RNA–Protein interactions for RNA: ENST00000510982.5

PDGFC-206, Transcript of platelet derived growth factor C, humanhuman

TSL 5

Gene PDGFC, Length 524 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFC-206ENST00000510982 NBPF8Q3BBV2 869 aa12.52□□□□□ -0.41
PDGFC-206ENST00000510982 NUTM2GQ5VZR2 741 aa12.52□□□□□ -0.41
PDGFC-206ENST00000510982 DEFB132Q7Z7B7 95 aa12.51□□□□□ -0.41
PDGFC-206ENST00000510982 ACEP12821 1306 aa12.51□□□□□ -0.41
PDGFC-206ENST00000510982 PLEKHG3A1L390 1219 aa12.5□□□□□ -0.41
PDGFC-206ENST00000510982 SRPK2P78362 688 aaKnown RBP12.5□□□□□ -0.41
PDGFC-206ENST00000510982 BLMP54132 1417 aaPredicted RBP12.5□□□□□ -0.41
PDGFC-206ENST00000510982 TRPM3Q9HCF6 1732 aaPredicted RBP12.49□□□□□ -0.41
PDGFC-206ENST00000510982 NWD2Q9ULI1 1742 aa12.49□□□□□ -0.41
PDGFC-206ENST00000510982 ZC3H6P61129 1189 aaKnown RBP12.49□□□□□ -0.41
PDGFC-206ENST00000510982 CHRNA2Q15822 529 aa12.49□□□□□ -0.41
PDGFC-206ENST00000510982 ABTB2Q8N961 1025 aa12.49□□□□□ -0.41
PDGFC-206ENST00000510982 L3MBTL2Q969R5 705 aa12.49□□□□□ -0.41
PDGFC-206ENST00000510982 PLCH1Q4KWH8 1693 aa12.48□□□□□ -0.41
PDGFC-206ENST00000510982 SPATA31A5Q5VU36 1347 aa12.48□□□□□ -0.41
PDGFC-206ENST00000510982 SPATA31A7Q8IWB4 1347 aa12.48□□□□□ -0.41
PDGFC-206ENST00000510982 CENPJQ9HC77 1338 aaPredicted RBP12.48□□□□□ -0.41
PDGFC-206ENST00000510982 EVA1CP58658 441 aa12.48□□□□□ -0.41
PDGFC-206ENST00000510982 SIN3AQ96ST3 1273 aa12.48□□□□□ -0.41
PDGFC-206ENST00000510982 CABP2Q9NPB3 220 aa12.48□□□□□ -0.41
PDGFC-206ENST00000510982 STRN4Q9NRL3 753 aa12.48□□□□□ -0.41
PDGFC-206ENST00000510982 BRWD3Q6RI45 1802 aa12.48□□□□□ -0.41
PDGFC-206ENST00000510982 ARHGEF28Q8N1W1 1705 aaKnown RBP12.48□□□□□ -0.41
PDGFC-206ENST00000510982 ALS2Q96Q42 1657 aa12.48□□□□□ -0.41
PDGFC-206ENST00000510982 ATP7BP35670 1465 aa12.47□□□□□ -0.41
PDGFC-206ENST00000510982 KIAA0232Q92628 1395 aa12.47□□□□□ -0.41
PDGFC-206ENST00000510982 NEUROD1Q13562 356 aa12.47□□□□□ -0.41
PDGFC-206ENST00000510982 POLR3AO14802 1390 aaPredicted RBP12.46□□□□□ -0.41
PDGFC-206ENST00000510982 ABCA3Q99758 1704 aa12.46□□□□□ -0.41
PDGFC-206ENST00000510982 MSH5O43196 834 aa12.46□□□□□ -0.41
PDGFC-206ENST00000510982 BAG6P46379 1132 aa12.45□□□□□ -0.42
PDGFC-206ENST00000510982 FAM182BQ5T319 152 aa12.45□□□□□ -0.42
PDGFC-206ENST00000510982 NLRP13Q86W25 1043 aa12.45□□□□□ -0.42
PDGFC-206ENST00000510982 CABP1Q9NZU7 370 aa12.45□□□□□ -0.42
PDGFC-206ENST00000510982 USP35Q9P2H5 1018 aa12.45□□□□□ -0.42
PDGFC-206ENST00000510982 COL14A1Q05707 1796 aaKnown RBP12.45□□□□□ -0.42
PDGFC-206ENST00000510982 SPATA31A1Q5TZJ5 1347 aa12.44□□□□□ -0.42
PDGFC-206ENST00000510982 ITSN1Q15811 1721 aa12.44□□□□□ -0.42
PDGFC-206ENST00000510982 KIAA1210Q9ULL0 1709 aa12.44□□□□□ -0.42
PDGFC-206ENST00000510982 EP400Q96L91 3159 aa12.43□□□□□ -0.42
PDGFC-206ENST00000510982 PPIP5K1Q6PFW1 1433 aa12.43□□□□□ -0.42
PDGFC-206ENST00000510982 GCP02774 474 aa12.42□□□□□ -0.42
PDGFC-206ENST00000510982 EN1Q05925 392 aaPredicted RBP12.42□□□□□ -0.42
PDGFC-206ENST00000510982 NRAPQ86VF7 1730 aa12.42□□□□□ -0.42
PDGFC-206ENST00000510982 EVC2Q86UK5 1308 aa12.41□□□□□ -0.42
PDGFC-206ENST00000510982 NLRP6P59044 892 aa12.41□□□□□ -0.42
PDGFC-206ENST00000510982 FAM196AQ6ZSG2 479 aa12.41□□□□□ -0.42
PDGFC-206ENST00000510982 ZBTB7CA1YPR0 619 aa12.4□□□□□ -0.42
PDGFC-206ENST00000510982 PDE3BQ13370 1112 aa12.4□□□□□ -0.42
PDGFC-206ENST00000510982 LARP1Q6PKG0 1096 aaKnown RBP12.4□□□□□ -0.42
PDGFC-206ENST00000510982 TRIM37O94972 964 aa12.39□□□□□ -0.43
PDGFC-206ENST00000510982 BARGINQ6ZT62 677 aa12.39□□□□□ -0.43
PDGFC-206ENST00000510982 TCP11L2Q8N4U5 519 aa12.39□□□□□ -0.43
PDGFC-206ENST00000510982 CRYBG1Q9Y4K1 1723 aa12.39□□□□□ -0.43
PDGFC-206ENST00000510982 USP19O94966 1318 aa12.38□□□□□ -0.43
PDGFC-206ENST00000510982 PSDA5PKW4 1024 aaPredicted RBP12.38□□□□□ -0.43
PDGFC-206ENST00000510982 ZNF692Q9BU19 519 aaPredicted RBP12.38□□□□□ -0.43
PDGFC-206ENST00000510982 BRD4O60885 1362 aaPredicted RBP12.38□□□□□ -0.43
PDGFC-206ENST00000510982 ROCK2O75116 1388 aaKnown RBP12.38□□□□□ -0.43
PDGFC-206ENST00000510982 CPDO75976 1380 aa12.38□□□□□ -0.43
PDGFC-206ENST00000510982 TOPAZ1Q8N9V7 1692 aa12.37□□□□□ -0.43
PDGFC-206ENST00000510982 SSH2Q76I76 1423 aa12.37□□□□□ -0.43
PDGFC-206ENST00000510982 CAMTA1Q9Y6Y1 1673 aa12.36□□□□□ -0.43
PDGFC-206ENST00000510982 APBA3O96018 575 aa12.36□□□□□ -0.43
PDGFC-206ENST00000510982 EZH2Q15910 746 aaKnown RBP12.36□□□□□ -0.43
PDGFC-206ENST00000510982 THRAP3Q9Y2W1 955 aaKnown RBP12.36□□□□□ -0.43
