RNA–Protein interactions for RNA: ENST00000511661.2

LINC01948-202, Transcript of long intergenic non-protein coding RNA 1948, humanhuman

TSL 4

Gene LINC01948, Length 578 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01948-202ENST00000511661 ROCK2O75116 1388 aaKnown RBP13.47□□□□□ -0.25
LINC01948-202ENST00000511661 CARD11Q9BXL7 1154 aa13.47□□□□□ -0.25
LINC01948-202ENST00000511661 POLR3AO14802 1390 aaPredicted RBP13.46□□□□□ -0.25
LINC01948-202ENST00000511661 CABLES1Q8TDN4 633 aa13.46□□□□□ -0.25
LINC01948-202ENST00000511661 CCDC61Q9Y6R9 512 aa13.46□□□□□ -0.25
LINC01948-202ENST00000511661 RALGAPBQ86X10 1494 aa13.45□□□□□ -0.26
LINC01948-202ENST00000511661 UNC5CLQ8IV45 518 aa13.45□□□□□ -0.26
LINC01948-202ENST00000511661 COL14A1Q05707 1796 aaKnown RBP13.45□□□□□ -0.26
LINC01948-202ENST00000511661 PHRF1Q9P1Y6 1649 aaKnown RBP13.44□□□□□ -0.26
LINC01948-202ENST00000511661 PLEKHG3A1L390 1219 aa13.44□□□□□ -0.26
LINC01948-202ENST00000511661 UPF1Q92900 1129 aaKnown RBP eCLIP13.44□□□□□ -0.26
LINC01948-202ENST00000511661 GLI3P10071 1580 aa13.44□□□□□ -0.26
LINC01948-202ENST00000511661 NRAPQ86VF7 1730 aa13.44□□□□□ -0.26
LINC01948-202ENST00000511661 SRPK2P78362 688 aaKnown RBP13.43□□□□□ -0.26
LINC01948-202ENST00000511661 GJD4Q96KN9 370 aaPredicted RBP13.43□□□□□ -0.26
LINC01948-202ENST00000511661 ACEP12821 1306 aa13.42□□□□□ -0.26
LINC01948-202ENST00000511661 PPIP5K1Q6PFW1 1433 aa13.42□□□□□ -0.26
LINC01948-202ENST00000511661 PAK3O75914 559 aaPredicted RBP13.42□□□□□ -0.26
LINC01948-202ENST00000511661 PLEKHG5O94827 1062 aa13.42□□□□□ -0.26
LINC01948-202ENST00000511661 ATAD2Q6PL18 1390 aa13.41□□□□□ -0.26
LINC01948-202ENST00000511661 EVC2Q86UK5 1308 aa13.4□□□□□ -0.26
LINC01948-202ENST00000511661 VPS72Q15906 364 aa13.4□□□□□ -0.26
LINC01948-202ENST00000511661 CABP2Q9NPB3 220 aa13.4□□□□□ -0.26
LINC01948-202ENST00000511661 BRWD3Q6RI45 1802 aa13.4□□□□□ -0.26
LINC01948-202ENST00000511661 BRD4O60885 1362 aaPredicted RBP13.4□□□□□ -0.26
LINC01948-202ENST00000511661 FAM83GA6ND36 823 aa13.39□□□□□ -0.27
LINC01948-202ENST00000511661 SLC24A1O60721 1099 aa13.39□□□□□ -0.27
LINC01948-202ENST00000511661 EIF4G2P78344 907 aaKnown RBP eCLIP13.39□□□□□ -0.27
LINC01948-202ENST00000511661 AKAP12Q02952 1782 aa13.38□□□□□ -0.27
LINC01948-202ENST00000511661 NRKQ7Z2Y5 1582 aa13.38□□□□□ -0.27
LINC01948-202ENST00000511661 SBNO2Q9Y2G9 1366 aa13.38□□□□□ -0.27
LINC01948-202ENST00000511661 EP400Q96L91 3159 aa13.36□□□□□ -0.27
LINC01948-202ENST00000511661 USP47Q96K76 1375 aa13.36□□□□□ -0.27
LINC01948-202ENST00000511661 ST20-MTHFSA0A0A6YYL1 179 aa13.36□□□□□ -0.27
LINC01948-202ENST00000511661 PRDM11Q9NQV5 511 aa13.36□□□□□ -0.27
LINC01948-202ENST00000511661 BTG4Q9NY30 223 aa13.36□□□□□ -0.27
LINC01948-202ENST00000511661 USP6P35125 1406 aa13.36□□□□□ -0.27
LINC01948-202ENST00000511661 ABTB2Q8N961 1025 aa13.35□□□□□ -0.27
LINC01948-202ENST00000511661 CABP1Q9NZU7 370 aa13.35□□□□□ -0.27
LINC01948-202ENST00000511661 USP19O94966 1318 aa13.35□□□□□ -0.27
LINC01948-202ENST00000511661 KIAA0232Q92628 1395 aa13.34□□□□□ -0.27
LINC01948-202ENST00000511661 HSPA5P11021 654 aaKnown RBP13.34□□□□□ -0.27
LINC01948-202ENST00000511661 NUTM2GQ5VZR2 741 aa13.34□□□□□ -0.27
LINC01948-202ENST00000511661 CCDC9Q9Y3X0 531 aaKnown RBP13.34□□□□□ -0.27
LINC01948-202ENST00000511661 PIK3C2AO00443 1686 aa13.34□□□□□ -0.27
LINC01948-202ENST00000511661 MON2Q7Z3U7 1717 aa13.33□□□□□ -0.27
LINC01948-202ENST00000511661 ONECUT3O60422 494 aaPredicted RBP13.33□□□□□ -0.28
LINC01948-202ENST00000511661 NLRP13Q86W25 1043 aa13.33□□□□□ -0.28
LINC01948-202ENST00000511661 LMO7Q8WWI1 1683 aa13.33□□□□□ -0.28
LINC01948-202ENST00000511661 CPDO75976 1380 aa13.32□□□□□ -0.28
LINC01948-202ENST00000511661 SSH2Q76I76 1423 aa13.32□□□□□ -0.28
LINC01948-202ENST00000511661 SEPT12Q8IYM1 358 aa13.32□□□□□ -0.28
LINC01948-202ENST00000511661 SLIT3O75094 1523 aa13.32□□□□□ -0.28
LINC01948-202ENST00000511661 THSD7AQ9UPZ6 1657 aa13.31□□□□□ -0.28
LINC01948-202ENST00000511661 TESK2Q96S53 571 aa13.31□□□□□ -0.28
LINC01948-202ENST00000511661 SPATA31A5Q5VU36 1347 aa13.31□□□□□ -0.28
LINC01948-202ENST00000511661 SPATA31A7Q8IWB4 1347 aa13.31□□□□□ -0.28
LINC01948-202ENST00000511661 CPSF1Q10570 1443 aaKnown RBP13.3□□□□□ -0.28
LINC01948-202ENST00000511661 ZC3H6P61129 1189 aaKnown RBP13.3□□□□□ -0.28
LINC01948-202ENST00000511661 CCDC125Q86Z20 511 aa13.3□□□□□ -0.28
LINC01948-202ENST00000511661 ZNF692Q9BU19 519 aaPredicted RBP13.3□□□□□ -0.28
LINC01948-202ENST00000511661 TMF1P82094 1093 aa13.29□□□□□ -0.28
LINC01948-202ENST00000511661 CHRNA2Q15822 529 aa13.29□□□□□ -0.28
LINC01948-202ENST00000511661 USP54Q70EL1 1684 aa13.28□□□□□ -0.28
LINC01948-202ENST00000511661 CAMTA1Q9Y6Y1 1673 aa13.28□□□□□ -0.28
LINC01948-202ENST00000511661 GCP02774 474 aa13.28□□□□□ -0.28
LINC01948-202ENST00000511661 NLRP6P59044 892 aa13.28□□□□□ -0.28
LINC01948-202ENST00000511661 FAM98CQ17RN3 349 aaKnown RBP13.28□□□□□ -0.28
LINC01948-202ENST00000511661 CDCA8Q53HL2 280 aa13.28□□□□□ -0.28
LINC01948-202ENST00000511661 KRT27Q7Z3Y8 459 aa13.28□□□□□ -0.28
LINC01948-202ENST00000511661 PUS7Q96PZ0 661 aaKnown RBP13.28□□□□□ -0.28
LINC01948-202ENST00000511661 TTC21AQ8NDW8 1320 aa13.28□□□□□ -0.28
LINC01948-202ENST00000511661 BLMP54132 1417 aaPredicted RBP13.28□□□□□ -0.28
LINC01948-202ENST00000511661 A0A0G2JS52 829 aa13.27□□□□□ -0.29
LINC01948-202ENST00000511661 MYT1Q01538 1121 aa13.27□□□□□ -0.29
LINC01948-202ENST00000511661 SPATA31A1Q5TZJ5 1347 aa13.27□□□□□ -0.29
LINC01948-202ENST00000511661 TTC21BQ7Z4L5 1316 aa13.27□□□□□ -0.29
LINC01948-202ENST00000511661 KTN1Q86UP2 1357 aaKnown RBP13.27□□□□□ -0.29
LINC01948-202ENST00000511661 COL18A1P39060 1754 aa13.27□□□□□ -0.29
LINC01948-202ENST00000511661 CD163L1Q9NR16 1453 aa13.26□□□□□ -0.29
LINC01948-202ENST00000511661 STRN4Q9NRL3 753 aa13.26□□□□□ -0.29
LINC01948-202ENST00000511661 RGPD1P0DJD0 1748 aa13.25□□□□□ -0.29
LINC01948-202ENST00000511661 COL5A2P05997 1499 aaPredicted RBP13.25□□□□□ -0.29
LINC01948-202ENST00000511661 AATKQ6ZMQ8 1374 aa13.25□□□□□ -0.29
LINC01948-202ENST00000511661 RGPD5Q99666 1765 aa13.25□□□□□ -0.29
LINC01948-202ENST00000511661 EVA1CP58658 441 aa13.24□□□□□ -0.29
LINC01948-202ENST00000511661 NFAT5O94916 1531 aa13.23□□□□□ -0.29
LINC01948-202ENST00000511661 NINLQ9Y2I6 1382 aa13.23□□□□□ -0.29
LINC01948-202ENST00000511661 PARP4Q9UKK3 1724 aaKnown RBP13.23□□□□□ -0.29
LINC01948-202ENST00000511661 KCNH5Q8NCM2 988 aa13.23□□□□□ -0.29
LINC01948-202ENST00000511661 ABCC6O95255 1503 aa13.23□□□□□ -0.29
LINC01948-202ENST00000511661 WNK3Q9BYP7 1800 aa13.23□□□□□ -0.29
LINC01948-202ENST00000511661 LARP1Q6PKG0 1096 aaKnown RBP13.22□□□□□ -0.29
LINC01948-202ENST00000511661 BARGINQ6ZT62 677 aa13.22□□□□□ -0.29
LINC01948-202ENST00000511661 HDGFL2Q7Z4V5 671 aaPredicted RBP13.22□□□□□ -0.29
LINC01948-202ENST00000511661 TMC1Q8TDI8 760 aa13.22□□□□□ -0.29
LINC01948-202ENST00000511661 LTN1O94822 1766 aa13.22□□□□□ -0.29
LINC01948-202ENST00000511661 CRB1P82279 1406 aa13.22□□□□□ -0.29
LINC01948-202ENST00000511661 EDC4Q6P2E9 1401 aaKnown RBP13.22□□□□□ -0.29
LINC01948-202ENST00000511661 USP31Q70CQ4 1352 aa13.21□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 69.4 ms