RNA–Protein interactions for RNA: ENST00000511822.1

CDH9-204, Transcript of cadherin 9, humanhuman

TSL 4

Gene CDH9, Length 532 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH9-204ENST00000511822 PPP1R18Q6NYC8 613 aa11.09□□□□□ -0.63
CDH9-204ENST00000511822 RDH13Q8NBN7 331 aa11.09□□□□□ -0.63
CDH9-204ENST00000511822 ZFYVE16Q7Z3T8 1539 aa11.09□□□□□ -0.63
CDH9-204ENST00000511822 ARID3CA6NKF2 412 aa11.08□□□□□ -0.64
CDH9-204ENST00000511822 ILDR2Q71H61 639 aa11.08□□□□□ -0.64
CDH9-204ENST00000511822 SULF1Q8IWU6 871 aa11.08□□□□□ -0.64
CDH9-204ENST00000511822 CCDC102AQ96A19 550 aa11.08□□□□□ -0.64
CDH9-204ENST00000511822 ARHGEF12Q9NZN5 1544 aa11.06□□□□□ -0.64
CDH9-204ENST00000511822 TLL1O43897 1013 aa11.06□□□□□ -0.64
CDH9-204ENST00000511822 EIF4ENIF1Q9NRA8 985 aaKnown RBP11.06□□□□□ -0.64
CDH9-204ENST00000511822 YEATS2Q9ULM3 1422 aa11.06□□□□□ -0.64
CDH9-204ENST00000511822 SIGLEC1Q9BZZ2 1709 aa11.05□□□□□ -0.64
CDH9-204ENST00000511822 SPATA31D1Q6ZQQ2 1576 aa11.04□□□□□ -0.64
CDH9-204ENST00000511822 NR1I2O75469 434 aa11.04□□□□□ -0.64
CDH9-204ENST00000511822 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP11.04□□□□□ -0.64
CDH9-204ENST00000511822 GCGRP47871 477 aa11.03□□□□□ -0.64
CDH9-204ENST00000511822 PUS10Q3MIT2 529 aaKnown RBP11.03□□□□□ -0.64
CDH9-204ENST00000511822 PREX1Q8TCU6 1659 aa11.02□□□□□ -0.64
CDH9-204ENST00000511822 GGCXP38435 758 aa11.02□□□□□ -0.65
CDH9-204ENST00000511822 MDM2Q00987 491 aaPredicted RBP11.02□□□□□ -0.65
CDH9-204ENST00000511822 FER1L4A9Z1Z3 1794 aa11.02□□□□□ -0.65
CDH9-204ENST00000511822 HECW1Q76N89 1606 aa11.02□□□□□ -0.65
CDH9-204ENST00000511822 C9orf84Q5VXU9 1444 aa11.01□□□□□ -0.65
CDH9-204ENST00000511822 IQSEC2Q5JU85 1478 aa11.01□□□□□ -0.65
CDH9-204ENST00000511822 ZMYND10O75800 440 aa11.01□□□□□ -0.65
CDH9-204ENST00000511822 FUT2Q10981 343 aa11.01□□□□□ -0.65
CDH9-204ENST00000511822 ZC3H15Q8WU90 426 aaKnown RBP11.01□□□□□ -0.65
CDH9-204ENST00000511822 TMUB1Q9BVT8 246 aa11.01□□□□□ -0.65
CDH9-204ENST00000511822 PTPRTO14522 1441 aa11.01□□□□□ -0.65
CDH9-204ENST00000511822 ATP10AO60312 1499 aa11□□□□□ -0.65
CDH9-204ENST00000511822 PLEKHD1A6NEE1 506 aa11□□□□□ -0.65
CDH9-204ENST00000511822 ADH1BP00325 375 aa11□□□□□ -0.65
CDH9-204ENST00000511822 BARGINQ6ZT62 677 aa11□□□□□ -0.65
CDH9-204ENST00000511822 SCUBE3Q8IX30 993 aa11□□□□□ -0.65
CDH9-204ENST00000511822 IRX2Q9BZI1 471 aaPredicted RBP11□□□□□ -0.65
CDH9-204ENST00000511822 UHRF1BP1Q6BDS2 1440 aa11□□□□□ -0.65
CDH9-204ENST00000511822 CD46P15529 392 aa10.99□□□□□ -0.65
CDH9-204ENST00000511822 ATP6V1AP38606 617 aa10.99□□□□□ -0.65
CDH9-204ENST00000511822 MORN1Q5T089 497 aa10.99□□□□□ -0.65
CDH9-204ENST00000511822 PRKD2Q9BZL6 878 aa10.98□□□□□ -0.65
CDH9-204ENST00000511822 PLCH2O75038 1416 aa10.98□□□□□ -0.65
CDH9-204ENST00000511822 SCAPERQ9BY12 1400 aa10.98□□□□□ -0.65
CDH9-204ENST00000511822 RNF223E7ERA6 249 aa10.97□□□□□ -0.65
CDH9-204ENST00000511822 KRI1Q8N9T8 703 aaKnown RBP10.97□□□□□ -0.65
CDH9-204ENST00000511822 STRCQ7RTU9 1775 aa10.97□□□□□ -0.65
CDH9-204ENST00000511822 S1PR4O95977 384 aa10.96□□□□□ -0.65
CDH9-204ENST00000511822 CLCN1P35523 988 aa10.96□□□□□ -0.65
CDH9-204ENST00000511822 MLECQ14165 292 aa10.96□□□□□ -0.65
CDH9-204ENST00000511822 GPCPD1Q9NPB8 672 aa10.96□□□□□ -0.65
CDH9-204ENST00000511822 V9GY48 417 aaPredicted RBP10.96□□□□□ -0.65
CDH9-204ENST00000511822 LTBP4Q8N2S1 1624 aa10.95□□□□□ -0.66
CDH9-204ENST00000511822 REREQ9P2R6 1566 aa10.95□□□□□ -0.66
CDH9-204ENST00000511822 KDM5CP41229 1560 aa10.94□□□□□ -0.66
CDH9-204ENST00000511822 ZNF518AQ6AHZ1 1483 aa10.94□□□□□ -0.66
CDH9-204ENST00000511822 SPSB2Q99619 263 aa10.94□□□□□ -0.66
CDH9-204ENST00000511822 SLC27A5Q9Y2P5 690 aa10.94□□□□□ -0.66
CDH9-204ENST00000511822 THAP11Q96EK4 314 aa10.93□□□□□ -0.66
CDH9-204ENST00000511822 SLC6A16Q9GZN6 736 aa10.93□□□□□ -0.66
CDH9-204ENST00000511822 FAM217BQ9NTX9 383 aaPredicted RBP10.93□□□□□ -0.66
CDH9-204ENST00000511822 ANKLE1Q8NAG6 615 aa10.92□□□□□ -0.66
CDH9-204ENST00000511822 NCOA1Q15788 1441 aa10.92□□□□□ -0.66
CDH9-204ENST00000511822 KDM4AO75164 1064 aa10.91□□□□□ -0.66
CDH9-204ENST00000511822 CEBPAP49715 358 aaPredicted RBP10.91□□□□□ -0.66
CDH9-204ENST00000511822 GRIPAP1Q4V328 841 aa10.91□□□□□ -0.66
CDH9-204ENST00000511822 SALL2Q9Y467 1007 aaPredicted RBP10.91□□□□□ -0.66
CDH9-204ENST00000511822 AGLP35573 1532 aa10.9□□□□□ -0.66
CDH9-204ENST00000511822 CDK13Q14004 1512 aaKnown RBP10.9□□□□□ -0.66
CDH9-204ENST00000511822 PPEF1O14829 653 aaPredicted RBP10.9□□□□□ -0.66
CDH9-204ENST00000511822 EFCAB2Q5VUJ9 269 aa10.9□□□□□ -0.66
CDH9-204ENST00000511822 EMID1Q96A84 441 aaPredicted RBP10.9□□□□□ -0.66
CDH9-204ENST00000511822 REPIN1Q9BWE0 567 aaKnown RBP10.9□□□□□ -0.66
CDH9-204ENST00000511822 EEA1Q15075 1411 aa10.9□□□□□ -0.66
CDH9-204ENST00000511822 DIP2CQ9Y2E4 1556 aa10.9□□□□□ -0.67
CDH9-204ENST00000511822 SETD1BQ9UPS6 1966 aaKnown RBP10.89□□□□□ -0.67
CDH9-204ENST00000511822 FMNL1O95466 1100 aaPredicted RBP10.89□□□□□ -0.67
CDH9-204ENST00000511822 AMHR2Q16671 573 aa10.89□□□□□ -0.67
CDH9-204ENST00000511822 TRAPPC8Q9Y2L5 1435 aa10.89□□□□□ -0.67
CDH9-204ENST00000511822 MLH3Q9UHC1 1453 aa10.88□□□□□ -0.67
CDH9-204ENST00000511822 USP46P62068 366 aa10.88□□□□□ -0.67
CDH9-204ENST00000511822 BRICD5Q6PL45 260 aa10.88□□□□□ -0.67
CDH9-204ENST00000511822 CNTLNQ9NXG0 1405 aa10.88□□□□□ -0.67
CDH9-204ENST00000511822 NPATQ14207 1427 aa10.87□□□□□ -0.67
CDH9-204ENST00000511822 FAM160A2Q8N612 972 aaPredicted RBP10.87□□□□□ -0.67
CDH9-204ENST00000511822 C3P01024 1663 aa10.86□□□□□ -0.67
CDH9-204ENST00000511822 SLC19A1P41440 591 aa10.86□□□□□ -0.67
CDH9-204ENST00000511822 RNF19BQ6ZMZ0 732 aa10.86□□□□□ -0.67
CDH9-204ENST00000511822 MYO5CQ9NQX4 1742 aa10.86□□□□□ -0.67
CDH9-204ENST00000511822 KIF14Q15058 1648 aa10.85□□□□□ -0.67
CDH9-204ENST00000511822 HOXA2O43364 376 aa10.85□□□□□ -0.67
CDH9-204ENST00000511822 TTLL12Q14166 644 aaPredicted RBP10.85□□□□□ -0.67
CDH9-204ENST00000511822 Q3C1V9 767 aa10.85□□□□□ -0.67
CDH9-204ENST00000511822 TROQ12816 1431 aaPredicted RBP10.84□□□□□ -0.67
CDH9-204ENST00000511822 ABCA6Q8N139 1617 aa10.84□□□□□ -0.67
CDH9-204ENST00000511822 LAPTM4AQ15012 233 aa10.84□□□□□ -0.67
CDH9-204ENST00000511822 PLA2G2CQ5R387 149 aa10.84□□□□□ -0.67
CDH9-204ENST00000511822 HLA-CQ95604 372 aa10.84□□□□□ -0.67
CDH9-204ENST00000511822 ARHGAP5Q13017 1502 aa10.84□□□□□ -0.67
CDH9-204ENST00000511822 FMN1Q68DA7 1419 aa10.84□□□□□ -0.67
CDH9-204ENST00000511822 PLA2R1Q13018 1463 aa10.83□□□□□ -0.68
CDH9-204ENST00000511822 SSTR3P32745 418 aaPredicted RBP10.83□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms