RNA–Protein interactions for RNA: ENST00000509995.5

SNF8-207, Transcript of SNF8, ESCRT-II complex subunit, humanhuman

TSL 3

Gene SNF8, Length 560 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNF8-207ENST00000509995 RGPD3A6NKT7 1758 aaPredicted RBP16.72■□□□□ 0.27
SNF8-207ENST00000509995 RGPD4Q7Z3J3 1758 aa16.72■□□□□ 0.27
SNF8-207ENST00000509995 GIGYF1O75420 1035 aaPredicted RBP16.71■□□□□ 0.27
SNF8-207ENST00000509995 PHF8Q9UPP1 1060 aa16.71■□□□□ 0.27
SNF8-207ENST00000509995 TRPM3Q9HCF6 1732 aaPredicted RBP16.7■□□□□ 0.26
SNF8-207ENST00000509995 CRYBG1Q9Y4K1 1723 aa16.7■□□□□ 0.26
SNF8-207ENST00000509995 ALS2Q96Q42 1657 aa16.7■□□□□ 0.26
SNF8-207ENST00000509995 PLEKHH1Q9ULM0 1364 aa16.7■□□□□ 0.26
SNF8-207ENST00000509995 APLP2Q06481 763 aa16.69■□□□□ 0.26
SNF8-207ENST00000509995 SPATA31A1Q5TZJ5 1347 aa16.69■□□□□ 0.26
SNF8-207ENST00000509995 RPGRIP1LQ68CZ1 1315 aa16.67■□□□□ 0.26
SNF8-207ENST00000509995 PTGER2P43116 358 aa16.66■□□□□ 0.26
SNF8-207ENST00000509995 DLC1Q96QB1 1528 aa16.65■□□□□ 0.26
SNF8-207ENST00000509995 STK26Q9P289 416 aa16.65■□□□□ 0.26
SNF8-207ENST00000509995 ABCC11Q96J66 1382 aa16.64■□□□□ 0.26
SNF8-207ENST00000509995 SYT17Q9BSW7 474 aa16.64■□□□□ 0.25
SNF8-207ENST00000509995 FHDC1Q9C0D6 1143 aaPredicted RBP16.64■□□□□ 0.25
SNF8-207ENST00000509995 ANO8Q9HCE9 1232 aaPredicted RBP16.64■□□□□ 0.25
SNF8-207ENST00000509995 ZBTB7AO95365 584 aa16.63■□□□□ 0.25
SNF8-207ENST00000509995 PDE3BQ13370 1112 aa16.63■□□□□ 0.25
SNF8-207ENST00000509995 PDGFDQ9GZP0 370 aaPredicted RBP16.63■□□□□ 0.25
SNF8-207ENST00000509995 PRDM11Q9NQV5 511 aa16.62■□□□□ 0.25
SNF8-207ENST00000509995 SHANK3Q9BYB0 1731 aa16.62■□□□□ 0.25
SNF8-207ENST00000509995 SBF2Q86WG5 1849 aa16.59■□□□□ 0.25
SNF8-207ENST00000509995 PARP4Q9UKK3 1724 aaKnown RBP16.59■□□□□ 0.25
SNF8-207ENST00000509995 BARGINQ6ZT62 677 aa16.58■□□□□ 0.24
SNF8-207ENST00000509995 STRN4Q9NRL3 753 aa16.58■□□□□ 0.24
SNF8-207ENST00000509995 PEAK1Q9H792 1746 aa16.58■□□□□ 0.24
SNF8-207ENST00000509995 PHRF1Q9P1Y6 1649 aaKnown RBP16.57■□□□□ 0.24
SNF8-207ENST00000509995 YTHDC2Q9H6S0 1430 aaKnown RBP16.57■□□□□ 0.24
SNF8-207ENST00000509995 PMFBP1Q8TBY8 1022 aa16.57■□□□□ 0.24
