RNA–Protein interactions for RNA: ENST00000509848.5

ARHGEF28-208, Transcript of Rho guanine nucleotide exchange factor 28, humanhuman

TSL 4

Gene ARHGEF28, Length 560 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF28-208ENST00000509848 BTG4Q9NY30 223 aa28.6■■■□□ 2.17
ARHGEF28-208ENST00000509848 PLCH1Q4KWH8 1693 aa28.6■■■□□ 2.17
ARHGEF28-208ENST00000509848 SRPK2P78362 688 aaKnown RBP28.59■■■□□ 2.17
ARHGEF28-208ENST00000509848 NBPF8Q3BBV2 869 aa28.59■■■□□ 2.17
ARHGEF28-208ENST00000509848 SEPT12Q8IYM1 358 aa28.58■■■□□ 2.17
ARHGEF28-208ENST00000509848 CABP2Q9NPB3 220 aa28.58■■■□□ 2.17
ARHGEF28-208ENST00000509848 PLEKHG3A1L390 1219 aa28.56■■■□□ 2.16
ARHGEF28-208ENST00000509848 ITSN1Q15811 1721 aa28.56■■■□□ 2.16
ARHGEF28-208ENST00000509848 POLR3AO14802 1390 aaPredicted RBP28.55■■■□□ 2.16
ARHGEF28-208ENST00000509848 NWD2Q9ULI1 1742 aa28.55■■■□□ 2.16
ARHGEF28-208ENST00000509848 PRDM11Q9NQV5 511 aa28.53■■■□□ 2.16
ARHGEF28-208ENST00000509848 TOPAZ1Q8N9V7 1692 aa28.51■■■□□ 2.16
ARHGEF28-208ENST00000509848 A0A0G2JS52 829 aa28.51■■■□□ 2.15
ARHGEF28-208ENST00000509848 ONECUT3O60422 494 aaPredicted RBP28.51■■■□□ 2.15
ARHGEF28-208ENST00000509848 MYT1Q01538 1121 aa28.51■■■□□ 2.15
ARHGEF28-208ENST00000509848 CHRNA2Q15822 529 aa28.51■■■□□ 2.15
ARHGEF28-208ENST00000509848 ZC3H6P61129 1189 aaKnown RBP28.5■■■□□ 2.15
ARHGEF28-208ENST00000509848 FAM98CQ17RN3 349 aaKnown RBP28.5■■■□□ 2.15
ARHGEF28-208ENST00000509848 PPIP5K1Q6PFW1 1433 aa28.5■■■□□ 2.15
ARHGEF28-208ENST00000509848 ABTB2Q8N961 1025 aa28.49■■■□□ 2.15
ARHGEF28-208ENST00000509848 CRYBG1Q9Y4K1 1723 aa28.49■■■□□ 2.15
ARHGEF28-208ENST00000509848 KIAA0232Q92628 1395 aa28.49■■■□□ 2.15
ARHGEF28-208ENST00000509848 COL14A1Q05707 1796 aaKnown RBP28.48■■■□□ 2.15
ARHGEF28-208ENST00000509848 EP400Q96L91 3159 aa28.48■■■□□ 2.15
ARHGEF28-208ENST00000509848 ROCK2O75116 1388 aaKnown RBP28.48■■■□□ 2.15
ARHGEF28-208ENST00000509848 NRAPQ86VF7 1730 aa28.47■■■□□ 2.15
ARHGEF28-208ENST00000509848 CCDC125Q86Z20 511 aa28.47■■■□□ 2.15
ARHGEF28-208ENST00000509848 CABP1Q9NZU7 370 aa28.47■■■□□ 2.15
ARHGEF28-208ENST00000509848 QRICH2Q9H0J4 1663 aa28.46■■■□□ 2.15
ARHGEF28-208ENST00000509848 KRT27Q7Z3Y8 459 aa28.46■■■□□ 2.15
ARHGEF28-208ENST00000509848 TRPM1Q7Z4N2 1603 aa28.46■■■□□ 2.15
ARHGEF28-208ENST00000509848 BRWD3Q6RI45 1802 aa28.46■■■□□ 2.15
ARHGEF28-208ENST00000509848 STRN4Q9NRL3 753 aa28.43■■■□□ 2.14
ARHGEF28-208ENST00000509848 SPATA31A5Q5VU36 1347 aa28.43■■■□□ 2.14
ARHGEF28-208ENST00000509848 SPATA31A7Q8IWB4 1347 aa28.43■■■□□ 2.14
ARHGEF28-208ENST00000509848 EVC2Q86UK5 1308 aa28.42■■■□□ 2.14
ARHGEF28-208ENST00000509848 PHRF1Q9P1Y6 1649 aaKnown RBP28.4■■■□□ 2.14
ARHGEF28-208ENST00000509848 BLMP54132 1417 aaPredicted RBP28.4■■■□□ 2.14
ARHGEF28-208ENST00000509848 DEFB132Q7Z7B7 95 aa28.39■■■□□ 2.14
ARHGEF28-208ENST00000509848 FAM182BQ5T319 152 aa28.38■■■□□ 2.13
ARHGEF28-208ENST00000509848 NLRP13Q86W25 1043 aa28.38■■■□□ 2.13
ARHGEF28-208ENST00000509848 USP19O94966 1318 aa28.37■■■□□ 2.13
ARHGEF28-208ENST00000509848 EVA1CP58658 441 aa28.36■■■□□ 2.13
ARHGEF28-208ENST00000509848 GCP02774 474 aa28.35■■■□□ 2.13
ARHGEF28-208ENST00000509848 SF3B2Q13435 895 aaKnown RBP28.35■■■□□ 2.13
ARHGEF28-208ENST00000509848 USP35Q9P2H5 1018 aa28.35■■■□□ 2.13
ARHGEF28-208ENST00000509848 ZRANB1Q9UGI0 708 aa28.35■■■□□ 2.13
ARHGEF28-208ENST00000509848 SPATA31A1Q5TZJ5 1347 aa28.35■■■□□ 2.13
ARHGEF28-208ENST00000509848 USP6P35125 1406 aa28.34■■■□□ 2.13
ARHGEF28-208ENST00000509848 NLRP6P59044 892 aa28.33■■■□□ 2.13
ARHGEF28-208ENST00000509848 NRKQ7Z2Y5 1582 aa28.33■■■□□ 2.12
ARHGEF28-208ENST00000509848 ZBTB7CA1YPR0 619 aa28.32■■■□□ 2.12
ARHGEF28-208ENST00000509848 LARP1Q6PKG0 1096 aaKnown RBP28.31■■■□□ 2.12
ARHGEF28-208ENST00000509848 CARD11Q9BXL7 1154 aa28.31■■■□□ 2.12
ARHGEF28-208ENST00000509848 CPDO75976 1380 aa28.3■■■□□ 2.12
ARHGEF28-208ENST00000509848 TONSLQ96HA7 1378 aa28.3■■■□□ 2.12
ARHGEF28-208ENST00000509848 TRIM26Q12899 539 aaPredicted RBP28.3■■■□□ 2.12
ARHGEF28-208ENST00000509848 CAMTA1Q9Y6Y1 1673 aa28.29■■■□□ 2.12
ARHGEF28-208ENST00000509848 BRD4O60885 1362 aaPredicted RBP28.29■■■□□ 2.12
ARHGEF28-208ENST00000509848 SSH2Q76I76 1423 aa28.28■■■□□ 2.12
ARHGEF28-208ENST00000509848 THSD7AQ9UPZ6 1657 aa28.25■■■□□ 2.11
ARHGEF28-208ENST00000509848 TTC21BQ7Z4L5 1316 aa28.24■■■□□ 2.11
ARHGEF28-208ENST00000509848 ZNF692Q9BU19 519 aaPredicted RBP28.23■■■□□ 2.11
ARHGEF28-208ENST00000509848 LMO7Q8WWI1 1683 aa28.22■■■□□ 2.11
ARHGEF28-208ENST00000509848 SOX12O15370 315 aa28.21■■■□□ 2.11
ARHGEF28-208ENST00000509848 BAG6P46379 1132 aa28.2■■■□□ 2.1
ARHGEF28-208ENST00000509848 BARGINQ6ZT62 677 aa28.2■■■□□ 2.1
ARHGEF28-208ENST00000509848 TCP11L2Q8N4U5 519 aa28.2■■■□□ 2.1
ARHGEF28-208ENST00000509848 SLIT3O75094 1523 aa28.19■■■□□ 2.1
ARHGEF28-208ENST00000509848 PIK3C2AO00443 1686 aa28.19■■■□□ 2.1
ARHGEF28-208ENST00000509848 EN1Q05925 392 aaPredicted RBP28.18■■■□□ 2.1
ARHGEF28-208ENST00000509848 KTN1Q86UP2 1357 aaKnown RBP28.18■■■□□ 2.1
ARHGEF28-208ENST00000509848 COL5A2P05997 1499 aaPredicted RBP28.18■■■□□ 2.1
ARHGEF28-208ENST00000509848 CPSF1Q10570 1443 aaKnown RBP28.18■■■□□ 2.1
ARHGEF28-208ENST00000509848 AATKQ6ZMQ8 1374 aa28.16■■■□□ 2.1
ARHGEF28-208ENST00000509848 SBNO2Q9Y2G9 1366 aa28.16■■■□□ 2.1
ARHGEF28-208ENST00000509848 PDE3BQ13370 1112 aa28.16■■■□□ 2.1
ARHGEF28-208ENST00000509848 TMC1Q8TDI8 760 aa28.16■■■□□ 2.1
ARHGEF28-208ENST00000509848 TRIM37O94972 964 aa28.15■■■□□ 2.1
ARHGEF28-208ENST00000509848 SUGP2Q8IX01 1082 aaKnown RBP eCLIP28.15■■■□□ 2.13e-6■■■□□ 18.1
ARHGEF28-208ENST00000509848 AXIN2Q9Y2T1 843 aa28.15■■■□□ 2.1
ARHGEF28-208ENST00000509848 TTC21AQ8NDW8 1320 aa28.15■■■□□ 2.1
ARHGEF28-208ENST00000509848 FAM196AQ6ZSG2 479 aa28.14■■■□□ 2.1
ARHGEF28-208ENST00000509848 SRCAPQ6ZRS2 3230 aa28.13■■■□□ 2.09
ARHGEF28-208ENST00000509848 SLC12A5Q9H2X9 1139 aa28.13■■■□□ 2.09
ARHGEF28-208ENST00000509848 AKAP12Q02952 1782 aa28.12■■■□□ 2.09
ARHGEF28-208ENST00000509848 ARHGEF25Q86VW2 580 aa28.12■■■□□ 2.09
ARHGEF28-208ENST00000509848 THRAP3Q9Y2W1 955 aaKnown RBP28.12■■■□□ 2.09
ARHGEF28-208ENST00000509848 CRB1P82279 1406 aa28.11■■■□□ 2.09
ARHGEF28-208ENST00000509848 TOM1L2Q6ZVM7 507 aa28.11■■■□□ 2.09
ARHGEF28-208ENST00000509848 KCNH5Q8NCM2 988 aa28.11■■■□□ 2.09
ARHGEF28-208ENST00000509848 PSDA5PKW4 1024 aaPredicted RBP28.09■■■□□ 2.09
ARHGEF28-208ENST00000509848 CD163L1Q9NR16 1453 aa28.08■■■□□ 2.09
ARHGEF28-208ENST00000509848 ST20-MTHFSA0A0A6YYL1 179 aa28.08■■■□□ 2.09
ARHGEF28-208ENST00000509848 EZH2Q15910 746 aaKnown RBP28.08■■■□□ 2.09
ARHGEF28-208ENST00000509848 NME9Q86XW9 330 aa28.08■■■□□ 2.09
ARHGEF28-208ENST00000509848 RGPD1P0DJD0 1748 aa28.07■■■□□ 2.08
ARHGEF28-208ENST00000509848 APBA3O96018 575 aa28.06■■■□□ 2.08
ARHGEF28-208ENST00000509848 HDGFL2Q7Z4V5 671 aaPredicted RBP28.06■■■□□ 2.08
ARHGEF28-208ENST00000509848 COL18A1P39060 1754 aa28.06■■■□□ 2.08
Retrieved 100 of 20,778 RNA–protein pairs in 41.3 ms