RNA–Protein interactions for RNA: ENST00000510474.5

NEK11-208, Transcript of NIMA related kinase 11, humanhuman

TSL 2

Gene NEK11, Length 2,337 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK11-208ENST00000510474 PTPRUQ92729 1446 aa11.32□□□□□ -0.6
NEK11-208ENST00000510474 PIK3R4Q99570 1358 aa11.32□□□□□ -0.6
NEK11-208ENST00000510474 AKAP12Q02952 1782 aa11.32□□□□□ -0.6
NEK11-208ENST00000510474 TOPAZ1Q8N9V7 1692 aa11.32□□□□□ -0.6
NEK11-208ENST00000510474 RBM10P98175 930 aaKnown RBP11.32□□□□□ -0.6
NEK11-208ENST00000510474 RSPH6AQ9H0K4 717 aa11.32□□□□□ -0.6
NEK11-208ENST00000510474 CFAP53Q96M91 514 aa11.31□□□□□ -0.6
NEK11-208ENST00000510474 EDC4Q6P2E9 1401 aaKnown RBP11.31□□□□□ -0.6
NEK11-208ENST00000510474 NGEFQ8N5V2 710 aa11.31□□□□□ -0.6
NEK11-208ENST00000510474 SLC26A8Q96RN1 970 aa11.31□□□□□ -0.6
NEK11-208ENST00000510474 RNF123Q5XPI4 1314 aa11.3□□□□□ -0.6
NEK11-208ENST00000510474 CCDC61Q9Y6R9 512 aa11.3□□□□□ -0.6
NEK11-208ENST00000510474 FYB1O15117 783 aa11.3□□□□□ -0.6
NEK11-208ENST00000510474 NUDT16Q96DE0 195 aaKnown RBP11.3□□□□□ -0.6
NEK11-208ENST00000510474 TNNT2P45379 298 aaPredicted RBP11.29□□□□□ -0.6
NEK11-208ENST00000510474 MTHFSP49914 203 aa11.29□□□□□ -0.6
NEK11-208ENST00000510474 SENP3-EIF4A1A0A087X0R7 540 aa11.29□□□□□ -0.6
NEK11-208ENST00000510474 GGNBP2Q9H3C7 697 aa11.29□□□□□ -0.6
NEK11-208ENST00000510474 AMOTL2Q9Y2J4 779 aa11.28□□□□□ -0.6
NEK11-208ENST00000510474 ZNF521Q96K83 1311 aa11.28□□□□□ -0.6
NEK11-208ENST00000510474 NRKQ7Z2Y5 1582 aa11.27□□□□□ -0.61
NEK11-208ENST00000510474 COL3A1P02461 1466 aaPredicted RBP11.27□□□□□ -0.61
NEK11-208ENST00000510474 ANKLE2Q86XL3 938 aa11.26□□□□□ -0.61
NEK11-208ENST00000510474 ZNF692Q9BU19 519 aaPredicted RBP11.26□□□□□ -0.61
NEK11-208ENST00000510474 PRR36Q9H6K5 1346 aa11.26□□□□□ -0.61
NEK11-208ENST00000510474 CHD2O14647 1828 aaKnown RBP11.26□□□□□ -0.61
NEK11-208ENST00000510474 BRD2P25440 801 aaKnown RBP11.26□□□□□ -0.61
NEK11-208ENST00000510474 CHMP4AQ9BY43 222 aa11.26□□□□□ -0.61
NEK11-208ENST00000510474 IQSEC2Q5JU85 1478 aa11.26□□□□□ -0.61
NEK11-208ENST00000510474 MSH5O43196 834 aa11.25□□□□□ -0.61
NEK11-208ENST00000510474 NPM2Q86SE8 214 aaKnown RBP11.25□□□□□ -0.61
NEK11-208ENST00000510474 CCDC146Q8IYE0 955 aa11.25□□□□□ -0.61
NEK11-208ENST00000510474 PNPLA6Q8IY17 1366 aa11.24□□□□□ -0.61
NEK11-208ENST00000510474 APAF1O14727 1248 aa11.24□□□□□ -0.61
NEK11-208ENST00000510474 GOLGA2Q08379 1002 aa11.24□□□□□ -0.61
NEK11-208ENST00000510474 CDCA7LQ96GN5 454 aa11.24□□□□□ -0.61
NEK11-208ENST00000510474 RCAN3Q9UKA8 241 aa11.24□□□□□ -0.61
NEK11-208ENST00000510474 IRX6P78412 446 aaPredicted RBP11.24□□□□□ -0.61
NEK11-208ENST00000510474 RUNDC1Q96C34 613 aa11.24□□□□□ -0.61
NEK11-208ENST00000510474 ANKARQ7Z5J8 1434 aa11.23□□□□□ -0.61
NEK11-208ENST00000510474 PLEKHG3A1L390 1219 aa11.23□□□□□ -0.61
NEK11-208ENST00000510474 SUGP2Q8IX01 1082 aaKnown RBP eCLIP11.23□□□□□ -0.61
NEK11-208ENST00000510474 NKTRP30414 1462 aaKnown RBP11.23□□□□□ -0.61
NEK11-208ENST00000510474 MAP2P11137 1827 aaKnown RBP11.23□□□□□ -0.61
NEK11-208ENST00000510474 AATKQ6ZMQ8 1374 aa11.23□□□□□ -0.61
NEK11-208ENST00000510474 FMN2Q9NZ56 1722 aa11.23□□□□□ -0.61
NEK11-208ENST00000510474 USP6P35125 1406 aa11.22□□□□□ -0.61
NEK11-208ENST00000510474 PPP4R2Q9NY27 417 aa11.22□□□□□ -0.61
NEK11-208ENST00000510474 CDK12Q9NYV4 1490 aaPredicted RBP11.22□□□□□ -0.61
NEK11-208ENST00000510474 KCNA6P17658 529 aa11.21□□□□□ -0.61
NEK11-208ENST00000510474 RBM19Q9Y4C8 960 aaKnown RBP11.21□□□□□ -0.61
NEK11-208ENST00000510474 NCKAP5LQ9HCH0 1330 aa11.21□□□□□ -0.61
NEK11-208ENST00000510474 NPHP4O75161 1426 aaPredicted RBP11.21□□□□□ -0.61
NEK11-208ENST00000510474 DUSP27Q5VZP5 1158 aa11.21□□□□□ -0.62
NEK11-208ENST00000510474 NALCNQ8IZF0 1738 aa11.21□□□□□ -0.62
NEK11-208ENST00000510474 U2AF1L5P0DN76 240 aaPredicted RBP11.2□□□□□ -0.62
NEK11-208ENST00000510474 RRP1P56182 461 aaKnown RBP11.2□□□□□ -0.62
NEK11-208ENST00000510474 U2AF1Q01081 240 aaKnown RBP eCLIP11.2□□□□□ -0.62
NEK11-208ENST00000510474 SLFN5Q08AF3 891 aa11.2□□□□□ -0.62
NEK11-208ENST00000510474 COG3Q96JB2 828 aa11.2□□□□□ -0.62
NEK11-208ENST00000510474 ACEP12821 1306 aa11.2□□□□□ -0.62
NEK11-208ENST00000510474 RGPD8O14715 1765 aaPredicted RBP11.2□□□□□ -0.62
NEK11-208ENST00000510474 E9PSI1 815 aa11.2□□□□□ -0.62
NEK11-208ENST00000510474 NME9Q86XW9 330 aa11.2□□□□□ -0.62
NEK11-208ENST00000510474 VSIG10Q8N0Z9 540 aa11.2□□□□□ -0.62
NEK11-208ENST00000510474 OVOS2A0A0J9YW53 1432 aa11.2□□□□□ -0.62
NEK11-208ENST00000510474 OVOS2Q6IE36 1432 aa11.2□□□□□ -0.62
NEK11-208ENST00000510474 CCDC27Q2M243 656 aa11.19□□□□□ -0.62
NEK11-208ENST00000510474 DHX37Q8IY37 1157 aaKnown RBP11.19□□□□□ -0.62
NEK11-208ENST00000510474 TRMT2AQ8IZ69 625 aaKnown RBP11.19□□□□□ -0.62
NEK11-208ENST00000510474 NWD1Q149M9 1564 aa11.19□□□□□ -0.62
NEK11-208ENST00000510474 DIAPH1O60610 1272 aaKnown RBP11.19□□□□□ -0.62
NEK11-208ENST00000510474 SSH2Q76I76 1423 aa11.19□□□□□ -0.62
NEK11-208ENST00000510474 TCP11L2Q8N4U5 519 aa11.19□□□□□ -0.62
NEK11-208ENST00000510474 IL27Q8NEV9 243 aa11.19□□□□□ -0.62
NEK11-208ENST00000510474 PHF23Q9BUL5 403 aaPredicted RBP11.19□□□□□ -0.62
NEK11-208ENST00000510474 POLKQ9UBT6 870 aa11.19□□□□□ -0.62
NEK11-208ENST00000510474 TTC21BQ7Z4L5 1316 aa11.18□□□□□ -0.62
NEK11-208ENST00000510474 TTC21AQ8NDW8 1320 aa11.18□□□□□ -0.62
NEK11-208ENST00000510474 WWC1Q8IX03 1113 aa11.18□□□□□ -0.62
NEK11-208ENST00000510474 PNNQ9H307 717 aaKnown RBP11.18□□□□□ -0.62
NEK11-208ENST00000510474 U2SURPO15042 1029 aaKnown RBP11.17□□□□□ -0.62
NEK11-208ENST00000510474 SAMD1Q6SPF0 538 aaPredicted RBP11.17□□□□□ -0.62
NEK11-208ENST00000510474 ADGRL3Q9HAR2 1447 aa11.17□□□□□ -0.62
NEK11-208ENST00000510474 NUTM2FA1L443 756 aa11.17□□□□□ -0.62
NEK11-208ENST00000510474 LRRC7Q96NW7 1537 aa11.16□□□□□ -0.62
NEK11-208ENST00000510474 FANCIQ9NVI1 1328 aa11.16□□□□□ -0.62
NEK11-208ENST00000510474 WDR63Q8IWG1 891 aa11.16□□□□□ -0.62
NEK11-208ENST00000510474 MAPK8IP3Q9UPT6 1336 aa11.16□□□□□ -0.62
NEK11-208ENST00000510474 PLEKHF1Q96S99 279 aa11.15□□□□□ -0.62
NEK11-208ENST00000510474 USP54Q70EL1 1684 aa11.15□□□□□ -0.62
NEK11-208ENST00000510474 USP31Q70CQ4 1352 aa11.15□□□□□ -0.62
NEK11-208ENST00000510474 FCHSD2O94868 740 aa11.14□□□□□ -0.63
NEK11-208ENST00000510474 NGDNQ8NEJ9 315 aaKnown RBP11.14□□□□□ -0.63
NEK11-208ENST00000510474 ZRANB1Q9UGI0 708 aa11.14□□□□□ -0.63
NEK11-208ENST00000510474 PIK3C2AO00443 1686 aa11.14□□□□□ -0.63
NEK11-208ENST00000510474 PPM1GO15355 546 aaPredicted RBP11.14□□□□□ -0.63
NEK11-208ENST00000510474 EMILIN1Q9Y6C2 1016 aa11.14□□□□□ -0.63
NEK11-208ENST00000510474 SPINK5Q9NQ38 1064 aaPredicted RBP11.13□□□□□ -0.63
NEK11-208ENST00000510474 RRP7AQ9Y3A4 280 aaKnown RBP11.13□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms