RNA–Protein interactions for RNA: ENST00000509784.1

CALCOCO2-216, Transcript of calcium binding and coiled-coil domain 2, human

TSL 4

Gene CALCOCO2, Length 578 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CALCOCO2-216	ENST00000509784	ALG2	Q9H553	416 aa		5.81	□□□□□ -1.48
CALCOCO2-216	ENST00000509784	ADH1B	P00325	375 aa		5.8	□□□□□ -1.48
CALCOCO2-216	ENST00000509784	CCDC24	Q8N4L8	307 aa		5.8	□□□□□ -1.48
CALCOCO2-216	ENST00000509784	EVA1B	Q9NVM1	165 aa		5.8	□□□□□ -1.48
CALCOCO2-216	ENST00000509784	ZBBX	A8MT70	800 aa		5.79	□□□□□ -1.48
CALCOCO2-216	ENST00000509784	FBXO45	P0C2W1	286 aa		5.79	□□□□□ -1.48
CALCOCO2-216	ENST00000509784	RFX1	P22670	979 aa		5.79	□□□□□ -1.48
CALCOCO2-216	ENST00000509784	SOX11	P35716	441 aa		5.79	□□□□□ -1.48
CALCOCO2-216	ENST00000509784	EIF4G2	P78344	907 aa	Known RBP eCLIP	5.79	□□□□□ -1.48
CALCOCO2-216	ENST00000509784	KCNH2	Q12809	1159 aa		5.79	□□□□□ -1.48
CALCOCO2-216	ENST00000509784	NR1H3	Q13133	447 aa		5.79	□□□□□ -1.48
CALCOCO2-216	ENST00000509784	TJAP1	Q5JTD0	557 aa		5.79	□□□□□ -1.48
CALCOCO2-216	ENST00000509784	IL21	Q9HBE4	155 aa		5.79	□□□□□ -1.48
CALCOCO2-216	ENST00000509784	PDIA4	P13667	645 aa	Known RBP	5.78	□□□□□ -1.48
CALCOCO2-216	ENST00000509784	PPP1R12C	Q9BZL4	782 aa		5.78	□□□□□ -1.48
CALCOCO2-216	ENST00000509784	SLC6A16	Q9GZN6	736 aa		5.78	□□□□□ -1.48
CALCOCO2-216	ENST00000509784	MYT1L	Q9UL68	1186 aa		5.78	□□□□□ -1.48
CALCOCO2-216	ENST00000509784	ZC3H4	Q9UPT8	1303 aa	Known RBP	5.77	□□□□□ -1.49
CALCOCO2-216	ENST00000509784	PALM3	A6NDB9	673 aa	Predicted RBP	5.77	□□□□□ -1.49
CALCOCO2-216	ENST00000509784	CFAP70	Q5T0N1	1121 aa		5.77	□□□□□ -1.49
CALCOCO2-216	ENST00000509784	ARMC2	Q8NEN0	867 aa		5.77	□□□□□ -1.49
CALCOCO2-216	ENST00000509784	NKX2-3	Q8TAU0	364 aa		5.77	□□□□□ -1.49
CALCOCO2-216	ENST00000509784	UCN2	Q96RP3	112 aa		5.77	□□□□□ -1.49
CALCOCO2-216	ENST00000509784	TFIP11	Q9UBB9	837 aa	Known RBP	5.77	□□□□□ -1.49
CALCOCO2-216	ENST00000509784	ACIN1	Q9UKV3	1341 aa	Known RBP	5.76	□□□□□ -1.49
CALCOCO2-216	ENST00000509784	TRBV21OR9-2	A0A075B6F4	123 aa	Predicted RBP	5.76	□□□□□ -1.49
CALCOCO2-216	ENST00000509784	PPP1R15A	O75807	674 aa	Predicted RBP	5.76	□□□□□ -1.49
CALCOCO2-216	ENST00000509784	LMOD1	P29536	600 aa	Predicted RBP	5.76	□□□□□ -1.49
CALCOCO2-216	ENST00000509784	PTK2	Q05397	1052 aa		5.76	□□□□□ -1.49
CALCOCO2-216	ENST00000509784	PTCRA	Q6ISU1	281 aa	Predicted RBP	5.76	□□□□□ -1.49
CALCOCO2-216	ENST00000509784	UNC93B1	Q9H1C4	597 aa		5.76	□□□□□ -1.49
CALCOCO2-216	ENST00000509784	S1PR4	O95977	384 aa		5.75	□□□□□ -1.49
CALCOCO2-216	ENST00000509784	NBPF14	Q5TI25	921 aa		5.75	□□□□□ -1.49
CALCOCO2-216	ENST00000509784	PDXDC2P	Q6P474	469 aa		5.75	□□□□□ -1.49
CALCOCO2-216	ENST00000509784	RETREG2	Q8NC44	543 aa		5.75	□□□□□ -1.49
CALCOCO2-216	ENST00000509784	PBXIP1	Q96AQ6	731 aa		5.75	□□□□□ -1.49
CALCOCO2-216	ENST00000509784	TRIM26	Q12899	539 aa	Predicted RBP	5.74	□□□□□ -1.49
CALCOCO2-216	ENST00000509784	TBC1D9	Q6ZT07	1266 aa		5.74	□□□□□ -1.49
CALCOCO2-216	ENST00000509784	GPKOW	Q92917	476 aa	Predicted RBP eCLIP	5.74	□□□□□ -1.49
CALCOCO2-216	ENST00000509784	OCSTAMP	Q9BR26	566 aa		5.74	□□□□□ -1.49
CALCOCO2-216	ENST00000509784	ARHGAP9	Q9BRR9	750 aa		5.74	□□□□□ -1.49
CALCOCO2-216	ENST00000509784	GPSM3	Q9Y4H4	160 aa		5.74	□□□□□ -1.49
CALCOCO2-216	ENST00000509784	PIK3CD	O00329	1044 aa		5.73	□□□□□ -1.49
CALCOCO2-216	ENST00000509784	CDCA8	Q53HL2	280 aa		5.73	□□□□□ -1.49
CALCOCO2-216	ENST00000509784	BAP1	Q92560	729 aa		5.73	□□□□□ -1.49
CALCOCO2-216	ENST00000509784	FCF1	Q9Y324	198 aa	Known RBP	5.73	□□□□□ -1.49
CALCOCO2-216	ENST00000509784	PCDHB9	Q9Y5E1	797 aa		5.73	□□□□□ -1.49
CALCOCO2-216	ENST00000509784	ATP9B	O43861	1147 aa		5.72	□□□□□ -1.49
CALCOCO2-216	ENST00000509784	SRPK2	P78362	688 aa	Known RBP	5.72	□□□□□ -1.49
CALCOCO2-216	ENST00000509784	LINC01559	Q495D7	138 aa		5.72	□□□□□ -1.49
CALCOCO2-216	ENST00000509784	ZBTB33	Q86T24	672 aa		5.72	□□□□□ -1.49
CALCOCO2-216	ENST00000509784	ADAM32	Q8TC27	787 aa		5.72	□□□□□ -1.49
CALCOCO2-216	ENST00000509784	CARD14	Q9BXL6	1004 aa		5.72	□□□□□ -1.49
CALCOCO2-216	ENST00000509784	MAFB	Q9Y5Q3	323 aa	Predicted RBP	5.72	□□□□□ -1.49
CALCOCO2-216	ENST00000509784	MAGEB6P1	A0A0J9YX57	407 aa		5.71	□□□□□ -1.5
CALCOCO2-216	ENST00000509784	PPEF1	O14829	653 aa	Predicted RBP	5.71	□□□□□ -1.5
CALCOCO2-216	ENST00000509784	SKI	P12755	728 aa		5.71	□□□□□ -1.5
CALCOCO2-216	ENST00000509784	AGER	Q15109	404 aa		5.71	□□□□□ -1.5
CALCOCO2-216	ENST00000509784	CEP126	Q9P2H0	1117 aa		5.71	□□□□□ -1.5
CALCOCO2-216	ENST00000509784	HCST	Q9UBK5	93 aa		5.71	□□□□□ -1.5
CALCOCO2-216	ENST00000509784	KCNC4	Q03721	635 aa		5.7	□□□□□ -1.5
CALCOCO2-216	ENST00000509784	SLFNL1	Q499Z3	407 aa		5.7	□□□□□ -1.5
CALCOCO2-216	ENST00000509784	SH3BP5L	Q7L8J4	393 aa		5.7	□□□□□ -1.5
CALCOCO2-216	ENST00000509784	DZIP3	Q86Y13	1208 aa	Known RBP	5.7	□□□□□ -1.5
CALCOCO2-216	ENST00000509784	FAM174A	Q8TBP5	190 aa		5.7	□□□□□ -1.5
CALCOCO2-216	ENST00000509784	ZNF592	Q92610	1267 aa		5.7	□□□□□ -1.5
CALCOCO2-216	ENST00000509784	FOXJ1	Q92949	421 aa		5.7	□□□□□ -1.5
CALCOCO2-216	ENST00000509784	TRAIP	Q9BWF2	469 aa		5.7	□□□□□ -1.5
CALCOCO2-216	ENST00000509784	PODXL2	Q9NZ53	605 aa		5.7	□□□□□ -1.5
CALCOCO2-216	ENST00000509784	CSB-PGBD3	P0DP91	1061 aa		5.69	□□□□□ -1.5
CALCOCO2-216	ENST00000509784	MCCD1	P59942	119 aa	Predicted RBP	5.69	□□□□□ -1.5
CALCOCO2-216	ENST00000509784	DEPDC4	Q8N2C3	294 aa		5.69	□□□□□ -1.5
CALCOCO2-216	ENST00000509784	ZNF511	Q8NB15	262 aa		5.69	□□□□□ -1.5
CALCOCO2-216	ENST00000509784	NFATC2IP	Q8NCF5	419 aa		5.69	□□□□□ -1.5
CALCOCO2-216	ENST00000509784	RNF166	Q96A37	237 aa	Predicted RBP	5.69	□□□□□ -1.5
CALCOCO2-216	ENST00000509784	ZBTB7C	A1YPR0	619 aa		5.68	□□□□□ -1.5
CALCOCO2-216	ENST00000509784	USP17L3	A6NCW0	530 aa		5.68	□□□□□ -1.5
CALCOCO2-216	ENST00000509784	USP17L4	A6NCW7	530 aa		5.68	□□□□□ -1.5
CALCOCO2-216	ENST00000509784	USP17L5	A8MUK1	530 aa		5.68	□□□□□ -1.5
CALCOCO2-216	ENST00000509784	ITGBL1	O95965	494 aa	Predicted RBP	5.68	□□□□□ -1.5
CALCOCO2-216	ENST00000509784	USP17L2	Q6R6M4	530 aa		5.68	□□□□□ -1.5
CALCOCO2-216	ENST00000509784	USP17L1	Q7RTZ2	530 aa		5.68	□□□□□ -1.5
CALCOCO2-216	ENST00000509784	BPHL	Q86WA6	291 aa	Predicted RBP	5.68	□□□□□ -1.5
CALCOCO2-216	ENST00000509784	RNF135	Q8IUD6	432 aa		5.68	□□□□□ -1.5
CALCOCO2-216	ENST00000509784	AEBP1	Q8IUX7	1158 aa		5.68	□□□□□ -1.5
CALCOCO2-216	ENST00000509784	VRTN	Q9H8Y1	702 aa		5.68	□□□□□ -1.5
CALCOCO2-216	ENST00000509784	CARNS1	A5YM72	827 aa		5.67	□□□□□ -1.5
CALCOCO2-216	ENST00000509784	RNF223	E7ERA6	249 aa		5.67	□□□□□ -1.5
CALCOCO2-216	ENST00000509784	ZBTB24	O43167	697 aa	Predicted RBP	5.67	□□□□□ -1.5
CALCOCO2-216	ENST00000509784	PDE4C	Q08493	712 aa		5.67	□□□□□ -1.5
CALCOCO2-216	ENST00000509784	ERFE	Q4G0M1	354 aa		5.67	□□□□□ -1.5
CALCOCO2-216	ENST00000509784	C4orf48	Q5BLP8	95 aa		5.67	□□□□□ -1.5
CALCOCO2-216	ENST00000509784	KANK4	Q5T7N3	995 aa	Predicted RBP	5.67	□□□□□ -1.5
CALCOCO2-216	ENST00000509784	SH3RF1	Q7Z6J0	888 aa		5.67	□□□□□ -1.5
CALCOCO2-216	ENST00000509784	SPNS2	Q8IVW8	549 aa		5.67	□□□□□ -1.5
CALCOCO2-216	ENST00000509784	PHTF2	Q8N3S3	785 aa		5.67	□□□□□ -1.5
CALCOCO2-216	ENST00000509784	ATG7	O95352	703 aa		5.66	□□□□□ -1.5
CALCOCO2-216	ENST00000509784	GGCX	P38435	758 aa		5.66	□□□□□ -1.5
CALCOCO2-216	ENST00000509784	SH3BP2	P78314	561 aa		5.66	□□□□□ -1.5
CALCOCO2-216	ENST00000509784	TSGA10IP	Q3SY00	556 aa		5.66	□□□□□ -1.5

Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms