96□□□□□ -0.65
CHD1-209ENST00000512844 TNFRSF10AO00220 468 aa10.96□□□□□ -0.65
CHD1-209ENST00000512844 NR1H3Q13133 447 aa10.96□□□□□ -0.65
CHD1-209ENST00000512844 MRGPRX2Q96LB1 330 aa10.96□□□□□ -0.65
CHD1-209ENST00000512844 PDZRN3Q9UPQ7 1066 aa10.96□□□□□ -0.65
CHD1-209ENST00000512844 POM121Q96HA1 1249 aa10.95□□□□□ -0.66
CHD1-209ENST00000512844 ARID5BQ14865 1188 aa10.94□□□□□ -0.66
CHD1-209ENST00000512844 DZIP3Q86Y13 1208 aaKnown RBP10.94□□□□□ -0.66
CHD1-209ENST00000512844 ADAM32Q8TC27 787 aa10.94□□□□□ -0.66
CHD1-209ENST00000512844 CLUAP1Q96AJ1 413 aa10.94□□□□□ -0.66
CHD1-209ENST00000512844 FBXO45P0C2W1 286 aa10.93□□□□□ -0.66
CHD1-209ENST00000512844 EIF4G2P78344 907 aaKnown RBP eCLIP10.93□□□□□ -0.66
CHD1-209ENST00000512844 SH3RF1Q7Z6J0 888 aa10.93□□□□□ -0.66
CHD1-209ENST00000512844 PROSER2Q86WR7 435 aaPredicted RBP10.93□□□□□ -0.66
CHD1-209ENST00000512844 CDV3Q9UKY7 258 aaKnown RBP10.93□□□□□ -0.66
CHD1-209ENST00000512844 PCDHB9Q9Y5E1 797 aa10.93□□□□□ -0.66
CHD1-209ENST00000512844 PRR20EP86478 221 aa10.92□□□□□ -0.66
CHD1-209ENST00000512844 PRR20CP86479 221 aa10.92□□□□□ -0.66
CHD1-209ENST00000512844 PRR20DP86480 221 aa10.92□□□□□ -0.66
CHD1-209ENST00000512844 PRR20BP86481 221 aa10.92□□□□□ -0.66
CHD1-209ENST00000512844 PRR20AP86496 221 aa10.92□□□□□ -0.66
CHD1-209ENST00000512844 SNIP1Q8TAD8 396 aaKnown RBP10.92□□□□□ -0.66
CHD1-209ENST00000512844 PKD2L1Q9P0L9 805 aa10.92□□□□□ -0.66
CHD1-209ENST00000512844 GDF9O60383 454 aa10.91□□□□□ -0.66
CHD1-209ENST00000512844 MCCD1P59942 119 aaPredicted RBP10.91□□□□□ -0.66
CHD1-209ENST00000512844 LAPTM4AQ15012 233 aa10.91□□□□□ -0.66
CHD1-209ENST00000512844 ERFEQ4G0M1 354 aa10.91□□□□□ -0.66
CHD1-209ENST00000512844 WASF2Q9Y6W5 498 aa10.91□□□□□ -0.66
CHD1-209ENST00000512844 A6NJR5 290 aa10.9□□□□□ -0.66
CHD1-209ENST00000512844 GFRA3O60609 400 aa10.9□□□□□ -0.66
CHD1-209ENST00000512844 ALDH1A1P00352 501 aa10.9□□□□□ -0.66
CHD1-209ENST00000512844 NBPF20Q3BBV1 942 aa10.9□□□□□ -0.66
CHD1-209ENST00000512844 C4orf48Q5BLP8 95 aa10.9□□□□□ -0.66
CHD1-209ENST00000512844 VASH1Q7L8A9 365 aaPredicted RBP10.9□□□□□ -0.66
CHD1-209ENST00000512844 IRX2Q9BZI1 471 aaPredicted RBP10.9□□□□□ -0.66
CHD1-209ENST00000512844 VAC14Q08AM6 782 aa10.89□□□□□ -0.67
CHD1-209ENST00000512844 TRMT44Q8IYL2 757 aaKnown RBP10.89□□□□□ -0.67
CHD1-209ENST00000512844 C1QTNF2Q9BXJ5 285 aa10.89□□□□□ -0.67
CHD1-209ENST00000512844 TLL2Q9Y6L7 1015 aa10.89□□□□□ -0.67
CHD1-209ENST00000512844 IRF5Q13568 498 aa10.88□□□□□ -0.67
CHD1-209ENST00000512844 GPR37L1O60883 481 aa10.87□□□□□ -0.67
CHD1-209ENST00000512844 SOX11P35716 441 aa10.87□□□□□ -0.67
CHD1-209ENST00000512844 SEMA3FQ13275 785 aa10.87□□□□□ -0.67
CHD1-209ENST00000512844 ZMYND15Q9H091 742 aa10.87□□□□□ -0.67
CHD1-209ENST00000512844 MPNDQ8N594 471 aa10.86□□□□□ -0.67
CHD1-209ENST00000512844 MAP4K5Q9Y4K4 846 aa10.86□□□□□ -0.67
CHD1-209ENST00000512844 FAM187AA6NFU0 413 aa10.85□□□□□ -0.67
CHD1-209ENST00000512844 NRG2O14511 850 aaPredicted RBP10.85□□□□□ -0.67
CHD1-209ENST00000512844 SIAH2O43255 324 aa10.85□□□□□ -0.67
CHD1-209ENST00000512844 TRIM67Q6ZTA4 783 aa10.85□□□□□ -0.67
CHD1-209ENST00000512844 TRIM52Q96A61 297 aa10.85□□□□□ -0.67
CHD1-209ENST00000512844 ADH1CP00326 375 aa10.84□□□□□ -0.67
CHD1-209ENST00000512844 PKDCCQ504Y2 493 aa10.84□□□□□ -0.67
CHD1-209ENST00000512844 OCSTAMPQ9BR26 566 aa10.84□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms