RNA–Protein interactions for RNA: ENST00000511628.1

CHD1-207, Transcript of chromodomain helicase DNA binding protein 1, humanhuman

TSL 3

Gene CHD1, Length 599 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1-207ENST00000511628 AP1G2O75843 785 aa7.05□□□□□ -1.28
CHD1-207ENST00000511628 DGAT1O75907 488 aa7.05□□□□□ -1.28
CHD1-207ENST00000511628 BAP1Q92560 729 aa7.05□□□□□ -1.28
CHD1-207ENST00000511628 ARMC2Q8NEN0 867 aa7.04□□□□□ -1.28
CHD1-207ENST00000511628 SNIP1Q8TAD8 396 aaKnown RBP7.04□□□□□ -1.28
CHD1-207ENST00000511628 MRGPRX2Q96LB1 330 aa7.04□□□□□ -1.28
CHD1-207ENST00000511628 MAP10Q9P2G4 905 aa7.04□□□□□ -1.28
CHD1-207ENST00000511628 PER1O15534 1290 aaPredicted RBP7.03□□□□□ -1.28
CHD1-207ENST00000511628 CTDSPL2Q05D32 466 aa7.02□□□□□ -1.29
CHD1-207ENST00000511628 WASF2Q9Y6W5 498 aa7.02□□□□□ -1.29
CHD1-207ENST00000511628 ALDH1A1P00352 501 aa7.01□□□□□ -1.29
CHD1-207ENST00000511628 SH3BP2P78314 561 aa7.01□□□□□ -1.29
CHD1-207ENST00000511628 SKOR1P84550 965 aa7.01□□□□□ -1.29
CHD1-207ENST00000511628 NBPF14Q5TI25 921 aa7.01□□□□□ -1.29
CHD1-207ENST00000511628 ZNF511Q8NB15 262 aa7.01□□□□□ -1.29
CHD1-207ENST00000511628 PNMA1Q8ND90 353 aa7.01□□□□□ -1.29
CHD1-207ENST00000511628 GOPCQ9HD26 462 aa7.01□□□□□ -1.29
CHD1-207ENST00000511628 GNL3Q9BVP2 549 aaKnown RBP eCLIP7□□□□□ -1.29
CHD1-207ENST00000511628 TOR4AQ9NXH8 423 aa7□□□□□ -1.29
CHD1-207ENST00000511628 F12P00748 615 aaPredicted RBP6.99□□□□□ -1.29
CHD1-207ENST00000511628 ARID5BQ14865 1188 aa6.99□□□□□ -1.29
CHD1-207ENST00000511628 PPP2R2DQ66LE6 453 aa6.99□□□□□ -1.29
CHD1-207ENST00000511628 FAM174AQ8TBP5 190 aa6.99□□□□□ -1.29
CHD1-207ENST00000511628 VARSP26640 1264 aaKnown RBP6.98□□□□□ -1.29
CHD1-207ENST00000511628 RFC5P40937 340 aa6.98□□□□□ -1.29
CHD1-207ENST00000511628 BPHLQ86WA6 291 aaPredicted RBP6.98□□□□□ -1.29
CHD1-207ENST00000511628 LRRN4Q8WUT4 740 aa6.98□□□□□ -1.29
CHD1-207ENST00000511628 MAGEB6P1A0A0J9YX57 407 aa6.97□□□□□ -1.29
CHD1-207ENST00000511628 J3QL48 77 aa6.97□□□□□ -1.29
CHD1-207ENST00000511628 AXIN1O15169 862 aa6.97□□□□□ -1.29
CHD1-207ENST00000511628 MYT1Q01538 1121 aa6.97□□□□□ -1.29
CHD1-207ENST00000511628 TMEM259Q4ZIN3 620 aa6.97□□□□□ -1.29
CHD1-207ENST00000511628 FOXJ1Q92949 421 aa6.97□□□□□ -1.29
CHD1-207ENST00000511628 USP17L8P0C7I0 530 aa6.96□□□□□ -1.3
CHD1-207ENST00000511628 SMPD1P17405 629 aa6.96□□□□□ -1.3
CHD1-207ENST00000511628 CARD14Q9BXL6 1004 aa6.96□□□□□ -1.3
CHD1-207ENST00000511628 NR6A1Q15406 480 aa6.95□□□□□ -1.3
CHD1-207ENST00000511628 ST8SIA5O15466 376 aa6.94□□□□□ -1.3
CHD1-207ENST00000511628 CTC1Q2NKJ3 1217 aa6.94□□□□□ -1.3
CHD1-207ENST00000511628 ZNF787Q6DD87 383 aa6.94□□□□□ -1.3
CHD1-207ENST00000511628 GPKOWQ92917 476 aaPredicted RBP eCLIP6.94□□□□□ -1.3
CHD1-207ENST00000511628 FKBPLQ9UIM3 349 aa6.94□□□□□ -1.3
CHD1-207ENST00000511628 TLL2Q9Y6L7 1015 aa6.94□□□□□ -1.3
CHD1-207ENST00000511628 ZBTB33Q86T24 672 aa6.93□□□□□ -1.3
CHD1-207ENST00000511628 ARHGAP9Q9BRR9 750 aa6.93□□□□□ -1.3
CHD1-207ENST00000511628 APBB1O00213 710 aa6.92□□□□□ -1.3
CHD1-207ENST00000511628 SIAH2O43255 324 aa6.92□□□□□ -1.3
CHD1-207ENST00000511628 FBXO31Q5XUX0 539 aaPredicted RBP6.92□□□□□ -1.3
CHD1-207ENST00000511628 HPS1Q92902 700 aa6.92□□□□□ -1.3
CHD1-207ENST00000511628 AAASQ9NRG9 546 aa6.92□□□□□ -1.3
CHD1-207ENST00000511628 AVPP01185 164 aa6.91□□□□□ -1.3
CHD1-207ENST00000511628 PTK2Q05397 1052 aa6.91□□□□□ -1.3
CHD1-207ENST00000511628 ZC3H4Q9UPT8 1303 aaKnown RBP6.91□□□□□ -1.3
CHD1-207ENST00000511628 PDXDC2PQ6P474 469 aa6.9□□□□□ -1.3
CHD1-207ENST00000511628 VASH1Q7L8A9 365 aaPredicted RBP6.9□□□□□ -1.3
CHD1-207ENST00000511628 SLC10A4Q96EP9 437 aa6.9□□□□□ -1.3
CHD1-207ENST00000511628 LCE2BO14633 110 aa6.89□□□□□ -1.31
CHD1-207ENST00000511628 CAPN5O15484 640 aaPredicted RBP6.89□□□□□ -1.31
CHD1-207ENST00000511628 ADH1CP00326 375 aa6.89□□□□□ -1.31
CHD1-207ENST00000511628 NNTQ13423 1086 aa6.89□□□□□ -1.31
CHD1-207ENST00000511628 PRM3Q9NNZ6 103 aa6.89□□□□□ -1.31
CHD1-207ENST00000511628 HMX1Q9NP08 348 aaPredicted RBP6.89□□□□□ -1.31
CHD1-207ENST00000511628 SH3BP5LQ7L8J4 393 aa6.88□□□□□ -1.31
CHD1-207ENST00000511628 CRIPAKQ8N1N5 446 aa6.88□□□□□ -1.31
CHD1-207ENST00000511628 MPNDQ8N594 471 aa6.88□□□□□ -1.31
CHD1-207ENST00000511628 EPS8L1Q8TE68 723 aa6.88□□□□□ -1.31
CHD1-207ENST00000511628 C11orf95C9JLR9 678 aaPredicted RBP6.87□□□□□ -1.31
CHD1-207ENST00000511628 FSHRP23945 695 aa6.87□□□□□ -1.31
CHD1-207ENST00000511628 SMCPP49901 116 aaPredicted RBP6.87□□□□□ -1.31
CHD1-207ENST00000511628 WDR4P57081 412 aaKnown RBP6.87□□□□□ -1.31
CHD1-207ENST00000511628 NR5A1Q13285 461 aa6.87□□□□□ -1.31
CHD1-207ENST00000511628 C4orf48Q5BLP8 95 aa6.87□□□□□ -1.31
CHD1-207ENST00000511628 BANK1Q8NDB2 785 aa6.87□□□□□ -1.31
CHD1-207ENST00000511628 ERFEQ4G0M1 354 aa6.86□□□□□ -1.31
CHD1-207ENST00000511628 DZIP3Q86Y13 1208 aaKnown RBP6.86□□□□□ -1.31
CHD1-207ENST00000511628 CDK15Q96Q40 435 aa6.86□□□□□ -1.31
CHD1-207ENST00000511628 SENP2Q9HC62 589 aa6.86□□□□□ -1.31
CHD1-207ENST00000511628 CDV3Q9UKY7 258 aaKnown RBP6.86□□□□□ -1.31
CHD1-207ENST00000511628 GPSM3Q9Y4H4 160 aa6.86□□□□□ -1.31
CHD1-207ENST00000511628 SH3RF1Q7Z6J0 888 aa6.85□□□□□ -1.31
CHD1-207ENST00000511628 ADAM32Q8TC27 787 aa6.85□□□□□ -1.31
CHD1-207ENST00000511628 C1QTNF2Q9BXJ5 285 aa6.85□□□□□ -1.31
CHD1-207ENST00000511628 ATP13A2Q9NQ11 1180 aa6.85□□□□□ -1.31
CHD1-207ENST00000511628 DACH1Q9UI36 760 aa6.85□□□□□ -1.31
CHD1-207ENST00000511628 UPP2O95045 317 aa6.84□□□□□ -1.31
CHD1-207ENST00000511628 ZIC2O95409 532 aaPredicted RBP6.84□□□□□ -1.31
CHD1-207ENST00000511628 RAB15P59190 212 aa6.84□□□□□ -1.31
CHD1-207ENST00000511628 SCARF1Q14162 830 aa6.84□□□□□ -1.31
CHD1-207ENST00000511628 TRMT44Q8IYL2 757 aaKnown RBP6.84□□□□□ -1.31
CHD1-207ENST00000511628 GMPR2Q9P2T1 348 aaKnown RBP6.84□□□□□ -1.31
CHD1-207ENST00000511628 ZNF330Q9Y3S2 320 aaPredicted RBP6.84□□□□□ -1.31
CHD1-207ENST00000511628 MAP4K5Q9Y4K4 846 aa6.84□□□□□ -1.31
CHD1-207ENST00000511628 NDUFB9Q9Y6M9 179 aa6.84□□□□□ -1.31
CHD1-207ENST00000511628 NBPF20Q3BBV1 942 aa6.83□□□□□ -1.32
CHD1-207ENST00000511628 KIFC2Q96AC6 838 aa6.83□□□□□ -1.32
CHD1-207ENST00000511628 KCTD15Q96SI1 283 aaPredicted RBP6.83□□□□□ -1.32
CHD1-207ENST00000511628 PGPEP1Q9NXJ5 209 aa6.83□□□□□ -1.32
CHD1-207ENST00000511628 PCDHB9Q9Y5E1 797 aa6.83□□□□□ -1.32
CHD1-207ENST00000511628 ZBBXA8MT70 800 aa6.82□□□□□ -1.32
CHD1-207ENST00000511628 BMP1P13497 986 aa6.82□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 12.1 ms