SNF8-207ENST00000509995 USP35Q9P2H5 1018 aa16.57■□□□□ 0.24
SNF8-207ENST00000509995 ATF5Q9Y2D1 282 aaPredicted RBP16.57■□□□□ 0.24
SNF8-207ENST00000509995 ANKARQ7Z5J8 1434 aa16.56■□□□□ 0.24
SNF8-207ENST00000509995 KIAA0232Q92628 1395 aa16.56■□□□□ 0.24
SNF8-207ENST00000509995 ADGRF5Q8IZF2 1346 aa16.56■□□□□ 0.24
SNF8-207ENST00000509995 SSH2Q76I76 1423 aa16.55■□□□□ 0.24
SNF8-207ENST00000509995 MAP3K5Q99683 1374 aa16.55■□□□□ 0.24
SNF8-207ENST00000509995 PLSCR1O15162 318 aa16.55■□□□□ 0.24
SNF8-207ENST00000509995 TMEM132EQ6IEE7 984 aa16.55■□□□□ 0.24
SNF8-207ENST00000509995 GPRASP1Q5JY77 1395 aa16.54■□□□□ 0.24
SNF8-207ENST00000509995 OVOS2A0A0G2JMS6 1433 aa16.53■□□□□ 0.24
SNF8-207ENST00000509995 OVOS2A0A0J9YW53 1432 aa16.53■□□□□ 0.24
SNF8-207ENST00000509995 OVOS2Q6IE36 1432 aa16.53■□□□□ 0.24
SNF8-207ENST00000509995 C11orf95C9JLR9 678 aaPredicted RBP16.53■□□□□ 0.24
SNF8-207ENST00000509995 CHRNA2Q15822 529 aa16.53■□□□□ 0.24
SNF8-207ENST00000509995 SGIP1Q9BQI5 828 aa16.53■□□□□ 0.24
SNF8-207ENST00000509995 BCL11BQ9C0K0 894 aaPredicted RBP16.52■□□□□ 0.24
SNF8-207ENST00000509995 MTFR1LQ9H019 292 aa16.52■□□□□ 0.24
SNF8-207ENST00000509995 ACIN1Q9UKV3 1341 aaKnown RBP16.51■□□□□ 0.23
SNF8-207ENST00000509995 SIRT1Q96EB6 747 aa16.51■□□□□ 0.23
SNF8-207ENST00000509995 PIK3C2GO75747 1445 aa16.51■□□□□ 0.23
SNF8-207ENST00000509995 GPR162Q16538 588 aa16.5■□□□□ 0.23
SNF8-207ENST00000509995 TCP11L2Q8N4U5 519 aa16.5■□□□□ 0.23
SNF8-207ENST00000509995 LRRC37A3O60309 1634 aa16.48■□□□□ 0.23
SNF8-207ENST00000509995 PROM2Q8N271 834 aa16.48■□□□□ 0.23
SNF8-207ENST00000509995 LMO7Q8WWI1 1683 aa16.48■□□□□ 0.23
SNF8-207ENST00000509995 HSPA6P17066 643 aa16.47■□□□□ 0.23
SNF8-207ENST00000509995 LARP1Q6PKG0 1096 aaKnown RBP16.47■□□□□ 0.23
SNF8-207ENST00000509995 ARXQ96QS3 562 aa16.47■□□□□ 0.23
SNF8-207ENST00000509995 ANKRD30BQ9BXX2 1392 aa16.47■□□□□ 0.23
SNF8-207ENST00000509995 ATP7BP35670 1465 aa16.47■□□□□ 0.23
SNF8-207ENST00000509995 LOC105371045A0A1W2PR82 267 aa16.46■□□□□ 0.23
SNF8-207ENST00000509995 EVA1CP58658 441 aa16.46■□□□□ 0.23
SNF8-207ENST00000509995 STK32BQ9NY57 414 aa16.46■□□□□ 0.23
SNF8-207ENST00000509995 THRAP3Q9Y2W1 955 aaKnown RBP16.46■□□□□ 0.23
SNF8-207ENST00000509995 DHX57Q6P158 1386 aaKnown RBP16.46■□□□□ 0.23
SNF8-207ENST00000509995 PAK3O75914 559 aaPredicted RBP16.45■□□□□ 0.22
SNF8-207ENST00000509995 ITGAEP38570 1179 aa16.45■□□□□ 0.22
SNF8-207ENST00000509995 SAFB2Q14151 953 aaKnown RBP eCLIP16.45■□□□□ 0.22
SNF8-207ENST00000509995 SLC15A2Q16348 729 aa16.45■□□□□ 0.22
SNF8-207ENST00000509995 ZC3H6P61129 1189 aaKnown RBP16.44■□□□□ 0.22
SNF8-207ENST00000509995 PTF1AQ7RTS3 328 aa16.44■□□□□ 0.22
SNF8-207ENST00000509995 TULP4Q9NRJ4 1543 aa16.44■□□□□ 0.22
SNF8-207ENST00000509995 PRAM1Q96QH2 718 aa16.43■□□□□ 0.22
SNF8-207ENST00000509995 AKAP12Q02952 1782 aa16.43■□□□□ 0.22
SNF8-207ENST00000509995 SPATA31E1Q6ZUB1 1445 aa16.42■□□□□ 0.22
SNF8-207ENST00000509995 PRR36Q9H6K5 1346 aa16.42■□□□□ 0.22
SNF8-207ENST00000509995 EIF3AQ14152 1382 aaKnown RBP16.41■□□□□ 0.22
SNF8-207ENST00000509995 ATP10DQ9P241 1426 aa16.41■□□□□ 0.22
SNF8-207ENST00000509995 WNK3Q9BYP7 1800 aa16.4■□□□□ 0.22
SNF8-207ENST00000509995 ITSN1Q15811 1721 aa16.4■□□□□ 0.22
SNF8-207ENST00000509995 TXNRD1Q16881 649 aa16.4■□□□□ 0.22
SNF8-207ENST00000509995 PELP1Q8IZL8 1130 aaKnown RBP16.4■□□□□ 0.22
SNF8-207ENST00000509995 NGDNQ8NEJ9 315 aaKnown RBP16.4■□□□□ 0.22
SNF8-207ENST00000509995 PAPPAQ13219 1627 aa16.4■□□□□ 0.22
SNF8-207ENST00000509995 COL5A2P05997 1499 aaPredicted RBP16.4■□□□□ 0.22
SNF8-207ENST00000509995 TOPAZ1Q8N9V7 1692 aa16.4■□□□□ 0.22
SNF8-207ENST00000509995 AATKQ6ZMQ8 1374 aa16.39■□□□□ 0.21
SNF8-207ENST00000509995 BCL9O00512 1426 aa16.38■□□□□ 0.21
SNF8-207ENST00000509995 RGL3Q3MIN7 710 aa16.38■□□□□ 0.21
SNF8-207ENST00000509995 CPDO75976 1380 aa16.38■□□□□ 0.21
SNF8-207ENST00000509995 CRB1P82279 1406 aa16.37■□□□□ 0.21
SNF8-207ENST00000509995 COL24A1Q17RW2 1714 aa16.36■□□□□ 0.21
SNF8-207ENST00000509995 DDB1Q16531 1140 aa16.36■□□□□ 0.21
SNF8-207ENST00000509995 C14orf93Q9H972 538 aaKnown RBP16.36■□□□□ 0.21
SNF8-207ENST00000509995 NUTM2GQ5VZR2 741 aa16.35■□□□□ 0.21
SNF8-207ENST00000509995 HIRIP3Q9BW71 556 aaPredicted RBP16.35■□□□□ 0.21
SNF8-207ENST00000509995 GPBP1L1Q9HC44 474 aaPredicted RBP16.35■□□□□ 0.21
SNF8-207ENST00000509995 POGKQ9P215 609 aa16.35■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms