RNA–Protein interactions for RNA: ENST00000512665.5

NEDD9-213, Transcript of neural precursor cell expressed, developmentally down-regulated 9, humanhuman

TSL 2

Gene NEDD9, Length 761 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD9-213ENST00000512665 PTGER2P43116 358 aa15.21■□□□□ 0.03
NEDD9-213ENST00000512665 DLC1Q96QB1 1528 aa15.21■□□□□ 0.03
NEDD9-213ENST00000512665 TRPM3Q9HCF6 1732 aaPredicted RBP15.2■□□□□ 0.02
NEDD9-213ENST00000512665 IFT172Q9UG01 1749 aa15.2■□□□□ 0.02
NEDD9-213ENST00000512665 CRYBG1Q9Y4K1 1723 aa15.2■□□□□ 0.02
NEDD9-213ENST00000512665 ALS2Q96Q42 1657 aa15.2■□□□□ 0.02
NEDD9-213ENST00000512665 C11orf95C9JLR9 678 aaPredicted RBP15.19■□□□□ 0.02
NEDD9-213ENST00000512665 SYT17Q9BSW7 474 aa15.19■□□□□ 0.02
NEDD9-213ENST00000512665 MAP3K5Q99683 1374 aa15.19■□□□□ 0.02
NEDD9-213ENST00000512665 FAM50AQ14320 339 aaKnown RBP15.18■□□□□ 0.02
NEDD9-213ENST00000512665 BARGINQ6ZT62 677 aa15.18■□□□□ 0.02
NEDD9-213ENST00000512665 RGPD8O14715 1765 aaPredicted RBP15.17■□□□□ 0.02
NEDD9-213ENST00000512665 PLEKHH1Q9ULM0 1364 aa15.17■□□□□ 0.02
NEDD9-213ENST00000512665 LMOD2Q6P5Q4 547 aa15.17■□□□□ 0.02
NEDD9-213ENST00000512665 WAPLQ7Z5K2 1190 aa15.17■□□□□ 0.02
NEDD9-213ENST00000512665 FHDC1Q9C0D6 1143 aaPredicted RBP15.16■□□□□ 0.02
NEDD9-213ENST00000512665 PLSCR1O15162 318 aa15.15■□□□□ 0.02
NEDD9-213ENST00000512665 APLP2Q06481 763 aa15.15■□□□□ 0.02
NEDD9-213ENST00000512665 PDE3BQ13370 1112 aa15.15■□□□□ 0.02
NEDD9-213ENST00000512665 ANKARQ7Z5J8 1434 aa15.15■□□□□ 0.02
NEDD9-213ENST00000512665 SHANK3Q9BYB0 1731 aa15.14■□□□□ 0.01
NEDD9-213ENST00000512665 SIRT1Q96EB6 747 aa15.14■□□□□ 0.01
NEDD9-213ENST00000512665 ANO8Q9HCE9 1232 aaPredicted RBP15.14■□□□□ 0.01
NEDD9-213ENST00000512665 PLEKHG5O94827 1062 aa15.13■□□□□ 0.01
NEDD9-213ENST00000512665 PRDM11Q9NQV5 511 aa15.13■□□□□ 0.01
NEDD9-213ENST00000512665 SGIP1Q9BQI5 828 aa15.12■□□□□ 0.01
NEDD9-213ENST00000512665 PEAK1Q9H792 1746 aa15.12■□□□□ 0.01
NEDD9-213ENST00000512665 ZBTB7AO95365 584 aa15.11■□□□□ 0.01
NEDD9-213ENST00000512665 PARP4Q9UKK3 1724 aaKnown RBP15.11■□□□□ 0.01
NEDD9-213ENST00000512665 GOLGB1Q14789 3259 aaKnown RBP15.1■□□□□ 0.01
NEDD9-213ENST00000512665 PDGFDQ9GZP0 370 aaPredicted RBP15.1■□□□□ 0.01
NEDD9-213ENST00000512665 MTFR1LQ9H019 292 aa15.09■□□□□ 0.01
NEDD9-213ENST00000512665 STK26Q9P289 416 aa15.09■□□□□ 0.01
NEDD9-213ENST00000512665 OVOS2A0A0G2JMS6 1433 aa15.09■□□□□ 0.01
NEDD9-213ENST00000512665 OVOS2A0A0J9YW53 1432 aa15.09■□□□□ 0.01
NEDD9-213ENST00000512665 OVOS2Q6IE36 1432 aa15.09■□□□□ 0.01
NEDD9-213ENST00000512665 SSH2Q76I76 1423 aa15.09■□□□□ 0.01
NEDD9-213ENST00000512665 YTHDC2Q9H6S0 1430 aaKnown RBP15.09■□□□□ 0.01
NEDD9-213ENST00000512665 GPRASP1Q5JY77 1395 aa15.08■□□□□ 0
NEDD9-213ENST00000512665 THRAP3Q9Y2W1 955 aaKnown RBP15.07■□□□□ 0
NEDD9-213ENST00000512665 KIAA0232Q92628 1395 aa15.07■□□□□ 0
NEDD9-213ENST00000512665 SBF2Q86WG5 1849 aa15.06■□□□□ 0
NEDD9-213ENST00000512665 HSPA6P17066 643 aa15.06■□□□□ 0
NEDD9-213ENST00000512665 ATF5Q9Y2D1 282 aaPredicted RBP15.06■□□□□ 0
NEDD9-213ENST00000512665 PIK3C2GO75747 1445 aa15.06■□□□□ 0
NEDD9-213ENST00000512665 PHRF1Q9P1Y6 1649 aaKnown RBP15.06■□□□□ 0
NEDD9-213ENST00000512665 TCP11L2Q8N4U5 519 aa15.05■□□□□ -0
NEDD9-213ENST00000512665 ADGRF5Q8IZF2 1346 aa15.05■□□□□ -0
NEDD9-213ENST00000512665 ACIN1Q9UKV3 1341 aaKnown RBP15.05■□□□□ -0
NEDD9-213ENST00000512665 DHX57Q6P158 1386 aaKnown RBP15.05■□□□□ -0
NEDD9-213ENST00000512665 ATP7BP35670 1465 aa15.04■□□□□ -0
NEDD9-213ENST00000512665 BCL9O00512 1426 aa15.04■□□□□ -0
NEDD9-213ENST00000512665 AATKQ6ZMQ8 1374 aa15.04■□□□□ -0
NEDD9-213ENST00000512665 ANKRD30BQ9BXX2 1392 aa15.04■□□□□ -0
NEDD9-213ENST00000512665 STRN4Q9NRL3 753 aa15.04■□□□□ -0
NEDD9-213ENST00000512665 ARXQ96QS3 562 aa15.03■□□□□ -0
NEDD9-213ENST00000512665 BCL11BQ9C0K0 894 aaPredicted RBP15.03■□□□□ -0
NEDD9-213ENST00000512665 LMO7Q8WWI1 1683 aa15.03■□□□□ -0
NEDD9-213ENST00000512665 EIF3AQ14152 1382 aaKnown RBP15.02■□□□□ -0
NEDD9-213ENST00000512665 GPR162Q16538 588 aa15.02■□□□□ -0
NEDD9-213ENST00000512665 PROM2Q8N271 834 aa15.02■□□□□ -0
NEDD9-213ENST00000512665 PMFBP1Q8TBY8 1022 aa15.02■□□□□ -0
NEDD9-213ENST00000512665 STK32BQ9NY57 414 aa15.02■□□□□ -0
NEDD9-213ENST00000512665 USP35Q9P2H5 1018 aa15.02■□□□□ -0
NEDD9-213ENST00000512665 SLC15A2Q16348 729 aa15.01□□□□□ -0.01
NEDD9-213ENST00000512665 TMEM132EQ6IEE7 984 aa15.01□□□□□ -0.01
NEDD9-213ENST00000512665 CHRNA2Q15822 529 aa15□□□□□ -0.01
NEDD9-213ENST00000512665 LRRC37A3O60309 1634 aa14.99□□□□□ -0.01
NEDD9-213ENST00000512665 CPDO75976 1380 aa14.98□□□□□ -0.01
NEDD9-213ENST00000512665 TULP4Q9NRJ4 1543 aa14.98□□□□□ -0.01
NEDD9-213ENST00000512665 EVA1CP58658 441 aa14.98□□□□□ -0.01
NEDD9-213ENST00000512665 LARP1Q6PKG0 1096 aaKnown RBP14.98□□□□□ -0.01
NEDD9-213ENST00000512665 SPATA31E1Q6ZUB1 1445 aa14.98□□□□□ -0.01
NEDD9-213ENST00000512665 COL24A1Q17RW2 1714 aa14.96□□□□□ -0.01
NEDD9-213ENST00000512665 ATP10DQ9P241 1426 aa14.96□□□□□ -0.01
NEDD9-213ENST00000512665 PAPPAQ13219 1627 aa14.95□□□□□ -0.02
NEDD9-213ENST00000512665 TXNRD1Q16881 649 aa14.95□□□□□ -0.02
NEDD9-213ENST00000512665 COL5A2P05997 1499 aaPredicted RBP14.95□□□□□ -0.02
NEDD9-213ENST00000512665 CRB1P82279 1406 aa14.94□□□□□ -0.02
NEDD9-213ENST00000512665 PRAM1Q96QH2 718 aa14.94□□□□□ -0.02
NEDD9-213ENST00000512665 PRR36Q9H6K5 1346 aa14.93□□□□□ -0.02
NEDD9-213ENST00000512665 GRIN3BO60391 1043 aa14.93□□□□□ -0.02
NEDD9-213ENST00000512665 ZC3H6P61129 1189 aaKnown RBP14.93□□□□□ -0.02
NEDD9-213ENST00000512665 ADCY9O60503 1353 aa14.93□□□□□ -0.02
NEDD9-213ENST00000512665 PAK3O75914 559 aaPredicted RBP14.92□□□□□ -0.02
NEDD9-213ENST00000512665 SLC34A2O95436 690 aa14.92□□□□□ -0.02
NEDD9-213ENST00000512665 PTF1AQ7RTS3 328 aa14.92□□□□□ -0.02
NEDD9-213ENST00000512665 C14orf93Q9H972 538 aaKnown RBP14.92□□□□□ -0.02
NEDD9-213ENST00000512665 GPBP1L1Q9HC44 474 aaPredicted RBP14.92□□□□□ -0.02
NEDD9-213ENST00000512665 ITSN1Q15811 1721 aa14.91□□□□□ -0.02
NEDD9-213ENST00000512665 TOPAZ1Q8N9V7 1692 aa14.9□□□□□ -0.02
NEDD9-213ENST00000512665 PRELPP51888 382 aa14.9□□□□□ -0.02
NEDD9-213ENST00000512665 DDB1Q16531 1140 aa14.9□□□□□ -0.02
NEDD9-213ENST00000512665 NGDNQ8NEJ9 315 aaKnown RBP14.9□□□□□ -0.02
NEDD9-213ENST00000512665 AKAP12Q02952 1782 aa14.9□□□□□ -0.02
NEDD9-213ENST00000512665 WNK3Q9BYP7 1800 aa14.89□□□□□ -0.03
NEDD9-213ENST00000512665 APLP1P51693 650 aa14.89□□□□□ -0.03
NEDD9-213ENST00000512665 SLC16A10Q8TF71 515 aa14.89□□□□□ -0.03
NEDD9-213ENST00000512665 USP19O94966 1318 aa14.89□□□□□ -0.03
NEDD9-213ENST00000512665 QSER1Q2KHR3 1735 aa14.89□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms