RNA–Protein interactions for RNA: ENST00000511604.5

CPNE4-208, Transcript of copine 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CPNE4, Length 2,503 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE4-208ENST00000511604 MYCBPQ99417 103 aaPredicted RBP8.96□□□□□ -0.97
CPNE4-208ENST00000511604 RBM42Q9BTD8 480 aaKnown RBP8.96□□□□□ -0.97
CPNE4-208ENST00000511604 TOPBP1Q92547 1522 aa8.96□□□□□ -0.98
CPNE4-208ENST00000511604 CTIFO43310 598 aaKnown RBP8.96□□□□□ -0.98
CPNE4-208ENST00000511604 NOP2P46087 812 aaKnown RBP8.96□□□□□ -0.98
CPNE4-208ENST00000511604 C14orf37Q86TY3 774 aa8.96□□□□□ -0.98
CPNE4-208ENST00000511604 BANK1Q8NDB2 785 aa8.96□□□□□ -0.98
CPNE4-208ENST00000511604 SNX21Q969T3 373 aa8.96□□□□□ -0.98
CPNE4-208ENST00000511604 RSPH14Q9UHP6 348 aa8.96□□□□□ -0.98
CPNE4-208ENST00000511604 GTF2A1P52655 376 aaPredicted RBP8.95□□□□□ -0.98
CPNE4-208ENST00000511604 DIAPH3Q9NSV4 1193 aa8.95□□□□□ -0.98
CPNE4-208ENST00000511604 MORC2Q9Y6X9 1032 aaPredicted RBP8.95□□□□□ -0.98
CPNE4-208ENST00000511604 GRIN2BQ13224 1484 aa8.95□□□□□ -0.98
CPNE4-208ENST00000511604 RIOK3O14730 519 aaKnown RBP8.95□□□□□ -0.98
CPNE4-208ENST00000511604 BAG4O95429 457 aaKnown RBP8.95□□□□□ -0.98
CPNE4-208ENST00000511604 NCAPGQ9BPX3 1015 aa8.95□□□□□ -0.98
CPNE4-208ENST00000511604 SPTLC3Q9NUV7 552 aa8.95□□□□□ -0.98
CPNE4-208ENST00000511604 ABCC5O15440 1437 aa8.95□□□□□ -0.98
CPNE4-208ENST00000511604 PPP2R1AP30153 589 aa8.94□□□□□ -0.98
CPNE4-208ENST00000511604 BRPF1P55201 1214 aaPredicted RBP8.94□□□□□ -0.98
CPNE4-208ENST00000511604 RAD51AP2Q09MP3 1159 aa8.94□□□□□ -0.98
CPNE4-208ENST00000511604 CT47A1Q5JQC4 288 aaPredicted RBP8.94□□□□□ -0.98
CPNE4-208ENST00000511604 RBM27Q9P2N5 1060 aaKnown RBP8.94□□□□□ -0.98
CPNE4-208ENST00000511604 DNMBPQ6XZF7 1577 aa8.94□□□□□ -0.98
CPNE4-208ENST00000511604 DHX16O60231 1041 aaKnown RBP8.94□□□□□ -0.98
CPNE4-208ENST00000511604 EGFL6Q8IUX8 553 aa8.94□□□□□ -0.98
CPNE4-208ENST00000511604 C17orf53Q8N3J3 647 aaPredicted RBP8.94□□□□□ -0.98
CPNE4-208ENST00000511604 SMC4Q9NTJ3 1288 aa8.94□□□□□ -0.98
CPNE4-208ENST00000511604 E9PCH4 1651 aa8.94□□□□□ -0.98
CPNE4-208ENST00000511604 CGNL1Q0VF96 1302 aa8.94□□□□□ -0.98
CPNE4-208ENST00000511604 RALGAPBQ86X10 1494 aa8.93□□□□□ -0.98
CPNE4-208ENST00000511604 NPC1L1Q9UHC9 1359 aa8.93□□□□□ -0.98
CPNE4-208ENST00000511604 PHF14O94880 888 aa8.93□□□□□ -0.98
CPNE4-208ENST00000511604 SUPT6HQ7KZ85 1726 aaKnown RBP8.93□□□□□ -0.98
CPNE4-208ENST00000511604 DAPK1P53355 1430 aa8.93□□□□□ -0.98
CPNE4-208ENST00000511604 NCBP1Q09161 790 aaKnown RBP8.93□□□□□ -0.98
CPNE4-208ENST00000511604 CHAF1AQ13111 956 aaPredicted RBP8.93□□□□□ -0.98
CPNE4-208ENST00000511604 WDR43Q15061 677 aaKnown RBP eCLIP8.93□□□□□ -0.98
CPNE4-208ENST00000511604 CREBRFQ8IUR6 639 aa8.93□□□□□ -0.98
CPNE4-208ENST00000511604 KRT222Q8N1A0 295 aa8.93□□□□□ -0.98
CPNE4-208ENST00000511604 RAD54L2Q9Y4B4 1467 aa8.93□□□□□ -0.98
CPNE4-208ENST00000511604 HNRNPH2P55795 449 aaKnown RBP8.92□□□□□ -0.98
CPNE4-208ENST00000511604 CTR9Q6PD62 1173 aa8.92□□□□□ -0.98
CPNE4-208ENST00000511604 LRSAM1Q6UWE0 723 aa8.92□□□□□ -0.98
CPNE4-208ENST00000511604 TESK2Q96S53 571 aa8.92□□□□□ -0.98
CPNE4-208ENST00000511604 KIF2CQ99661 725 aa8.92□□□□□ -0.98
CPNE4-208ENST00000511604 CEP83Q9Y592 693 aa8.92□□□□□ -0.98
CPNE4-208ENST00000511604 TARBP1Q13395 1621 aaKnown RBP8.92□□□□□ -0.98
CPNE4-208ENST00000511604 KIF14Q15058 1648 aa8.92□□□□□ -0.98
CPNE4-208ENST00000511604 PKP1Q13835 747 aa8.92□□□□□ -0.98
CPNE4-208ENST00000511604 RGL3Q3MIN7 710 aa8.92□□□□□ -0.98
CPNE4-208ENST00000511604 ICE2Q659A1 982 aa8.92□□□□□ -0.98
CPNE4-208ENST00000511604 GAS2L2Q8NHY3 880 aa8.92□□□□□ -0.98
CPNE4-208ENST00000511604 RASSF4Q9H2L5 321 aa8.92□□□□□ -0.98
CPNE4-208ENST00000511604 KIF18AQ8NI77 898 aa8.91□□□□□ -0.98
CPNE4-208ENST00000511604 TMX1Q9H3N1 280 aa8.91□□□□□ -0.98
CPNE4-208ENST00000511604 LMBRD1Q9NUN5 540 aa8.91□□□□□ -0.98
CPNE4-208ENST00000511604 NSFL1CQ9UNZ2 370 aaKnown RBP8.91□□□□□ -0.98
CPNE4-208ENST00000511604 ERCC6L2Q5T890 1561 aa8.91□□□□□ -0.98
CPNE4-208ENST00000511604 UHRF1BP1Q6BDS2 1440 aa8.91□□□□□ -0.98
CPNE4-208ENST00000511604 SYCP1Q15431 976 aa8.91□□□□□ -0.98
CPNE4-208ENST00000511604 NEUROD2Q15784 382 aa8.91□□□□□ -0.98
CPNE4-208ENST00000511604 MCTP1Q6DN14 999 aa8.91□□□□□ -0.98
CPNE4-208ENST00000511604 NKTRP30414 1462 aaKnown RBP8.9□□□□□ -0.98
CPNE4-208ENST00000511604 GAPVD1Q14C86 1478 aa8.9□□□□□ -0.98
CPNE4-208ENST00000511604 MAGI1Q96QZ7 1491 aaPredicted RBP8.9□□□□□ -0.98
CPNE4-208ENST00000511604 EHBP1L1Q8N3D4 1523 aa8.9□□□□□ -0.98
CPNE4-208ENST00000511604 KIAA0586Q9BVV6 1533 aa8.9□□□□□ -0.98
CPNE4-208ENST00000511604 CCDC172P0C7W6 258 aa8.9□□□□□ -0.98
CPNE4-208ENST00000511604 CEP120Q8N960 986 aa8.9□□□□□ -0.98
CPNE4-208ENST00000511604 RNF214Q8ND24 703 aa8.9□□□□□ -0.98
CPNE4-208ENST00000511604 RRP7AQ9Y3A4 280 aaKnown RBP8.9□□□□□ -0.98
CPNE4-208ENST00000511604 CYP2C19P33261 490 aa8.9□□□□□ -0.99
CPNE4-208ENST00000511604 PDE3AQ14432 1141 aa8.9□□□□□ -0.99
CPNE4-208ENST00000511604 PMFBP1Q8TBY8 1022 aa8.9□□□□□ -0.99
CPNE4-208ENST00000511604 BRMS1Q9HCU9 246 aa8.9□□□□□ -0.99
CPNE4-208ENST00000511604 CDK13Q14004 1512 aaKnown RBP8.9□□□□□ -0.99
CPNE4-208ENST00000511604 SYCE3A1L190 88 aa8.89□□□□□ -0.99
CPNE4-208ENST00000511604 FAM43BQ6ZT52 329 aaPredicted RBP8.89□□□□□ -0.99
CPNE4-208ENST00000511604 TTC12Q9H892 705 aaPredicted RBP8.89□□□□□ -0.99
CPNE4-208ENST00000511604 GUCY2CP25092 1073 aa8.89□□□□□ -0.99
CPNE4-208ENST00000511604 SLC26A8Q96RN1 970 aa8.89□□□□□ -0.99
CPNE4-208ENST00000511604 SATB1Q01826 763 aa8.88□□□□□ -0.99
CPNE4-208ENST00000511604 MCCP23508 829 aa8.88□□□□□ -0.99
CPNE4-208ENST00000511604 RARSP54136 660 aaKnown RBP8.88□□□□□ -0.99
CPNE4-208ENST00000511604 FBLN2P98095 1184 aa8.88□□□□□ -0.99
CPNE4-208ENST00000511604 PLPPR3Q6T4P5 718 aa8.88□□□□□ -0.99
CPNE4-208ENST00000511604 GPT2Q8TD30 523 aa8.88□□□□□ -0.99
CPNE4-208ENST00000511604 TMEM63CQ9P1W3 806 aa8.88□□□□□ -0.99
CPNE4-208ENST00000511604 MAGI2Q86UL8 1455 aa8.87□□□□□ -0.99
CPNE4-208ENST00000511604 K7ELQ4 463 aaPredicted RBP8.87□□□□□ -0.99
CPNE4-208ENST00000511604 CASQ1P31415 396 aa8.87□□□□□ -0.99
CPNE4-208ENST00000511604 HSP90AB3PQ58FF7 597 aa8.87□□□□□ -0.99
CPNE4-208ENST00000511604 GPATCH11Q8N954 259 aa8.87□□□□□ -0.99
CPNE4-208ENST00000511604 FAM53CQ9NYF3 392 aa8.87□□□□□ -0.99
CPNE4-208ENST00000511604 ROCK1Q13464 1354 aa8.86□□□□□ -0.99
CPNE4-208ENST00000511604 REC8O95072 547 aa8.86□□□□□ -0.99
CPNE4-208ENST00000511604 GYS2P54840 703 aa8.86□□□□□ -0.99
CPNE4-208ENST00000511604 ZNF777Q9ULD5 760 aaPredicted RBP8.86□□□□□ -0.99
CPNE4-208ENST00000511604 NBPF20Q3BBV1 942 aa8.86□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 11.2 ms