RNA–Protein interactions for RNA: ENST00000512756.5

COL11A1-210, Transcript of collagen type XI alpha 1 chain, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene COL11A1, Length 5,442 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL11A1-210ENST00000512756 BCAR3O75815 825 aa14.95□□□□□ -0.02
COL11A1-210ENST00000512756 FAM69CQ0P6D2 419 aa14.95□□□□□ -0.02
COL11A1-210ENST00000512756 PLEKHO1Q53GL0 409 aaPredicted RBP14.95□□□□□ -0.02
COL11A1-210ENST00000512756 RNF214Q8ND24 703 aa14.95□□□□□ -0.02
COL11A1-210ENST00000512756 SYTL4Q96C24 671 aaPredicted RBP14.95□□□□□ -0.02
COL11A1-210ENST00000512756 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP14.95□□□□□ -0.02
COL11A1-210ENST00000512756 R3HCC1Q9Y3T6 440 aaKnown RBP14.95□□□□□ -0.02
COL11A1-210ENST00000512756 KINO60870 393 aaKnown RBP14.95□□□□□ -0.02
COL11A1-210ENST00000512756 ATF7IPQ6VMQ6 1270 aa14.95□□□□□ -0.02
COL11A1-210ENST00000512756 SART3Q15020 963 aaKnown RBP14.95□□□□□ -0.02
COL11A1-210ENST00000512756 ZNF428Q96B54 188 aa14.95□□□□□ -0.02
COL11A1-210ENST00000512756 PRPF40AO75400 957 aaKnown RBP14.94□□□□□ -0.02
COL11A1-210ENST00000512756 CDR1P51861 262 aa14.94□□□□□ -0.02
COL11A1-210ENST00000512756 FOSBP53539 338 aa14.94□□□□□ -0.02
COL11A1-210ENST00000512756 ZNF692Q9BU19 519 aaPredicted RBP14.94□□□□□ -0.02
COL11A1-210ENST00000512756 CTDP1Q9Y5B0 961 aaPredicted RBP14.94□□□□□ -0.02
COL11A1-210ENST00000512756 ATF3P18847 181 aa14.94□□□□□ -0.02
COL11A1-210ENST00000512756 MVPQ14764 893 aaKnown RBP14.94□□□□□ -0.02
COL11A1-210ENST00000512756 GPRASP1Q5JY77 1395 aa14.94□□□□□ -0.02
COL11A1-210ENST00000512756 ERBINQ96RT1 1412 aa14.94□□□□□ -0.02
COL11A1-210ENST00000512756 RAD21O60216 631 aa14.94□□□□□ -0.02
COL11A1-210ENST00000512756 FBXW7Q969H0 707 aa14.94□□□□□ -0.02
COL11A1-210ENST00000512756 TRIM5Q9C035 493 aa14.94□□□□□ -0.02
COL11A1-210ENST00000512756 TBC1D2BQ9UPU7 963 aa14.94□□□□□ -0.02
COL11A1-210ENST00000512756 SYNJ1O43426 1573 aa14.94□□□□□ -0.02
COL11A1-210ENST00000512756 HMGN5P82970 282 aaKnown RBP14.93□□□□□ -0.02
COL11A1-210ENST00000512756 SLC12A5Q9H2X9 1139 aa14.93□□□□□ -0.02
COL11A1-210ENST00000512756 TROQ12816 1431 aaPredicted RBP14.93□□□□□ -0.02
COL11A1-210ENST00000512756 HSP90B2PQ58FF3 399 aa14.93□□□□□ -0.02
COL11A1-210ENST00000512756 AK7Q96M32 723 aa14.93□□□□□ -0.02
COL11A1-210ENST00000512756 ZNF396Q96N95 335 aaPredicted RBP14.93□□□□□ -0.02
COL11A1-210ENST00000512756 PRAM1Q96QH2 718 aa14.93□□□□□ -0.02
COL11A1-210ENST00000512756 RUFY1Q96T51 708 aa14.93□□□□□ -0.02
COL11A1-210ENST00000512756 DHX8Q14562 1220 aaKnown RBP14.92□□□□□ -0.02
COL11A1-210ENST00000512756 TSR2Q969E8 191 aaKnown RBP14.92□□□□□ -0.02
COL11A1-210ENST00000512756 PRM3Q9NNZ6 103 aa14.92□□□□□ -0.02
COL11A1-210ENST00000512756 TIAM1Q13009 1591 aa14.92□□□□□ -0.02
COL11A1-210ENST00000512756 CCP110O43303 1012 aa14.92□□□□□ -0.02
COL11A1-210ENST00000512756 CIZ1Q9ULV3 898 aaPredicted RBP14.92□□□□□ -0.02
COL11A1-210ENST00000512756 K7ELQ4 463 aaPredicted RBP14.92□□□□□ -0.02
COL11A1-210ENST00000512756 AEBP1Q8IUX7 1158 aa14.92□□□□□ -0.02
COL11A1-210ENST00000512756 SLC4A2P04920 1241 aa14.91□□□□□ -0.02
COL11A1-210ENST00000512756 ANKRD1Q15327 319 aa14.91□□□□□ -0.02
COL11A1-210ENST00000512756 SRCIN1Q9C0H9 1055 aa14.91□□□□□ -0.02
COL11A1-210ENST00000512756 CCDC27Q2M243 656 aa14.91□□□□□ -0.02
COL11A1-210ENST00000512756 LRRCC1Q9C099 1032 aa14.91□□□□□ -0.02
COL11A1-210ENST00000512756 ABTB2Q8N961 1025 aa14.91□□□□□ -0.02
COL11A1-210ENST00000512756 WDR33Q9C0J8 1336 aaKnown RBP14.91□□□□□ -0.02
COL11A1-210ENST00000512756 RBM33Q96EV2 1170 aaKnown RBP14.91□□□□□ -0.02
COL11A1-210ENST00000512756 C1orf115Q9H7X2 142 aa14.91□□□□□ -0.02
COL11A1-210ENST00000512756 SLC52A1Q9NWF4 448 aa14.91□□□□□ -0.02
COL11A1-210ENST00000512756 CYP46A1Q9Y6A2 500 aa14.9□□□□□ -0.02
COL11A1-210ENST00000512756 RPGRIP1LQ68CZ1 1315 aa14.9□□□□□ -0.02
COL11A1-210ENST00000512756 HDGFL1Q5TGJ6 251 aa14.9□□□□□ -0.02
COL11A1-210ENST00000512756 NUTM2GQ5VZR2 741 aa14.9□□□□□ -0.02
COL11A1-210ENST00000512756 CHD1LQ86WJ1 897 aa14.89□□□□□ -0.03
COL11A1-210ENST00000512756 ERCC4Q92889 916 aaPredicted RBP14.89□□□□□ -0.03
COL11A1-210ENST00000512756 CCDC43Q96MW1 224 aaKnown RBP14.89□□□□□ -0.03
COL11A1-210ENST00000512756 MSH5O43196 834 aa14.89□□□□□ -0.03
COL11A1-210ENST00000512756 NAP1L1P55209 391 aaKnown RBP14.89□□□□□ -0.03
COL11A1-210ENST00000512756 PDILTQ8N807 584 aa14.89□□□□□ -0.03
COL11A1-210ENST00000512756 HECW1Q76N89 1606 aa14.89□□□□□ -0.03
COL11A1-210ENST00000512756 JMYQ8N9B5 988 aa14.89□□□□□ -0.03
COL11A1-210ENST00000512756 DNAJC2Q99543 621 aaKnown RBP14.89□□□□□ -0.03
COL11A1-210ENST00000512756 DAPK1P53355 1430 aa14.89□□□□□ -0.03
COL11A1-210ENST00000512756 PRG4Q92954 1404 aaPredicted RBP14.89□□□□□ -0.03
COL11A1-210ENST00000512756 FIBPO43427 364 aa14.88□□□□□ -0.03
COL11A1-210ENST00000512756 ANKRD30BQ9BXX2 1392 aa14.88□□□□□ -0.03
COL11A1-210ENST00000512756 SULT6B1Q6IMI4 303 aa14.88□□□□□ -0.03
COL11A1-210ENST00000512756 CDK19Q9BWU1 502 aa14.88□□□□□ -0.03
COL11A1-210ENST00000512756 PIP4K2AP48426 406 aaPredicted RBP14.88□□□□□ -0.03
COL11A1-210ENST00000512756 FILIP1LQ4L180 1135 aa14.88□□□□□ -0.03
COL11A1-210ENST00000512756 CCDC192P0DO97 292 aa14.87□□□□□ -0.03
COL11A1-210ENST00000512756 TOP2BQ02880 1626 aa14.87□□□□□ -0.03
COL11A1-210ENST00000512756 ATAD2Q6PL18 1390 aa14.87□□□□□ -0.03
COL11A1-210ENST00000512756 PDIA4P13667 645 aaKnown RBP14.87□□□□□ -0.03
COL11A1-210ENST00000512756 STK38Q15208 465 aa14.87□□□□□ -0.03
COL11A1-210ENST00000512756 NOM1Q5C9Z4 860 aaKnown RBP14.87□□□□□ -0.03
COL11A1-210ENST00000512756 OFD1O75665 1012 aa14.87□□□□□ -0.03
COL11A1-210ENST00000512756 CABP1Q9NZU7 370 aa14.87□□□□□ -0.03
COL11A1-210ENST00000512756 FCHSD2O94868 740 aa14.87□□□□□ -0.03
COL11A1-210ENST00000512756 RPAP2Q8IXW5 612 aaPredicted RBP14.87□□□□□ -0.03
COL11A1-210ENST00000512756 SMARCE1Q969G3 411 aa14.86□□□□□ -0.03
COL11A1-210ENST00000512756 TXNDC2Q86VQ3 553 aa14.86□□□□□ -0.03
COL11A1-210ENST00000512756 SMC2O95347 1197 aa14.86□□□□□ -0.03
COL11A1-210ENST00000512756 SLFN5Q08AF3 891 aa14.86□□□□□ -0.03
COL11A1-210ENST00000512756 CCDC158Q5M9N0 1113 aa14.86□□□□□ -0.03
COL11A1-210ENST00000512756 BRPF3Q9ULD4 1205 aa14.86□□□□□ -0.03
COL11A1-210ENST00000512756 WDR97A6NE52 1622 aa14.85□□□□□ -0.03
COL11A1-210ENST00000512756 KRT85P78386 507 aa14.85□□□□□ -0.03
COL11A1-210ENST00000512756 SLC3A2P08195 630 aaKnown RBP14.85□□□□□ -0.03
COL11A1-210ENST00000512756 TXLNAP40222 546 aa14.85□□□□□ -0.03
COL11A1-210ENST00000512756 KIF6Q6ZMV9 814 aa14.85□□□□□ -0.03
COL11A1-210ENST00000512756 SUPT6HQ7KZ85 1726 aaKnown RBP14.85□□□□□ -0.03
COL11A1-210ENST00000512756 DDX24Q9GZR7 859 aaKnown RBP eCLIP14.85□□□□□ -0.03
COL11A1-210ENST00000512756 GRPEL1Q9HAV7 217 aa14.85□□□□□ -0.03
COL11A1-210ENST00000512756 EPS15P42566 896 aa14.84□□□□□ -0.03
COL11A1-210ENST00000512756 ZSCAN31Q96LW9 406 aaPredicted RBP14.84□□□□□ -0.03
COL11A1-210ENST00000512756 TATP17735 454 aaPredicted RBP14.84□□□□□ -0.03
COL11A1-210ENST00000512756 MCM4P33991 863 aa14.83□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 48.1 ms