RNA–Protein interactions for RNA: ENST00000510217.1

PFDN1-203, Transcript of prefoldin subunit 1, humanhuman

TSL 2 BASIC

Gene PFDN1, Length 1,091 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PFDN1-203ENST00000510217 ROCK2O75116 1388 aaKnown RBP14.81□□□□□ -0.04
PFDN1-203ENST00000510217 LMOD2Q6P5Q4 547 aa14.8□□□□□ -0.04
PFDN1-203ENST00000510217 COL14A1Q05707 1796 aaKnown RBP14.8□□□□□ -0.04
PFDN1-203ENST00000510217 PLEKHG5O94827 1062 aa14.79□□□□□ -0.04
PFDN1-203ENST00000510217 RALGAPBQ86X10 1494 aa14.79□□□□□ -0.04
PFDN1-203ENST00000510217 NGDNQ8NEJ9 315 aaKnown RBP14.79□□□□□ -0.04
PFDN1-203ENST00000510217 PPIP5K1Q6PFW1 1433 aa14.78□□□□□ -0.04
PFDN1-203ENST00000510217 HAP1P54257 671 aaPredicted RBP14.78□□□□□ -0.04
PFDN1-203ENST00000510217 UPF1Q92900 1129 aaKnown RBP eCLIP14.78□□□□□ -0.047e-8■■■■■ 39
PFDN1-203ENST00000510217 NRKQ7Z2Y5 1582 aa14.77□□□□□ -0.04
PFDN1-203ENST00000510217 NBPF8Q3BBV2 869 aa14.77□□□□□ -0.05
PFDN1-203ENST00000510217 UNC5CLQ8IV45 518 aa14.77□□□□□ -0.05
PFDN1-203ENST00000510217 CCDC61Q9Y6R9 512 aa14.77□□□□□ -0.05
PFDN1-203ENST00000510217 ACEP12821 1306 aa14.76□□□□□ -0.05
PFDN1-203ENST00000510217 PLEKHG3A1L390 1219 aa14.76□□□□□ -0.05
PFDN1-203ENST00000510217 PAK3O75914 559 aaPredicted RBP14.75□□□□□ -0.05
PFDN1-203ENST00000510217 SRPK2P78362 688 aaKnown RBP14.75□□□□□ -0.05
PFDN1-203ENST00000510217 GJD4Q96KN9 370 aaPredicted RBP14.75□□□□□ -0.05
PFDN1-203ENST00000510217 BRWD3Q6RI45 1802 aa14.75□□□□□ -0.05
PFDN1-203ENST00000510217 TONSLQ96HA7 1378 aa14.74□□□□□ -0.05
PFDN1-203ENST00000510217 CABP2Q9NPB3 220 aa14.74□□□□□ -0.05
PFDN1-203ENST00000510217 AKAP12Q02952 1782 aa14.74□□□□□ -0.05
PFDN1-203ENST00000510217 FAM83GA6ND36 823 aa14.73□□□□□ -0.05
PFDN1-203ENST00000510217 ATAD2Q6PL18 1390 aa14.73□□□□□ -0.05
PFDN1-203ENST00000510217 PIK3C2AO00443 1686 aa14.72□□□□□ -0.05
PFDN1-203ENST00000510217 USP6P35125 1406 aa14.72□□□□□ -0.05
PFDN1-203ENST00000510217 SBNO2Q9Y2G9 1366 aa14.72□□□□□ -0.05
PFDN1-203ENST00000510217 VPS72Q15906 364 aa14.71□□□□□ -0.05
PFDN1-203ENST00000510217 LMO7Q8WWI1 1683 aa14.71□□□□□ -0.06
PFDN1-203ENST00000510217 EVC2Q86UK5 1308 aa14.7□□□□□ -0.06
PFDN1-203ENST00000510217 NCBP3Q53F19 620 aaKnown RBP14.7□□□□□ -0.06
