RNA–Protein interactions for RNA: ENST00000511317.1

DDX60-204, Transcript of DExD/H-box helicase 60, humanhuman

TSL 3

Gene DDX60, Length 618 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX60-204ENST00000511317 ZNF511Q8NB15 262 aa12.5□□□□□ -0.41
DDX60-204ENST00000511317 EHBP1Q8NDI1 1231 aa12.5□□□□□ -0.41
DDX60-204ENST00000511317 GMPR2Q9P2T1 348 aaKnown RBP12.5□□□□□ -0.41
DDX60-204ENST00000511317 ALDH1A1P00352 501 aa12.49□□□□□ -0.41
DDX60-204ENST00000511317 CLK2P49760 499 aaKnown RBP12.49□□□□□ -0.41
DDX60-204ENST00000511317 RTL5Q5HYW3 569 aaPredicted RBP12.49□□□□□ -0.41
DDX60-204ENST00000511317 FBXO31Q5XUX0 539 aaPredicted RBP12.48□□□□□ -0.41
DDX60-204ENST00000511317 KDM4CQ9H3R0 1056 aa12.47□□□□□ -0.41
DDX60-204ENST00000511317 POLR3EQ9NVU0 708 aa12.47□□□□□ -0.41
DDX60-204ENST00000511317 CTHP32929 405 aa12.46□□□□□ -0.41
DDX60-204ENST00000511317 TLL2Q9Y6L7 1015 aa12.46□□□□□ -0.41
DDX60-204ENST00000511317 FAM117AQ9C073 453 aa12.45□□□□□ -0.42
DDX60-204ENST00000511317 NUTM2BA6NNL0 878 aaPredicted RBP12.44□□□□□ -0.42
DDX60-204ENST00000511317 NUTM2EB1AL46 878 aaPredicted RBP12.44□□□□□ -0.42
DDX60-204ENST00000511317 NUTM2DQ5VT03 806 aaPredicted RBP12.44□□□□□ -0.42
DDX60-204ENST00000511317 NUTM2AQ8IVF1 878 aaPredicted RBP12.44□□□□□ -0.42
DDX60-204ENST00000511317 ATP13A2Q9NQ11 1180 aa12.44□□□□□ -0.42
DDX60-204ENST00000511317 PLEKHG3A1L390 1219 aa12.43□□□□□ -0.42
DDX60-204ENST00000511317 FOXJ1Q92949 421 aa12.42□□□□□ -0.42
DDX60-204ENST00000511317 RSPH6AQ9H0K4 717 aa12.42□□□□□ -0.42
DDX60-204ENST00000511317 C4orf48Q5BLP8 95 aa12.41□□□□□ -0.42
DDX60-204ENST00000511317 TSC1Q92574 1164 aa12.41□□□□□ -0.42
DDX60-204ENST00000511317 VARSP26640 1264 aaKnown RBP12.4□□□□□ -0.42
DDX60-204ENST00000511317 C11orf95C9JLR9 678 aaPredicted RBP12.38□□□□□ -0.43
DDX60-204ENST00000511317 SH3D19Q5HYK7 790 aa12.38□□□□□ -0.43
DDX60-204ENST00000511317 LCE2AQ5TA79 106 aaPredicted RBP12.38□□□□□ -0.43
DDX60-204ENST00000511317 MPNDQ8N594 471 aa12.38□□□□□ -0.43
DDX60-204ENST00000511317 PROCA1Q8NCQ7 364 aaPredicted RBP12.38□□□□□ -0.43
DDX60-204ENST00000511317 GNL3Q9BVP2 549 aaKnown RBP eCLIP12.38□□□□□ -0.43
DDX60-204ENST00000511317 SNRPBP14678 240 aaKnown RBP12.37□□□□□ -0.43
DDX60-204ENST00000511317 SKIV2LQ15477 1246 aaKnown RBP12.37□□□□□ -0.43
DDX60-204ENST00000511317 WASF2Q9Y6W5 498 aa12.36□□□□□ -0.43
DDX60-204ENST00000511317 CTDSPL2Q05D32 466 aa12.35□□□□□ -0.43
DDX60-204ENST00000511317 HELBQ8NG08 1087 aaPredicted RBP12.35□□□□□ -0.43
DDX60-204ENST00000511317 TRIM46Q7Z4K8 759 aa12.34□□□□□ -0.43
DDX60-204ENST00000511317 DDRGK1Q96HY6 314 aa12.34□□□□□ -0.43
DDX60-204ENST00000511317 TRIM47Q96LD4 638 aa12.34□□□□□ -0.43
DDX60-204ENST00000511317 BMP1P13497 986 aa12.33□□□□□ -0.44
DDX60-204ENST00000511317 SH3RF1Q7Z6J0 888 aa12.33□□□□□ -0.44
DDX60-204ENST00000511317 CDK15Q96Q40 435 aa12.33□□□□□ -0.44
DDX60-204ENST00000511317 NNTQ13423 1086 aa12.32□□□□□ -0.44
DDX60-204ENST00000511317 PPP2R2DQ66LE6 453 aa12.32□□□□□ -0.44
DDX60-204ENST00000511317 CAPN5O15484 640 aaPredicted RBP12.31□□□□□ -0.44
DDX60-204ENST00000511317 FAM174AQ8TBP5 190 aa12.31□□□□□ -0.44
DDX60-204ENST00000511317 C1QTNF2Q9BXJ5 285 aa12.31□□□□□ -0.44
DDX60-204ENST00000511317 KLF16Q9BXK1 252 aaPredicted RBP12.31□□□□□ -0.44
DDX60-204ENST00000511317 SH3BP5LQ7L8J4 393 aa12.3□□□□□ -0.44
DDX60-204ENST00000511317 LRRN4Q8WUT4 740 aa12.3□□□□□ -0.44
DDX60-204ENST00000511317 ADH1CP00326 375 aa12.29□□□□□ -0.44
DDX60-204ENST00000511317 TREML4Q6UXN2 200 aa12.29□□□□□ -0.44
DDX60-204ENST00000511317 TIMP2P16035 220 aa12.28□□□□□ -0.44
DDX60-204ENST00000511317 GRM5P41594 1212 aa12.28□□□□□ -0.44
DDX60-204ENST00000511317 BPHLQ86WA6 291 aaPredicted RBP12.28□□□□□ -0.44
DDX60-204ENST00000511317 NR3C2P08235 984 aa12.27□□□□□ -0.45
DDX60-204ENST00000511317 LCE2CQ5TA81 110 aa12.27□□□□□ -0.45
DDX60-204ENST00000511317 SENP2Q9HC62 589 aa12.27□□□□□ -0.45
DDX60-204ENST00000511317 NFX1Q12986 1120 aaKnown RBP12.26□□□□□ -0.45
DDX60-204ENST00000511317 ARMC2Q8NEN0 867 aa12.26□□□□□ -0.45
DDX60-204ENST00000511317 AGERQ15109 404 aa12.25□□□□□ -0.45
DDX60-204ENST00000511317 NBPF14Q5TI25 921 aa12.25□□□□□ -0.45
DDX60-204ENST00000511317 ARID5BQ14865 1188 aa12.24□□□□□ -0.45
DDX60-204ENST00000511317 WDR4P57081 412 aaKnown RBP12.23□□□□□ -0.45
DDX60-204ENST00000511317 KIFC2Q96AC6 838 aa12.23□□□□□ -0.45
DDX60-204ENST00000511317 NR6A1Q15406 480 aa12.22□□□□□ -0.45
DDX60-204ENST00000511317 TRMT44Q8IYL2 757 aaKnown RBP12.22□□□□□ -0.45
DDX60-204ENST00000511317 OCSTAMPQ9BR26 566 aa12.21□□□□□ -0.45
DDX60-204ENST00000511317 ZFAND3Q9H8U3 227 aa12.21□□□□□ -0.45
DDX60-204ENST00000511317 MAGEB6P1A0A0J9YX57 407 aa12.2□□□□□ -0.46
DDX60-204ENST00000511317 NR5A1Q13285 461 aa12.2□□□□□ -0.46
DDX60-204ENST00000511317 ERFEQ4G0M1 354 aa12.2□□□□□ -0.46
DDX60-204ENST00000511317 EPS8L1Q8TE68 723 aa12.2□□□□□ -0.46
DDX60-204ENST00000511317 GPKOWQ92917 476 aaPredicted RBP eCLIP12.2□□□□□ -0.46
DDX60-204ENST00000511317 ITPKCQ96DU7 683 aa12.2□□□□□ -0.46
DDX60-204ENST00000511317 HMX1Q9NP08 348 aaPredicted RBP12.2□□□□□ -0.46
DDX60-204ENST00000511317 ZFP42Q96MM3 310 aa12.19□□□□□ -0.46
DDX60-204ENST00000511317 FKBPLQ9UIM3 349 aa12.19□□□□□ -0.46
DDX60-204ENST00000511317 MAP4K5Q9Y4K4 846 aa12.19□□□□□ -0.46
DDX60-204ENST00000511317 AP1G2O75843 785 aa12.18□□□□□ -0.46
DDX60-204ENST00000511317 WFS1O76024 890 aa12.18□□□□□ -0.46
DDX60-204ENST00000511317 CARD14Q9BXL6 1004 aa12.18□□□□□ -0.46
DDX60-204ENST00000511317 ZIC2O95409 532 aaPredicted RBP12.17□□□□□ -0.46
DDX60-204ENST00000511317 RFC5P40937 340 aa12.17□□□□□ -0.46
DDX60-204ENST00000511317 BRPF1P55201 1214 aaPredicted RBP12.17□□□□□ -0.46
DDX60-204ENST00000511317 NEUROD2Q15784 382 aa12.17□□□□□ -0.46
DDX60-204ENST00000511317 MRPL14Q6P1L8 145 aaKnown RBP12.17□□□□□ -0.46
DDX60-204ENST00000511317 PDXDC2PQ6P474 469 aa12.17□□□□□ -0.46
DDX60-204ENST00000511317 GOPCQ9HD26 462 aa12.17□□□□□ -0.46
DDX60-204ENST00000511317 TERTO14746 1132 aaKnown RBP12.16□□□□□ -0.46
DDX60-204ENST00000511317 USP17L8P0C7I0 530 aa12.16□□□□□ -0.46
DDX60-204ENST00000511317 FSHRP23945 695 aa12.16□□□□□ -0.46
DDX60-204ENST00000511317 PURBQ96QR8 312 aaKnown RBP12.14□□□□□ -0.47
DDX60-204ENST00000511317 VASH1Q7L8A9 365 aaPredicted RBP12.13□□□□□ -0.47
DDX60-204ENST00000511317 IL27Q8NEV9 243 aa12.13□□□□□ -0.47
DDX60-204ENST00000511317 ATP1B4Q9UN42 357 aaPredicted RBP12.13□□□□□ -0.47
DDX60-204ENST00000511317 ZC3H4Q9UPT8 1303 aaKnown RBP12.12□□□□□ -0.47
DDX60-204ENST00000511317 ARHGAP9Q9BRR9 750 aa12.12□□□□□ -0.47
DDX60-204ENST00000511317 TRIM34Q9BYJ4 488 aa12.11□□□□□ -0.47
DDX60-204ENST00000511317 MEIOBQ8N635 442 aa12.1□□□□□ -0.47
DDX60-204ENST00000511317 SOBPA7XYQ1 873 aa12.09□□□□□ -0.47
DDX60-204ENST00000511317 CCDC116Q8IYX3 515 aa12.08□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 9.8 ms