RNA–Protein interactions for RNA: ENST00000509654.5

LINC00504-203, long intergenic non-protein coding RNA 504, humanhuman

TSL 1 (best)

Gene LINC00504, Length 822 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00504-203ENST00000509654 V9GY48 417 aaPredicted RBP9.64□□□□□ -0.87
LINC00504-203ENST00000509654 PDE4CQ08493 712 aa9.63□□□□□ -0.87
LINC00504-203ENST00000509654 PDZRN3Q9UPQ7 1066 aa9.63□□□□□ -0.87
LINC00504-203ENST00000509654 RFX1P22670 979 aa9.62□□□□□ -0.87
LINC00504-203ENST00000509654 ATP6V1AP38606 617 aa9.62□□□□□ -0.87
LINC00504-203ENST00000509654 HDGFP51858 240 aaKnown RBP9.62□□□□□ -0.87
LINC00504-203ENST00000509654 PPP1R18Q6NYC8 613 aa9.62□□□□□ -0.87
LINC00504-203ENST00000509654 NKX2-3Q8TAU0 364 aa9.62□□□□□ -0.87
LINC00504-203ENST00000509654 SYMPKQ92797 1274 aaKnown RBP9.62□□□□□ -0.87
LINC00504-203ENST00000509654 UCN2Q96RP3 112 aa9.62□□□□□ -0.87
LINC00504-203ENST00000509654 IL21Q9HBE4 155 aa9.62□□□□□ -0.87
LINC00504-203ENST00000509654 SLC4A3P48751 1232 aa9.61□□□□□ -0.87
LINC00504-203ENST00000509654 PRR7Q8TB68 274 aa9.61□□□□□ -0.87
LINC00504-203ENST00000509654 USTQ9Y2C2 406 aa9.61□□□□□ -0.87
LINC00504-203ENST00000509654 PALM3A6NDB9 673 aaPredicted RBP9.6□□□□□ -0.87
LINC00504-203ENST00000509654 PER1O15534 1290 aaPredicted RBP9.6□□□□□ -0.87
LINC00504-203ENST00000509654 COPS2P61201 443 aa9.6□□□□□ -0.87
LINC00504-203ENST00000509654 TREML4Q6UXN2 200 aa9.6□□□□□ -0.87
LINC00504-203ENST00000509654 SOX11P35716 441 aa9.59□□□□□ -0.87
LINC00504-203ENST00000509654 NR6A1Q15406 480 aa9.59□□□□□ -0.87
LINC00504-203ENST00000509654 LCE2AQ5TA79 106 aaPredicted RBP9.59□□□□□ -0.87
LINC00504-203ENST00000509654 RETREG3Q86VR2 466 aa9.58□□□□□ -0.88
LINC00504-203ENST00000509654 MORN1Q5T089 497 aa9.57□□□□□ -0.88
LINC00504-203ENST00000509654 DESI1Q6ICB0 168 aa9.57□□□□□ -0.88
LINC00504-203ENST00000509654 GZF1Q9H116 711 aaPredicted RBP9.57□□□□□ -0.88
LINC00504-203ENST00000509654 KMT5BQ4FZB7 885 aa9.56□□□□□ -0.88
LINC00504-203ENST00000509654 TMCO4Q5TGY1 634 aa9.56□□□□□ -0.88
LINC00504-203ENST00000509654 BRD1O95696 1058 aa9.55□□□□□ -0.88
LINC00504-203ENST00000509654 CSB-PGBD3P0DP91 1061 aa9.55□□□□□ -0.88
LINC00504-203ENST00000509654 LMOD1P29536 600 aaPredicted RBP9.55□□□□□ -0.88
LINC00504-203ENST00000509654 EIF4ENIF1Q9NRA8 985 aaKnown RBP9.55□□□□□ -0.88
LINC00504-203ENST00000509654 TFIP11Q9UBB9 837 aaKnown RBP9.55□□□□□ -0.88
LINC00504-203ENST00000509654 ACTN4O43707 911 aaKnown RBP9.54□□□□□ -0.88
LINC00504-203ENST00000509654 KCNA1Q09470 495 aa9.54□□□□□ -0.88
LINC00504-203ENST00000509654 RGS22Q8NE09 1264 aa9.54□□□□□ -0.88
LINC00504-203ENST00000509654 STK17AQ9UEE5 414 aa9.54□□□□□ -0.88
LINC00504-203ENST00000509654 SLC27A5Q9Y2P5 690 aa9.54□□□□□ -0.88
LINC00504-203ENST00000509654 MAFBQ9Y5Q3 323 aaPredicted RBP9.54□□□□□ -0.88
LINC00504-203ENST00000509654 POTECB2RU33 542 aa9.53□□□□□ -0.88
LINC00504-203ENST00000509654 PATL2C9JE40 543 aaKnown RBP9.53□□□□□ -0.88
LINC00504-203ENST00000509654 CARNS1A5YM72 827 aa9.52□□□□□ -0.89
LINC00504-203ENST00000509654 ATG7O95352 703 aa9.52□□□□□ -0.89
LINC00504-203ENST00000509654 MFAP1P55081 439 aaKnown RBP9.52□□□□□ -0.89
LINC00504-203ENST00000509654 SEMA3FQ13275 785 aa9.52□□□□□ -0.89
LINC00504-203ENST00000509654 Q3C1V9 767 aa9.52□□□□□ -0.89
LINC00504-203ENST00000509654 PUS10Q3MIT2 529 aaKnown RBP9.52□□□□□ -0.89
LINC00504-203ENST00000509654 LYPD8Q6UX82 237 aa9.52□□□□□ -0.89
LINC00504-203ENST00000509654 TBC1D9Q6ZT07 1266 aa9.51□□□□□ -0.89
LINC00504-203ENST00000509654 TMEM88BA6NKF7 163 aa9.5□□□□□ -0.89
LINC00504-203ENST00000509654 NR1H3Q13133 447 aa9.5□□□□□ -0.89
LINC00504-203ENST00000509654 RNF19BQ6ZMZ0 732 aa9.5□□□□□ -0.89
LINC00504-203ENST00000509654 PNMA1Q8ND90 353 aa9.5□□□□□ -0.89
LINC00504-203ENST00000509654 EIF4G2P78344 907 aaKnown RBP eCLIP9.49□□□□□ -0.89
LINC00504-203ENST00000509654 ATP9BO43861 1147 aa9.48□□□□□ -0.89
LINC00504-203ENST00000509654 TLL1O43897 1013 aa9.48□□□□□ -0.89
LINC00504-203ENST00000509654 F12P00748 615 aaPredicted RBP9.48□□□□□ -0.89
LINC00504-203ENST00000509654 FBXO45P0C2W1 286 aa9.48□□□□□ -0.89
LINC00504-203ENST00000509654 BLOC1S3Q6QNY0 202 aa9.48□□□□□ -0.89
LINC00504-203ENST00000509654 ZPR1O75312 459 aa9.47□□□□□ -0.89
LINC00504-203ENST00000509654 CDCA8Q53HL2 280 aa9.47□□□□□ -0.89
LINC00504-203ENST00000509654 MTMR7Q9Y216 660 aa9.47□□□□□ -0.89
LINC00504-203ENST00000509654 SALL2Q9Y467 1007 aaPredicted RBP9.47□□□□□ -0.89
LINC00504-203ENST00000509654 PCDHB3Q9Y5E6 796 aa9.47□□□□□ -0.89
LINC00504-203ENST00000509654 MYT1Q01538 1121 aa9.46□□□□□ -0.9
LINC00504-203ENST00000509654 BRICD5Q6PL45 260 aa9.46□□□□□ -0.9
LINC00504-203ENST00000509654 USB1Q9BQ65 265 aaKnown RBP9.46□□□□□ -0.9
LINC00504-203ENST00000509654 PRR14Q9BWN1 585 aa9.46□□□□□ -0.9
LINC00504-203ENST00000509654 ZBBXA8MT70 800 aa9.45□□□□□ -0.9
LINC00504-203ENST00000509654 VRTNQ9H8Y1 702 aa9.45□□□□□ -0.9
LINC00504-203ENST00000509654 FKBPLQ9UIM3 349 aa9.45□□□□□ -0.9
LINC00504-203ENST00000509654 PIK3CDO00329 1044 aa9.44□□□□□ -0.9
LINC00504-203ENST00000509654 KANK4Q5T7N3 995 aaPredicted RBP9.44□□□□□ -0.9
LINC00504-203ENST00000509654 EMID1Q96A84 441 aaPredicted RBP9.44□□□□□ -0.9
LINC00504-203ENST00000509654 THAP11Q96EK4 314 aa9.44□□□□□ -0.9
LINC00504-203ENST00000509654 ZC3H4Q9UPT8 1303 aaKnown RBP9.44□□□□□ -0.9
LINC00504-203ENST00000509654 PPEF1O14829 653 aaPredicted RBP9.43□□□□□ -0.9
LINC00504-203ENST00000509654 GGCXP38435 758 aa9.43□□□□□ -0.9
LINC00504-203ENST00000509654 PKDCCQ504Y2 493 aa9.43□□□□□ -0.9
LINC00504-203ENST00000509654 NFATC2IPQ8NCF5 419 aa9.43□□□□□ -0.9
LINC00504-203ENST00000509654 RNF223E7ERA6 249 aa9.42□□□□□ -0.9
LINC00504-203ENST00000509654 JUNDP17535 347 aa9.42□□□□□ -0.9
LINC00504-203ENST00000509654 ELOAQ14241 798 aaKnown RBP9.42□□□□□ -0.9
LINC00504-203ENST00000509654 PTPRNQ16849 979 aa9.42□□□□□ -0.9
LINC00504-203ENST00000509654 MAP10Q9P2G4 905 aa9.42□□□□□ -0.9
LINC00504-203ENST00000509654 IVNS1ABPQ9Y6Y0 642 aa9.42□□□□□ -0.9
LINC00504-203ENST00000509654 SCUBE3Q8IX30 993 aa9.41□□□□□ -0.9
LINC00504-203ENST00000509654 ZMIZ1Q9ULJ6 1067 aa9.41□□□□□ -0.9
LINC00504-203ENST00000509654 DGAT1O75907 488 aa9.4□□□□□ -0.9
LINC00504-203ENST00000509654 USP17L3A6NCW0 530 aa9.39□□□□□ -0.91
LINC00504-203ENST00000509654 USP17L4A6NCW7 530 aa9.39□□□□□ -0.91
LINC00504-203ENST00000509654 FMNL1O95466 1100 aaPredicted RBP9.39□□□□□ -0.91
LINC00504-203ENST00000509654 INSM1Q01101 510 aaPredicted RBP9.39□□□□□ -0.91
LINC00504-203ENST00000509654 FOXD4L5Q5VV16 416 aaPredicted RBP9.39□□□□□ -0.91
LINC00504-203ENST00000509654 USP17L2Q6R6M4 530 aa9.39□□□□□ -0.91
LINC00504-203ENST00000509654 TRIM67Q6ZTA4 783 aa9.39□□□□□ -0.91
LINC00504-203ENST00000509654 USP17L1Q7RTZ2 530 aa9.39□□□□□ -0.91
LINC00504-203ENST00000509654 PLEKHM2Q8IWE5 1019 aa9.39□□□□□ -0.91
LINC00504-203ENST00000509654 FAM174AQ8TBP5 190 aa9.39□□□□□ -0.91
LINC00504-203ENST00000509654 FOXD4L4Q8WXT5 416 aaPredicted RBP9.39□□□□□ -0.91
LINC00504-203ENST00000509654 USP17L5A8MUK1 530 aa9.38□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms