RNA–Protein interactions for RNA: ENST00000509857.5

TRAPPC11-206, Transcript of trafficking protein particle complex 11, humanhuman

TSL 4

Gene TRAPPC11, Length 548 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC11-206ENST00000509857 GPR37L1O60883 481 aa14.16□□□□□ -0.14
TRAPPC11-206ENST00000509857 CD2BP2O95400 341 aaKnown RBP14.16□□□□□ -0.14
TRAPPC11-206ENST00000509857 GPKOWQ92917 476 aaPredicted RBP eCLIP14.16□□□□□ -0.14
TRAPPC11-206ENST00000509857 NDUFB9Q9Y6M9 179 aa14.16□□□□□ -0.14
TRAPPC11-206ENST00000509857 WNT7BP56706 349 aa14.15□□□□□ -0.14
TRAPPC11-206ENST00000509857 NBPF14Q5TI25 921 aa14.15□□□□□ -0.14
TRAPPC11-206ENST00000509857 PNMA1Q8ND90 353 aa14.15□□□□□ -0.14
TRAPPC11-206ENST00000509857 ZNF598Q86UK7 904 aaKnown RBP14.13□□□□□ -0.15
TRAPPC11-206ENST00000509857 ZNF511Q8NB15 262 aa14.13□□□□□ -0.15
TRAPPC11-206ENST00000509857 BAP1Q92560 729 aa14.13□□□□□ -0.15
TRAPPC11-206ENST00000509857 SH3BP2P78314 561 aa14.12□□□□□ -0.15
TRAPPC11-206ENST00000509857 SKOR1P84550 965 aa14.12□□□□□ -0.15
TRAPPC11-206ENST00000509857 LINC01559Q495D7 138 aa14.1□□□□□ -0.15
TRAPPC11-206ENST00000509857 PDXDC2PQ6P474 469 aa14.1□□□□□ -0.15
TRAPPC11-206ENST00000509857 PRM3Q9NNZ6 103 aa14.1□□□□□ -0.15
TRAPPC11-206ENST00000509857 TBC1D2BQ9UPU7 963 aa14.1□□□□□ -0.15
TRAPPC11-206ENST00000509857 ZNF697Q5TEC3 545 aa14.09□□□□□ -0.15
TRAPPC11-206ENST00000509857 SH3BP5LQ7L8J4 393 aa14.09□□□□□ -0.15
TRAPPC11-206ENST00000509857 COG6Q9Y2V7 657 aa14.09□□□□□ -0.15
TRAPPC11-206ENST00000509857 GPSM3Q9Y4H4 160 aa14.08□□□□□ -0.16
TRAPPC11-206ENST00000509857 UBTFP17480 764 aaKnown RBP14.07□□□□□ -0.16
TRAPPC11-206ENST00000509857 SH3RF1Q7Z6J0 888 aa14.07□□□□□ -0.16
TRAPPC11-206ENST00000509857 GDPD2Q9HCC8 539 aa14.06□□□□□ -0.16
TRAPPC11-206ENST00000509857 WNT7AO00755 349 aa14.05□□□□□ -0.16
TRAPPC11-206ENST00000509857 BPHLQ86WA6 291 aaPredicted RBP14.05□□□□□ -0.16
TRAPPC11-206ENST00000509857 RC3H1Q5TC82 1133 aaKnown RBP14.04□□□□□ -0.16
TRAPPC11-206ENST00000509857 FOXJ1Q92949 421 aa14.04□□□□□ -0.16
TRAPPC11-206ENST00000509857 POM121Q96HA1 1249 aa14.04□□□□□ -0.16
TRAPPC11-206ENST00000509857 IRF5Q13568 498 aa14.03□□□□□ -0.16
TRAPPC11-206ENST00000509857 C4orf48Q5BLP8 95 aa14.03□□□□□ -0.16
TRAPPC11-206ENST00000509857 OCSTAMPQ9BR26 566 aa14.03□□□□□ -0.16
TRAPPC11-206ENST00000509857 PKD2L1Q9P0L9 805 aa14.03□□□□□ -0.16
TRAPPC11-206ENST00000509857 PTK2Q05397 1052 aa14.02□□□□□ -0.17
TRAPPC11-206ENST00000509857 NISCHQ9Y2I1 1504 aa14.01□□□□□ -0.17
TRAPPC11-206ENST00000509857 RAD21O60216 631 aa14.01□□□□□ -0.17
TRAPPC11-206ENST00000509857 GDF9O60383 454 aa14.01□□□□□ -0.17
TRAPPC11-206ENST00000509857 C1QTNF2Q9BXJ5 285 aa14.01□□□□□ -0.17
TRAPPC11-206ENST00000509857 TRIM67Q6ZTA4 783 aa14□□□□□ -0.17
TRAPPC11-206ENST00000509857 VARSP26640 1264 aaKnown RBP13.99□□□□□ -0.17
TRAPPC11-206ENST00000509857 ABL2P42684 1182 aa13.99□□□□□ -0.17
TRAPPC11-206ENST00000509857 PRR20EP86478 221 aa13.99□□□□□ -0.17
TRAPPC11-206ENST00000509857 PRR20CP86479 221 aa13.99□□□□□ -0.17
TRAPPC11-206ENST00000509857 PRR20DP86480 221 aa13.99□□□□□ -0.17
TRAPPC11-206ENST00000509857 PRR20BP86481 221 aa13.99□□□□□ -0.17
TRAPPC11-206ENST00000509857 PRR20AP86496 221 aa13.99□□□□□ -0.17
TRAPPC11-206ENST00000509857 ARHGAP9Q9BRR9 750 aa13.99□□□□□ -0.17
TRAPPC11-206ENST00000509857 A6NJR5 290 aa13.98□□□□□ -0.17
TRAPPC11-206ENST00000509857 ZBBXA8MT70 800 aa13.98□□□□□ -0.17
TRAPPC11-206ENST00000509857 FBXO45P0C2W1 286 aa13.98□□□□□ -0.17
TRAPPC11-206ENST00000509857 EHBP1Q8NDI1 1231 aa13.98□□□□□ -0.17
TRAPPC11-206ENST00000509857 SIAH2O43255 324 aa13.97□□□□□ -0.17
TRAPPC11-206ENST00000509857 NR1H3Q13133 447 aa13.97□□□□□ -0.17
TRAPPC11-206ENST00000509857 AGERQ15109 404 aa13.97□□□□□ -0.17
TRAPPC11-206ENST00000509857 MRGPRX2Q96LB1 330 aa13.97□□□□□ -0.17
TRAPPC11-206ENST00000509857 TRMT44Q8IYL2 757 aaKnown RBP13.96□□□□□ -0.17
TRAPPC11-206ENST00000509857 CLUAP1Q96AJ1 413 aa13.96□□□□□ -0.17
TRAPPC11-206ENST00000509857 FOXC1Q12948 553 aa13.95□□□□□ -0.18
TRAPPC11-206ENST00000509857 MPNDQ8N594 471 aa13.95□□□□□ -0.18
TRAPPC11-206ENST00000509857 FAM174AQ8TBP5 190 aa13.95□□□□□ -0.18
TRAPPC11-206ENST00000509857 MAGEB6P1A0A0J9YX57 407 aa13.94□□□□□ -0.18
TRAPPC11-206ENST00000509857 ERFEQ4G0M1 354 aa13.94□□□□□ -0.18
TRAPPC11-206ENST00000509857 ADAM32Q8TC27 787 aa13.94□□□□□ -0.18
TRAPPC11-206ENST00000509857 WASHC4Q2M389 1173 aa13.93□□□□□ -0.18
TRAPPC11-206ENST00000509857 FNBP4Q8N3X1 1017 aaPredicted RBP13.93□□□□□ -0.18
TRAPPC11-206ENST00000509857 CARD14Q9BXL6 1004 aa13.93□□□□□ -0.18
TRAPPC11-206ENST00000509857 ZBTB33Q86T24 672 aa13.92□□□□□ -0.18
TRAPPC11-206ENST00000509857 PROSER2Q86WR7 435 aaPredicted RBP13.92□□□□□ -0.18
TRAPPC11-206ENST00000509857 TNFRSF10AO00220 468 aa13.91□□□□□ -0.18
TRAPPC11-206ENST00000509857 TOR4AQ9NXH8 423 aa13.91□□□□□ -0.18
TRAPPC11-206ENST00000509857 WWC1Q8IX03 1113 aa13.9□□□□□ -0.18
TRAPPC11-206ENST00000509857 CDK15Q96Q40 435 aa13.9□□□□□ -0.18
TRAPPC11-206ENST00000509857 SNIP1Q8TAD8 396 aaKnown RBP13.89□□□□□ -0.19
TRAPPC11-206ENST00000509857 PDZRN3Q9UPQ7 1066 aa13.89□□□□□ -0.19
TRAPPC11-206ENST00000509857 MAP4K5Q9Y4K4 846 aa13.89□□□□□ -0.19
TRAPPC11-206ENST00000509857 ERICH6Q7L0X2 663 aa13.88□□□□□ -0.19
TRAPPC11-206ENST00000509857 CYP4X1Q8N118 509 aa13.87□□□□□ -0.19
TRAPPC11-206ENST00000509857 SLC10A4Q96EP9 437 aa13.87□□□□□ -0.19
TRAPPC11-206ENST00000509857 ZMYND15Q9H091 742 aa13.87□□□□□ -0.19
TRAPPC11-206ENST00000509857 ZNF330Q9Y3S2 320 aaPredicted RBP13.87□□□□□ -0.19
TRAPPC11-206ENST00000509857 TLL2Q9Y6L7 1015 aa13.87□□□□□ -0.19
TRAPPC11-206ENST00000509857 MCCD1P59942 119 aaPredicted RBP13.86□□□□□ -0.19
TRAPPC11-206ENST00000509857 VAC14Q08AM6 782 aa13.86□□□□□ -0.19
TRAPPC11-206ENST00000509857 CDV3Q9UKY7 258 aaKnown RBP13.86□□□□□ -0.19
TRAPPC11-206ENST00000509857 ZNF592Q92610 1267 aa13.85□□□□□ -0.19
TRAPPC11-206ENST00000509857 C14orf37Q86TY3 774 aa13.84□□□□□ -0.19
TRAPPC11-206ENST00000509857 NRG2O14511 850 aaPredicted RBP13.83□□□□□ -0.2
TRAPPC11-206ENST00000509857 SOX11P35716 441 aa13.83□□□□□ -0.2
TRAPPC11-206ENST00000509857 TTC24A2A3L6 582 aaPredicted RBP13.82□□□□□ -0.2
TRAPPC11-206ENST00000509857 EIF4G2P78344 907 aaKnown RBP eCLIP13.82□□□□□ -0.2
TRAPPC11-206ENST00000509857 LAPTM4AQ15012 233 aa13.82□□□□□ -0.2
TRAPPC11-206ENST00000509857 DZIP3Q86Y13 1208 aaKnown RBP13.82□□□□□ -0.2
TRAPPC11-206ENST00000509857 PCDHB9Q9Y5E1 797 aa13.82□□□□□ -0.2
TRAPPC11-206ENST00000509857 TRAK2O60296 914 aa13.81□□□□□ -0.2
TRAPPC11-206ENST00000509857 GFRA3O60609 400 aa13.81□□□□□ -0.2
TRAPPC11-206ENST00000509857 ADH1CP00326 375 aa13.81□□□□□ -0.2
TRAPPC11-206ENST00000509857 GRM5P41594 1212 aa13.81□□□□□ -0.2
TRAPPC11-206ENST00000509857 ALDH1A1P00352 501 aa13.8□□□□□ -0.2
TRAPPC11-206ENST00000509857 SMPD1P17405 629 aa13.8□□□□□ -0.2
TRAPPC11-206ENST00000509857 NBPF20Q3BBV1 942 aa13.8□□□□□ -0.2
TRAPPC11-206ENST00000509857 J3QL48 77 aa13.79□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 8.7 ms