RNA–Protein interactions for RNA: ENST00000511067.2

CHD1-206, Transcript of chromodomain helicase DNA binding protein 1, humanhuman

TSL 5

Gene CHD1, Length 817 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1-206ENST00000511067 SOX11P35716 441 aa10.53□□□□□ -0.72
CHD1-206ENST00000511067 MMP16P51512 607 aa10.53□□□□□ -0.72
CHD1-206ENST00000511067 ZPR1O75312 459 aa10.51□□□□□ -0.73
CHD1-206ENST00000511067 ADH1BP00325 375 aa10.51□□□□□ -0.73
CHD1-206ENST00000511067 FAM160A2Q8N612 972 aaPredicted RBP10.51□□□□□ -0.73
CHD1-206ENST00000511067 CCNYL3P0C7X3 344 aa10.5□□□□□ -0.73
CHD1-206ENST00000511067 VAC14Q08AM6 782 aa10.5□□□□□ -0.73
CHD1-206ENST00000511067 FKBPLQ9UIM3 349 aa10.5□□□□□ -0.73
CHD1-206ENST00000511067 HDGFL1Q5TGJ6 251 aa10.49□□□□□ -0.73
CHD1-206ENST00000511067 ADAMTS19Q8TE59 1207 aa10.49□□□□□ -0.73
CHD1-206ENST00000511067 PPP1R18Q6NYC8 613 aa10.48□□□□□ -0.73
CHD1-206ENST00000511067 ARMC2Q8NEN0 867 aa10.48□□□□□ -0.73
CHD1-206ENST00000511067 NKX2-3Q8TAU0 364 aa10.48□□□□□ -0.73
CHD1-206ENST00000511067 NUDT12Q9BQG2 462 aa10.48□□□□□ -0.73
CHD1-206ENST00000511067 IRX2Q9BZI1 471 aaPredicted RBP10.48□□□□□ -0.73
CHD1-206ENST00000511067 ALG2Q9H553 416 aa10.48□□□□□ -0.73
CHD1-206ENST00000511067 GGCXP38435 758 aa10.47□□□□□ -0.73
CHD1-206ENST00000511067 NR1H3Q13133 447 aa10.47□□□□□ -0.73
CHD1-206ENST00000511067 GPKOWQ92917 476 aaPredicted RBP eCLIP10.47□□□□□ -0.73
CHD1-206ENST00000511067 EVA1BQ9NVM1 165 aa10.47□□□□□ -0.73
CHD1-206ENST00000511067 MAP10Q9P2G4 905 aa10.47□□□□□ -0.73
CHD1-206ENST00000511067 TLL1O43897 1013 aa10.46□□□□□ -0.73
CHD1-206ENST00000511067 EIF4G2P78344 907 aaKnown RBP eCLIP10.46□□□□□ -0.73
CHD1-206ENST00000511067 EIF4ENIF1Q9NRA8 985 aaKnown RBP10.46□□□□□ -0.73
CHD1-206ENST00000511067 ZBBXA8MT70 800 aa10.45□□□□□ -0.74
CHD1-206ENST00000511067 PPP1R15AO75807 674 aaPredicted RBP10.45□□□□□ -0.74
CHD1-206ENST00000511067 CTHP32929 405 aa10.45□□□□□ -0.74
CHD1-206ENST00000511067 KCNH2Q12809 1159 aa10.45□□□□□ -0.74
CHD1-206ENST00000511067 PRDM9Q9NQV7 894 aa10.45□□□□□ -0.74
CHD1-206ENST00000511067 GPSM3Q9Y4H4 160 aa10.44□□□□□ -0.74
CHD1-206ENST00000511067 FBXO45P0C2W1 286 aa10.43□□□□□ -0.74
CHD1-206ENST00000511067 SEMA3FQ13275 785 aa10.43□□□□□ -0.74
CHD1-206ENST00000511067 NBPF14Q5TI25 921 aa10.43□□□□□ -0.74
CHD1-206ENST00000511067 ZNF592Q92610 1267 aa10.42□□□□□ -0.74
CHD1-206ENST00000511067 SLC6A16Q9GZN6 736 aa10.42□□□□□ -0.74
CHD1-206ENST00000511067 PDXDC2PQ6P474 469 aa10.41□□□□□ -0.74
CHD1-206ENST00000511067 PRKD2Q9BZL6 878 aa10.41□□□□□ -0.74
CHD1-206ENST00000511067 PPP1R12CQ9BZL4 782 aa10.4□□□□□ -0.74
CHD1-206ENST00000511067 PTK2Q05397 1052 aa10.39□□□□□ -0.75
CHD1-206ENST00000511067 CFAP70Q5T0N1 1121 aa10.38□□□□□ -0.75
CHD1-206ENST00000511067 UCN2Q96RP3 112 aa10.38□□□□□ -0.75
CHD1-206ENST00000511067 MCCD1P59942 119 aaPredicted RBP10.37□□□□□ -0.75
CHD1-206ENST00000511067 PBXIP1Q96AQ6 731 aa10.37□□□□□ -0.75
CHD1-206ENST00000511067 PALM3A6NDB9 673 aaPredicted RBP10.36□□□□□ -0.75
CHD1-206ENST00000511067 PDIA4P13667 645 aaKnown RBP10.36□□□□□ -0.75
CHD1-206ENST00000511067 UNC93B1Q9H1C4 597 aa10.36□□□□□ -0.75
CHD1-206ENST00000511067 V9GY48 417 aaPredicted RBP10.36□□□□□ -0.75
CHD1-206ENST00000511067 NFATC2IPQ8NCF5 419 aa10.35□□□□□ -0.75
CHD1-206ENST00000511067 S1PR4O95977 384 aa10.34□□□□□ -0.75
CHD1-206ENST00000511067 CCDC24Q8N4L8 307 aa10.34□□□□□ -0.75
CHD1-206ENST00000511067 ACIN1Q9UKV3 1341 aaKnown RBP10.33□□□□□ -0.76
CHD1-206ENST00000511067 RNF223E7ERA6 249 aa10.33□□□□□ -0.76
CHD1-206ENST00000511067 SH3BP5LQ7L8J4 393 aa10.33□□□□□ -0.76
CHD1-206ENST00000511067 ATP9BO43861 1147 aa10.32□□□□□ -0.76
CHD1-206ENST00000511067 SRPK2P78362 688 aaKnown RBP10.32□□□□□ -0.76
CHD1-206ENST00000511067 PTCRAQ6ISU1 281 aaPredicted RBP10.32□□□□□ -0.76
CHD1-206ENST00000511067 OCSTAMPQ9BR26 566 aa10.32□□□□□ -0.76
CHD1-206ENST00000511067 ARHGAP9Q9BRR9 750 aa10.32□□□□□ -0.76
CHD1-206ENST00000511067 TRAIPQ9BWF2 469 aa10.32□□□□□ -0.76
CHD1-206ENST00000511067 TFIP11Q9UBB9 837 aaKnown RBP10.32□□□□□ -0.76
CHD1-206ENST00000511067 MAFBQ9Y5Q3 323 aaPredicted RBP10.32□□□□□ -0.76
CHD1-206ENST00000511067 PDE4CQ08493 712 aa10.31□□□□□ -0.76
CHD1-206ENST00000511067 FCF1Q9Y324 198 aaKnown RBP10.31□□□□□ -0.76
CHD1-206ENST00000511067 LMOD1P29536 600 aaPredicted RBP10.3□□□□□ -0.76
CHD1-206ENST00000511067 LAPTM4AQ15012 233 aa10.3□□□□□ -0.76
CHD1-206ENST00000511067 Q6ZNB5 142 aa10.3□□□□□ -0.76
CHD1-206ENST00000511067 ANKLE1Q8NAG6 615 aa10.3□□□□□ -0.76
CHD1-206ENST00000511067 RETREG2Q8NC44 543 aa10.3□□□□□ -0.76
CHD1-206ENST00000511067 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP10.29□□□□□ -0.76
CHD1-206ENST00000511067 PPEF1O14829 653 aaPredicted RBP10.29□□□□□ -0.76
CHD1-206ENST00000511067 GFRA3O60609 400 aa10.29□□□□□ -0.76
CHD1-206ENST00000511067 RFX1P22670 979 aa10.29□□□□□ -0.76
CHD1-206ENST00000511067 TBC1D9Q6ZT07 1266 aa10.29□□□□□ -0.76
CHD1-206ENST00000511067 SH3RF1Q7Z6J0 888 aa10.29□□□□□ -0.76
CHD1-206ENST00000511067 ZBTB33Q86T24 672 aa10.29□□□□□ -0.76
CHD1-206ENST00000511067 ADAM32Q8TC27 787 aa10.29□□□□□ -0.76
CHD1-206ENST00000511067 PCDHB9Q9Y5E1 797 aa10.29□□□□□ -0.76
CHD1-206ENST00000511067 BPHLQ86WA6 291 aaPredicted RBP10.28□□□□□ -0.76
CHD1-206ENST00000511067 SLC19A1P41440 591 aa10.27□□□□□ -0.77
CHD1-206ENST00000511067 PLEKHM2Q8IWE5 1019 aa10.27□□□□□ -0.77
CHD1-206ENST00000511067 CEP126Q9P2H0 1117 aa10.27□□□□□ -0.77
CHD1-206ENST00000511067 SLFNL1Q499Z3 407 aa10.26□□□□□ -0.77
CHD1-206ENST00000511067 ZNF511Q8NB15 262 aa10.26□□□□□ -0.77
CHD1-206ENST00000511067 BAP1Q92560 729 aa10.26□□□□□ -0.77
CHD1-206ENST00000511067 USTQ9Y2C2 406 aa10.26□□□□□ -0.77
CHD1-206ENST00000511067 PIK3CDO00329 1044 aa10.25□□□□□ -0.77
CHD1-206ENST00000511067 ATG7O95352 703 aa10.25□□□□□ -0.77
CHD1-206ENST00000511067 LZTS3O60299 673 aaPredicted RBP10.24□□□□□ -0.77
CHD1-206ENST00000511067 USP17L3A6NCW0 530 aa10.23□□□□□ -0.77
CHD1-206ENST00000511067 USP17L4A6NCW7 530 aa10.23□□□□□ -0.77
CHD1-206ENST00000511067 USP17L5A8MUK1 530 aa10.23□□□□□ -0.77
CHD1-206ENST00000511067 NRG2O14511 850 aaPredicted RBP10.23□□□□□ -0.77
CHD1-206ENST00000511067 CSB-PGBD3P0DP91 1061 aa10.23□□□□□ -0.77
CHD1-206ENST00000511067 SKIP12755 728 aa10.23□□□□□ -0.77
CHD1-206ENST00000511067 USP17L2Q6R6M4 530 aa10.23□□□□□ -0.77
CHD1-206ENST00000511067 USP17L1Q7RTZ2 530 aa10.23□□□□□ -0.77
CHD1-206ENST00000511067 DZIP3Q86Y13 1208 aaKnown RBP10.23□□□□□ -0.77
CHD1-206ENST00000511067 RNF135Q8IUD6 432 aa10.23□□□□□ -0.77
CHD1-206ENST00000511067 PHTF2Q8N3S3 785 aa10.23□□□□□ -0.77
CHD1-206ENST00000511067 FAM174AQ8TBP5 190 aa10.23□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 75.9 ms