PFDN1-203ENST00000510217 EP400Q96L91 3159 aa14.7□□□□□ -0.06
PFDN1-203ENST00000510217 MON2Q7Z3U7 1717 aa14.69□□□□□ -0.06
PFDN1-203ENST00000510217 USP19O94966 1318 aa14.69□□□□□ -0.06
PFDN1-203ENST00000510217 SSH2Q76I76 1423 aa14.69□□□□□ -0.06
PFDN1-203ENST00000510217 NUTM2GQ5VZR2 741 aa14.69□□□□□ -0.06
PFDN1-203ENST00000510217 BRD4O60885 1362 aaPredicted RBP14.69□□□□□ -0.06
PFDN1-203ENST00000510217 KIAA0232Q92628 1395 aa14.69□□□□□ -0.06
PFDN1-203ENST00000510217 THSD7AQ9UPZ6 1657 aa14.68□□□□□ -0.06
PFDN1-203ENST00000510217 SLIT3O75094 1523 aa14.68□□□□□ -0.06
PFDN1-203ENST00000510217 BTG4Q9NY30 223 aa14.68□□□□□ -0.06
PFDN1-203ENST00000510217 CARD11Q9BXL7 1154 aa14.67□□□□□ -0.06
PFDN1-203ENST00000510217 PRDM11Q9NQV5 511 aa14.67□□□□□ -0.06
PFDN1-203ENST00000510217 CABP1Q9NZU7 370 aa14.67□□□□□ -0.06
PFDN1-203ENST00000510217 ZEB1P37275 1124 aaPredicted RBP14.66□□□□□ -0.06
PFDN1-203ENST00000510217 CPDO75976 1380 aa14.65□□□□□ -0.06
PFDN1-203ENST00000510217 SEPT12Q8IYM1 358 aa14.65□□□□□ -0.06
PFDN1-203ENST00000510217 ABTB2Q8N961 1025 aa14.65□□□□□ -0.06
PFDN1-203ENST00000510217 CCDC9Q9Y3X0 531 aaKnown RBP14.65□□□□□ -0.06
PFDN1-203ENST00000510217 CPSF1Q10570 1443 aaKnown RBP14.65□□□□□ -0.06
PFDN1-203ENST00000510217 CAMTA1Q9Y6Y1 1673 aa14.65□□□□□ -0.06
PFDN1-203ENST00000510217 ONECUT3O60422 494 aaPredicted RBP14.64□□□□□ -0.07
PFDN1-203ENST00000510217 CHRNA2Q15822 529 aa14.64□□□□□ -0.07
PFDN1-203ENST00000510217 USP54Q70EL1 1684 aa14.64□□□□□ -0.07
PFDN1-203ENST00000510217 CD163L1Q9NR16 1453 aa14.63□□□□□ -0.07
PFDN1-203ENST00000510217 ZC3H6P61129 1189 aaKnown RBP14.63□□□□□ -0.07
PFDN1-203ENST00000510217 SPATA31A5Q5VU36 1347 aa14.63□□□□□ -0.07
PFDN1-203ENST00000510217 SPATA31A7Q8IWB4 1347 aa14.63□□□□□ -0.07
PFDN1-203ENST00000510217 COL18A1P39060 1754 aa14.62□□□□□ -0.07
PFDN1-203ENST00000510217 FAM98CQ17RN3 349 aaKnown RBP14.61□□□□□ -0.07
PFDN1-203ENST00000510217 NLRP13Q86W25 1043 aa14.61□□□□□ -0.07
PFDN1-203ENST00000510217 BLMP54132 1417 aaPredicted RBP14.6□□□□□ -0.07
PFDN1-203ENST00000510217 GCP02774 474 aa14.6□□□□□ -0.07
PFDN1-203ENST00000510217 COL5A2P05997 1499 aaPredicted RBP14.6□□□□□ -0.07
PFDN1-203ENST00000510217 NFAT5O94916 1531 aa14.6□□□□□ -0.07
PFDN1-203ENST00000510217 SPATA31A1Q5TZJ5 1347 aa14.6□□□□□ -0.07
PFDN1-203ENST00000510217 TTC21BQ7Z4L5 1316 aa14.59□□□□□ -0.07
PFDN1-203ENST00000510217 WNK3Q9BYP7 1800 aa14.59□□□□□ -0.07
PFDN1-203ENST00000510217 KTN1Q86UP2 1357 aaKnown RBP14.59□□□□□ -0.07
PFDN1-203ENST00000510217 NLRP6P59044 892 aa14.58□□□□□ -0.08
PFDN1-203ENST00000510217 KRT27Q7Z3Y8 459 aa14.58□□□□□ -0.08
PFDN1-203ENST00000510217 ZNF692Q9BU19 519 aaPredicted RBP14.58□□□□□ -0.08
PFDN1-203ENST00000510217 STRN4Q9NRL3 753 aa14.58□□□□□ -0.08
PFDN1-203ENST00000510217 TTC21AQ8NDW8 1320 aa14.58□□□□□ -0.08
PFDN1-203ENST00000510217 TNS1Q9HBL0 1735 aaKnown RBP14.58□□□□□ -0.08
PFDN1-203ENST00000510217 A0A0G2JS52 829 aa14.57□□□□□ -0.08
PFDN1-203ENST00000510217 MYT1Q01538 1121 aa14.57□□□□□ -0.08
PFDN1-203ENST00000510217 TESK2Q96S53 571 aa14.57□□□□□ -0.08
PFDN1-203ENST00000510217 RGPD1P0DJD0 1748 aa14.57□□□□□ -0.08
PFDN1-203ENST00000510217 PARP4Q9UKK3 1724 aaKnown RBP14.57□□□□□ -0.08
PFDN1-203ENST00000510217 RGPD5Q99666 1765 aa14.56□□□□□ -0.08
PFDN1-203ENST00000510217 CCDC125Q86Z20 511 aa14.56□□□□□ -0.08
PFDN1-203ENST00000510217 AATKQ6ZMQ8 1374 aa14.56□□□□□ -0.08
PFDN1-203ENST00000510217 ABCC6O95255 1503 aa14.56□□□□□ -0.08
PFDN1-203ENST00000510217 ST20-MTHFSA0A0A6YYL1 179 aa14.55□□□□□ -0.08
PFDN1-203ENST00000510217 NPM3O75607 178 aaKnown RBP14.55□□□□□ -0.08
PFDN1-203ENST00000510217 LARP1Q6PKG0 1096 aaKnown RBP14.55□□□□□ -0.08
PFDN1-203ENST00000510217 CLSPNQ9HAW4 1339 aa14.55□□□□□ -0.08
PFDN1-203ENST00000510217 A0A1W2PP64 1363 aa14.55□□□□□ -0.08
PFDN1-203ENST00000510217 USP47Q96K76 1375 aa14.55□□□□□ -0.08
PFDN1-203ENST00000510217 LRRC37A3O60309 1634 aa14.55□□□□□ -0.08
PFDN1-203ENST00000510217 EDC4Q6P2E9 1401 aaKnown RBP14.54□□□□□ -0.08
PFDN1-203ENST00000510217 LTN1O94822 1766 aa14.54□□□□□ -0.08
PFDN1-203ENST00000510217 CRB1P82279 1406 aa14.53□□□□□ -0.08
PFDN1-203ENST00000510217 USP31Q70CQ4 1352 aa14.53□□□□□ -0.08
PFDN1-203ENST00000510217 NINLQ9Y2I6 1382 aa14.53□□□□□ -0.08
PFDN1-203ENST00000510217 PUS7Q96PZ0 661 aaKnown RBP14.53□□□□□ -0.08
PFDN1-203ENST00000510217 SLC12A5Q9H2X9 1139 aa14.53□□□□□ -0.08
PFDN1-203ENST00000510217 EVA1CP58658 441 aa14.52□□□□□ -0.09
PFDN1-203ENST00000510217 BARGINQ6ZT62 677 aa14.52□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 108.7 ms