PDGFC-206ENST00000510982 PHRF1Q9P1Y6 1649 aaKnown RBP12.36□□□□□ -0.43
PDGFC-206ENST00000510982 USP6P35125 1406 aa12.36□□□□□ -0.43
PDGFC-206ENST00000510982 TOM1L2Q6ZVM7 507 aa12.34□□□□□ -0.43
PDGFC-206ENST00000510982 CAMKK2Q96RR4 588 aa12.34□□□□□ -0.43
PDGFC-206ENST00000510982 QRICH2Q9H0J4 1663 aa12.34□□□□□ -0.43
PDGFC-206ENST00000510982 THSD7AQ9UPZ6 1657 aa12.34□□□□□ -0.43
PDGFC-206ENST00000510982 TTC21BQ7Z4L5 1316 aa12.34□□□□□ -0.43
PDGFC-206ENST00000510982 SOX12O15370 315 aa12.33□□□□□ -0.44
PDGFC-206ENST00000510982 R3HDM1Q15032 1099 aaKnown RBP12.33□□□□□ -0.44
PDGFC-206ENST00000510982 CARD11Q9BXL7 1154 aa12.33□□□□□ -0.44
PDGFC-206ENST00000510982 SRCAPQ6ZRS2 3230 aa12.33□□□□□ -0.44
PDGFC-206ENST00000510982 AATKQ6ZMQ8 1374 aa12.32□□□□□ -0.44
PDGFC-206ENST00000510982 NRKQ7Z2Y5 1582 aa12.32□□□□□ -0.44
PDGFC-206ENST00000510982 KCNH5Q8NCM2 988 aa12.32□□□□□ -0.44
PDGFC-206ENST00000510982 AXIN2Q9Y2T1 843 aa12.32□□□□□ -0.44
PDGFC-206ENST00000510982 TRPM1Q7Z4N2 1603 aa12.31□□□□□ -0.44
PDGFC-206ENST00000510982 ARHGEF25Q86VW2 580 aa12.31□□□□□ -0.44
PDGFC-206ENST00000510982 TMC1Q8TDI8 760 aa12.31□□□□□ -0.44
PDGFC-206ENST00000510982 TTC21AQ8NDW8 1320 aa12.31□□□□□ -0.44
PDGFC-206ENST00000510982 RGPD1P0DJD0 1748 aa12.31□□□□□ -0.44
PDGFC-206ENST00000510982 DISP2A7MBM2 1401 aa12.3□□□□□ -0.44
PDGFC-206ENST00000510982 CRB1P82279 1406 aa12.3□□□□□ -0.44
PDGFC-206ENST00000510982 COL5A2P05997 1499 aaPredicted RBP12.3□□□□□ -0.44
PDGFC-206ENST00000510982 C11orf95C9JLR9 678 aaPredicted RBP12.3□□□□□ -0.44
PDGFC-206ENST00000510982 CSB-PGBD3P0DP91 1061 aa12.3□□□□□ -0.44
PDGFC-206ENST00000510982 DDB1Q16531 1140 aa12.3□□□□□ -0.44
PDGFC-206ENST00000510982 SUGP2Q8IX01 1082 aaKnown RBP eCLIP12.3□□□□□ -0.44
PDGFC-206ENST00000510982 KTN1Q86UP2 1357 aaKnown RBP12.3□□□□□ -0.44
PDGFC-206ENST00000510982 LMO7Q8WWI1 1683 aa12.29□□□□□ -0.44
PDGFC-206ENST00000510982 NBPF14Q5TI25 921 aa12.29□□□□□ -0.44
PDGFC-206ENST00000510982 SLC12A5Q9H2X9 1139 aa12.28□□□□□ -0.44
PDGFC-206ENST00000510982 WDR17Q8IZU2 1322 aa12.28□□□□□ -0.44
PDGFC-206ENST00000510982 TONSLQ96HA7 1378 aa12.28□□□□□ -0.44
PDGFC-206ENST00000510982 HDGFL2Q7Z4V5 671 aaPredicted RBP12.27□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms