RNA–Protein interactions for RNA: ENST00000512019.1

SMAD1-211, Transcript of SMAD family member 1, humanhuman

TSL 2

Gene SMAD1, Length 847 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD1-211ENST00000512019 SBNO2Q9Y2G9 1366 aa27.47■■□□□ 1.99
SMAD1-211ENST00000512019 MINK1Q8N4C8 1332 aaPredicted RBP27.46■■□□□ 1.99
SMAD1-211ENST00000512019 ST20-MTHFSA0A0A6YYL1 179 aa27.46■■□□□ 1.99
SMAD1-211ENST00000512019 HAP1P54257 671 aaPredicted RBP27.46■■□□□ 1.99
SMAD1-211ENST00000512019 ALS2Q96Q42 1657 aa27.46■■□□□ 1.99
SMAD1-211ENST00000512019 PRR36Q9H6K5 1346 aa27.44■■□□□ 1.98
SMAD1-211ENST00000512019 HSPA5P11021 654 aaKnown RBP27.43■■□□□ 1.98
SMAD1-211ENST00000512019 TULP4Q9NRJ4 1543 aa27.42■■□□□ 1.98
SMAD1-211ENST00000512019 SLC24A1O60721 1099 aa27.42■■□□□ 1.98
SMAD1-211ENST00000512019 ARHGEF10O15013 1369 aa27.42■■□□□ 1.98
SMAD1-211ENST00000512019 NRAPQ86VF7 1730 aa27.41■■□□□ 1.98
SMAD1-211ENST00000512019 CRYBG1Q9Y4K1 1723 aa27.4■■□□□ 1.98
SMAD1-211ENST00000512019 WASLO00401 505 aaPredicted RBP27.37■■□□□ 1.97
SMAD1-211ENST00000512019 ITSN1Q15811 1721 aa27.37■■□□□ 1.97
SMAD1-211ENST00000512019 VPS72Q15906 364 aa27.37■■□□□ 1.97
SMAD1-211ENST00000512019 TESK2Q96S53 571 aa27.37■■□□□ 1.97
SMAD1-211ENST00000512019 FAM83GA6ND36 823 aa27.36■■□□□ 1.97
SMAD1-211ENST00000512019 EVC2Q86UK5 1308 aa27.36■■□□□ 1.97
SMAD1-211ENST00000512019 CCDC125Q86Z20 511 aa27.34■■□□□ 1.97
SMAD1-211ENST00000512019 SEPT12Q8IYM1 358 aa27.34■■□□□ 1.97
SMAD1-211ENST00000512019 CCDC9Q9Y3X0 531 aaKnown RBP27.34■■□□□ 1.97
SMAD1-211ENST00000512019 COL14A1Q05707 1796 aaKnown RBP27.33■■□□□ 1.97
SMAD1-211ENST00000512019 TMF1P82094 1093 aa27.32■■□□□ 1.96
SMAD1-211ENST00000512019 ATP7BP35670 1465 aa27.31■■□□□ 1.96
SMAD1-211ENST00000512019 BLMP54132 1417 aaPredicted RBP27.3■■□□□ 1.96
SMAD1-211ENST00000512019 CDK19Q9BWU1 502 aa27.29■■□□□ 1.96
SMAD1-211ENST00000512019 ONECUT3O60422 494 aaPredicted RBP27.28■■□□□ 1.96
SMAD1-211ENST00000512019 SRPK2P78362 688 aaKnown RBP27.28■■□□□ 1.96
SMAD1-211ENST00000512019 NGDNQ8NEJ9 315 aaKnown RBP27.28■■□□□ 1.96
SMAD1-211ENST00000512019 ZRANB1Q9UGI0 708 aa27.28■■□□□ 1.96
SMAD1-211ENST00000512019 TOPAZ1Q8N9V7 1692 aa27.27■■□□□ 1.96
SMAD1-211ENST00000512019 CDCA8Q53HL2 280 aa27.27■■□□□ 1.96
SMAD1-211ENST00000512019 BTG4Q9NY30 223 aa27.27■■□□□ 1.96
SMAD1-211ENST00000512019 PHRF1Q9P1Y6 1649 aaKnown RBP27.26■■□□□ 1.95
SMAD1-211ENST00000512019 PAK3O75914 559 aaPredicted RBP27.25■■□□□ 1.95
SMAD1-211ENST00000512019 DEFB132Q7Z7B7 95 aa27.25■■□□□ 1.95
SMAD1-211ENST00000512019 NUDT16Q96DE0 195 aaKnown RBP27.25■■□□□ 1.95
SMAD1-211ENST00000512019 KRT27Q7Z3Y8 459 aa27.23■■□□□ 1.95
SMAD1-211ENST00000512019 PUS7Q96PZ0 661 aaKnown RBP27.23■■□□□ 1.95
SMAD1-211ENST00000512019 CABP2Q9NPB3 220 aa27.23■■□□□ 1.95
SMAD1-211ENST00000512019 FAM98CQ17RN3 349 aaKnown RBP27.21■■□□□ 1.95
SMAD1-211ENST00000512019 A0A0G2JS52 829 aa27.2■■□□□ 1.94
SMAD1-211ENST00000512019 MYT1Q01538 1121 aa27.2■■□□□ 1.94
SMAD1-211ENST00000512019 THSD7AQ9UPZ6 1657 aa27.17■■□□□ 1.94
SMAD1-211ENST00000512019 SRCAPQ6ZRS2 3230 aa27.17■■□□□ 1.94
SMAD1-211ENST00000512019 PRDM11Q9NQV5 511 aa27.16■■□□□ 1.94
SMAD1-211ENST00000512019 CCDC61Q9Y6R9 512 aa27.16■■□□□ 1.94
SMAD1-211ENST00000512019 SPATA31A5Q5VU36 1347 aa27.16■■□□□ 1.94
SMAD1-211ENST00000512019 SPATA31A7Q8IWB4 1347 aa27.16■■□□□ 1.94
SMAD1-211ENST00000512019 SF3B2Q13435 895 aaKnown RBP27.15■■□□□ 1.94
SMAD1-211ENST00000512019 NUTM2GQ5VZR2 741 aa27.15■■□□□ 1.94
SMAD1-211ENST00000512019 POLR3AO14802 1390 aaPredicted RBP27.14■■□□□ 1.94
SMAD1-211ENST00000512019 KIAA0232Q92628 1395 aa27.14■■□□□ 1.94
SMAD1-211ENST00000512019 NINLQ9Y2I6 1382 aa27.14■■□□□ 1.94
SMAD1-211ENST00000512019 PPIP5K1Q6PFW1 1433 aa27.14■■□□□ 1.93
SMAD1-211ENST00000512019 ACEP12821 1306 aa27.14■■□□□ 1.93
SMAD1-211ENST00000512019 CHRNA2Q15822 529 aa27.13■■□□□ 1.93
SMAD1-211ENST00000512019 RGPD1P0DJD0 1748 aa27.13■■□□□ 1.93
SMAD1-211ENST00000512019 FAM182BQ5T319 152 aa27.12■■□□□ 1.93
SMAD1-211ENST00000512019 POLR3GLQ9BT43 218 aa27.12■■□□□ 1.93
SMAD1-211ENST00000512019 KIF7Q2M1P5 1343 aa27.12■■□□□ 1.93
SMAD1-211ENST00000512019 NRKQ7Z2Y5 1582 aa27.11■■□□□ 1.93
SMAD1-211ENST00000512019 C11orf95C9JLR9 678 aaPredicted RBP27.11■■□□□ 1.93
SMAD1-211ENST00000512019 CCDC7Q96M83 1385 aa27.1■■□□□ 1.93
SMAD1-211ENST00000512019 ZC3H6P61129 1189 aaKnown RBP27.09■■□□□ 1.93
SMAD1-211ENST00000512019 TNS1Q9HBL0 1735 aaKnown RBP27.09■■□□□ 1.93
SMAD1-211ENST00000512019 MYOM1P52179 1685 aa27.08■■□□□ 1.93
SMAD1-211ENST00000512019 PLEKHG3A1L390 1219 aa27.08■■□□□ 1.93
SMAD1-211ENST00000512019 TMC1Q8TDI8 760 aa27.08■■□□□ 1.93
SMAD1-211ENST00000512019 CABP1Q9NZU7 370 aa27.07■■□□□ 1.92
SMAD1-211ENST00000512019 WASHC2AQ641Q2 1341 aa27.07■■□□□ 1.92
SMAD1-211ENST00000512019 STRN4Q9NRL3 753 aa27.06■■□□□ 1.92
SMAD1-211ENST00000512019 SPATA31A1Q5TZJ5 1347 aa27.06■■□□□ 1.92
SMAD1-211ENST00000512019 LMO7Q8WWI1 1683 aa27.05■■□□□ 1.92
SMAD1-211ENST00000512019 BAG6P46379 1132 aa27.04■■□□□ 1.92
SMAD1-211ENST00000512019 ZNF316A6NFI3 1004 aaPredicted RBP27.03■■□□□ 1.92
SMAD1-211ENST00000512019 CAMTA1Q9Y6Y1 1673 aa27.02■■□□□ 1.92
SMAD1-211ENST00000512019 ABTB2Q8N961 1025 aa27.02■■□□□ 1.92
SMAD1-211ENST00000512019 SLC12A5Q9H2X9 1139 aa27.02■■□□□ 1.92
SMAD1-211ENST00000512019 TERF2IPQ9NYB0 399 aa27.02■■□□□ 1.92
SMAD1-211ENST00000512019 ANKRD36BQ8N2N9 1353 aa27■■□□□ 1.91
SMAD1-211ENST00000512019 EN1Q05925 392 aaPredicted RBP27■■□□□ 1.91
SMAD1-211ENST00000512019 HDGFL2Q7Z4V5 671 aaPredicted RBP27■■□□□ 1.91
SMAD1-211ENST00000512019 SSH2Q76I76 1423 aa26.99■■□□□ 1.91
SMAD1-211ENST00000512019 AKAP12Q02952 1782 aa26.99■■□□□ 1.91
SMAD1-211ENST00000512019 USP19O94966 1318 aa26.99■■□□□ 1.91
SMAD1-211ENST00000512019 LRP5O75197 1615 aa26.99■■□□□ 1.91
SMAD1-211ENST00000512019 PSDA5PKW4 1024 aaPredicted RBP26.99■■□□□ 1.91
SMAD1-211ENST00000512019 USP35Q9P2H5 1018 aa26.99■■□□□ 1.91
SMAD1-211ENST00000512019 CD163L1Q9NR16 1453 aa26.99■■□□□ 1.91
SMAD1-211ENST00000512019 CPSF1Q10570 1443 aaKnown RBP26.99■■□□□ 1.91
SMAD1-211ENST00000512019 ZNF692Q9BU19 519 aaPredicted RBP26.97■■□□□ 1.91
SMAD1-211ENST00000512019 A0A1W2PP64 1363 aa26.97■■□□□ 1.91
SMAD1-211ENST00000512019 MON2Q7Z3U7 1717 aa26.96■■□□□ 1.91
SMAD1-211ENST00000512019 CPDO75976 1380 aa26.96■■□□□ 1.91
SMAD1-211ENST00000512019 EVA1CP58658 441 aa26.95■■□□□ 1.9
SMAD1-211ENST00000512019 LARP1Q6PKG0 1096 aaKnown RBP26.95■■□□□ 1.9
SMAD1-211ENST00000512019 USP6P35125 1406 aa26.95■■□□□ 1.9
SMAD1-211ENST00000512019 KTN1Q86UP2 1357 aaKnown RBP26.95■■□□□ 1.9
SMAD1-211ENST00000512019 BRD4O60885 1362 aaPredicted RBP26.94■■□□□ 1.9
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms