RNA–Protein interactions for RNA: ENST00000511816.1

CALCOCO2-220, Transcript of calcium binding and coiled-coil domain 2, humanhuman

TSL 2

Gene CALCOCO2, Length 562 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALCOCO2-220ENST00000511816 ZNF330Q9Y3S2 320 aaPredicted RBP7.57□□□□□ -1.2
CALCOCO2-220ENST00000511816 ARMC2Q8NEN0 867 aa7.56□□□□□ -1.2
CALCOCO2-220ENST00000511816 EVA1BQ9NVM1 165 aa7.56□□□□□ -1.2
CALCOCO2-220ENST00000511816 KCNH2Q12809 1159 aa7.55□□□□□ -1.2
CALCOCO2-220ENST00000511816 ZNF697Q5TEC3 545 aa7.55□□□□□ -1.2
CALCOCO2-220ENST00000511816 SPRYD7Q5W111 196 aa7.55□□□□□ -1.2
CALCOCO2-220ENST00000511816 ZNF598Q86UK7 904 aaKnown RBP7.55□□□□□ -1.2
CALCOCO2-220ENST00000511816 LRRN4Q8WUT4 740 aa7.55□□□□□ -1.2
CALCOCO2-220ENST00000511816 POM121Q96HA1 1249 aa7.55□□□□□ -1.2
CALCOCO2-220ENST00000511816 TRIM32Q13049 653 aa7.54□□□□□ -1.2
CALCOCO2-220ENST00000511816 GJD4Q96KN9 370 aaPredicted RBP7.54□□□□□ -1.2
CALCOCO2-220ENST00000511816 UNC93B1Q9H1C4 597 aa7.54□□□□□ -1.2
CALCOCO2-220ENST00000511816 TBC1D2BQ9UPU7 963 aa7.54□□□□□ -1.2
CALCOCO2-220ENST00000511816 LAPTM4AQ15012 233 aa7.53□□□□□ -1.2
CALCOCO2-220ENST00000511816 PLA2G2CQ5R387 149 aa7.53□□□□□ -1.2
CALCOCO2-220ENST00000511816 LIAT1Q6ZQX7 453 aa7.53□□□□□ -1.2
CALCOCO2-220ENST00000511816 FNBP4Q8N3X1 1017 aaPredicted RBP7.53□□□□□ -1.2
CALCOCO2-220ENST00000511816 ARXQ96QS3 562 aa7.53□□□□□ -1.2
CALCOCO2-220ENST00000511816 IRX2Q9BZI1 471 aaPredicted RBP7.53□□□□□ -1.2
CALCOCO2-220ENST00000511816 NR6A1Q15406 480 aa7.52□□□□□ -1.21
CALCOCO2-220ENST00000511816 NBPF14Q5TI25 921 aa7.52□□□□□ -1.21
CALCOCO2-220ENST00000511816 HMX1Q9NP08 348 aaPredicted RBP7.52□□□□□ -1.21
CALCOCO2-220ENST00000511816 ZNF777Q9ULD5 760 aaPredicted RBP7.52□□□□□ -1.21
CALCOCO2-220ENST00000511816 WNT7BP56706 349 aa7.51□□□□□ -1.21
CALCOCO2-220ENST00000511816 ZNF592Q92610 1267 aa7.51□□□□□ -1.21
CALCOCO2-220ENST00000511816 CCDC97Q96F63 343 aaPredicted RBP7.51□□□□□ -1.21
CALCOCO2-220ENST00000511816 ZC3H4Q9UPT8 1303 aaKnown RBP7.51□□□□□ -1.21
CALCOCO2-220ENST00000511816 PER1O15534 1290 aaPredicted RBP7.5□□□□□ -1.21
CALCOCO2-220ENST00000511816 AGERQ15109 404 aa7.5□□□□□ -1.21
CALCOCO2-220ENST00000511816 TRIM34Q9BYJ4 488 aa7.5□□□□□ -1.21
CALCOCO2-220ENST00000511816 MAP10Q9P2G4 905 aa7.5□□□□□ -1.21
CALCOCO2-220ENST00000511816 SERPINA10Q9UK55 444 aa7.5□□□□□ -1.21
CALCOCO2-220ENST00000511816 PDZRN3Q9UPQ7 1066 aa7.5□□□□□ -1.21
CALCOCO2-220ENST00000511816 ARID3CA6NKF2 412 aa7.49□□□□□ -1.21
CALCOCO2-220ENST00000511816 F12P00748 615 aaPredicted RBP7.49□□□□□ -1.21
CALCOCO2-220ENST00000511816 SOX11P35716 441 aa7.49□□□□□ -1.21
CALCOCO2-220ENST00000511816 FOXC1Q12948 553 aa7.49□□□□□ -1.21
CALCOCO2-220ENST00000511816 GPKOWQ92917 476 aaPredicted RBP eCLIP7.49□□□□□ -1.21
CALCOCO2-220ENST00000511816 GFRA3O60609 400 aa7.48□□□□□ -1.21
CALCOCO2-220ENST00000511816 EHBP1Q8NDI1 1231 aa7.48□□□□□ -1.21
CALCOCO2-220ENST00000511816 CALR3Q96L12 384 aaKnown RBP7.48□□□□□ -1.21
CALCOCO2-220ENST00000511816 FKBPLQ9UIM3 349 aa7.48□□□□□ -1.21
CALCOCO2-220ENST00000511816 EIF4G2P78344 907 aaKnown RBP eCLIP7.47□□□□□ -1.21
CALCOCO2-220ENST00000511816 LINC01559Q495D7 138 aa7.47□□□□□ -1.21
CALCOCO2-220ENST00000511816 PTCRAQ6ISU1 281 aaPredicted RBP7.47□□□□□ -1.21
CALCOCO2-220ENST00000511816 BPHLQ86WA6 291 aaPredicted RBP7.47□□□□□ -1.21
CALCOCO2-220ENST00000511816 HOMEZQ8IX15 550 aa7.47□□□□□ -1.21
CALCOCO2-220ENST00000511816 CYP4X1Q8N118 509 aa7.47□□□□□ -1.21
CALCOCO2-220ENST00000511816 ZNF511Q8NB15 262 aa7.47□□□□□ -1.21
CALCOCO2-220ENST00000511816 BAP1Q92560 729 aa7.47□□□□□ -1.21
CALCOCO2-220ENST00000511816 ARID3AQ99856 593 aa7.47□□□□□ -1.21
CALCOCO2-220ENST00000511816 TTC24A2A3L6 582 aaPredicted RBP7.46□□□□□ -1.22
CALCOCO2-220ENST00000511816 WNT7AO00755 349 aa7.46□□□□□ -1.22
CALCOCO2-220ENST00000511816 EPS8L1Q8TE68 723 aa7.46□□□□□ -1.22
CALCOCO2-220ENST00000511816 TNFRSF10AO00220 468 aa7.45□□□□□ -1.22
CALCOCO2-220ENST00000511816 NRG2O14511 850 aaPredicted RBP7.45□□□□□ -1.22
CALCOCO2-220ENST00000511816 PRR20EP86478 221 aa7.45□□□□□ -1.22
CALCOCO2-220ENST00000511816 PRR20CP86479 221 aa7.45□□□□□ -1.22
CALCOCO2-220ENST00000511816 PRR20DP86480 221 aa7.45□□□□□ -1.22
CALCOCO2-220ENST00000511816 PRR20BP86481 221 aa7.45□□□□□ -1.22
CALCOCO2-220ENST00000511816 PRR20AP86496 221 aa7.45□□□□□ -1.22
CALCOCO2-220ENST00000511816 PTK2Q05397 1052 aa7.45□□□□□ -1.22
CALCOCO2-220ENST00000511816 SEMA3FQ13275 785 aa7.45□□□□□ -1.22
CALCOCO2-220ENST00000511816 RC3H1Q5TC82 1133 aaKnown RBP7.45□□□□□ -1.22
CALCOCO2-220ENST00000511816 EMID1Q96A84 441 aaPredicted RBP7.45□□□□□ -1.22
CALCOCO2-220ENST00000511816 GPSM3Q9Y4H4 160 aa7.45□□□□□ -1.22
CALCOCO2-220ENST00000511816 ZBBXA8MT70 800 aa7.44□□□□□ -1.22
CALCOCO2-220ENST00000511816 VARSP26640 1264 aaKnown RBP7.44□□□□□ -1.22
CALCOCO2-220ENST00000511816 MCCD1P59942 119 aaPredicted RBP7.44□□□□□ -1.22
CALCOCO2-220ENST00000511816 SH3BP2P78314 561 aa7.44□□□□□ -1.22
CALCOCO2-220ENST00000511816 NR1H3Q13133 447 aa7.44□□□□□ -1.22
CALCOCO2-220ENST00000511816 IRF5Q13568 498 aa7.44□□□□□ -1.22
CALCOCO2-220ENST00000511816 CCDC82Q8N4S0 544 aa7.44□□□□□ -1.22
CALCOCO2-220ENST00000511816 FAM174AQ8TBP5 190 aa7.44□□□□□ -1.22
CALCOCO2-220ENST00000511816 GLMNQ92990 594 aa7.44□□□□□ -1.22
CALCOCO2-220ENST00000511816 VAC14Q08AM6 782 aa7.43□□□□□ -1.22
CALCOCO2-220ENST00000511816 PKDCCQ504Y2 493 aa7.43□□□□□ -1.22
CALCOCO2-220ENST00000511816 PDXDC2PQ6P474 469 aa7.43□□□□□ -1.22
CALCOCO2-220ENST00000511816 HDGFL1Q5TGJ6 251 aa7.42□□□□□ -1.22
CALCOCO2-220ENST00000511816 SNIP1Q8TAD8 396 aaKnown RBP7.42□□□□□ -1.22
CALCOCO2-220ENST00000511816 MRGPRX2Q96LB1 330 aa7.42□□□□□ -1.22
CALCOCO2-220ENST00000511816 ARHGAP9Q9BRR9 750 aa7.42□□□□□ -1.22
CALCOCO2-220ENST00000511816 MAGEB6P1A0A0J9YX57 407 aa7.41□□□□□ -1.22
CALCOCO2-220ENST00000511816 GDF9O60383 454 aa7.41□□□□□ -1.22
CALCOCO2-220ENST00000511816 SKOR1P84550 965 aa7.41□□□□□ -1.22
CALCOCO2-220ENST00000511816 Q6ZNB5 142 aa7.41□□□□□ -1.22
CALCOCO2-220ENST00000511816 ZBTB33Q86T24 672 aa7.41□□□□□ -1.22
CALCOCO2-220ENST00000511816 C1orf115Q9H7X2 142 aa7.41□□□□□ -1.22
CALCOCO2-220ENST00000511816 WASF2Q9Y6W5 498 aa7.41□□□□□ -1.22
CALCOCO2-220ENST00000511816 PKD2L1Q9P0L9 805 aa7.4□□□□□ -1.22
CALCOCO2-220ENST00000511816 FAM187AA6NFU0 413 aa7.39□□□□□ -1.23
CALCOCO2-220ENST00000511816 POM121CA8CG34 1229 aa7.39□□□□□ -1.23
CALCOCO2-220ENST00000511816 ARID5BQ14865 1188 aa7.39□□□□□ -1.23
CALCOCO2-220ENST00000511816 CARD14Q9BXL6 1004 aa7.39□□□□□ -1.23
CALCOCO2-220ENST00000511816 DGAT1O75907 488 aa7.38□□□□□ -1.23
CALCOCO2-220ENST00000511816 ALDH1A1P00352 501 aa7.38□□□□□ -1.23
CALCOCO2-220ENST00000511816 FBXO45P0C2W1 286 aa7.38□□□□□ -1.23
CALCOCO2-220ENST00000511816 TRIM67Q6ZTA4 783 aa7.38□□□□□ -1.23
CALCOCO2-220ENST00000511816 FOXJ1Q92949 421 aa7.38□□□□□ -1.23
CALCOCO2-220ENST00000511816 SLC10A4Q96EP9 437 aa7.38□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms