RNA–Protein interactions for RNA: ENST00000509368.6

PDE4D-218, Transcript of phosphodiesterase 4D, humanhuman

TSL 1 (best)

Gene PDE4D, Length 2,809 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE4D-218ENST00000509368 TJAP1Q5JTD0 557 aa3.73□□□□□ -1.81
PDE4D-218ENST00000509368 ZNF777Q9ULD5 760 aaPredicted RBP3.73□□□□□ -1.81
PDE4D-218ENST00000509368 SLC27A5Q9Y2P5 690 aa3.73□□□□□ -1.81
PDE4D-218ENST00000509368 RIC3Q7Z5B4 369 aa3.73□□□□□ -1.81
PDE4D-218ENST00000509368 ZNF516Q92618 1163 aa3.73□□□□□ -1.81
PDE4D-218ENST00000509368 PRDM9Q9NQV7 894 aa3.73□□□□□ -1.81
PDE4D-218ENST00000509368 CFAP99D6REC4 459 aa3.72□□□□□ -1.81
PDE4D-218ENST00000509368 AVPP01185 164 aa3.72□□□□□ -1.81
PDE4D-218ENST00000509368 SULF1Q8IWU6 871 aa3.72□□□□□ -1.81
PDE4D-218ENST00000509368 POM121Q96HA1 1249 aa3.72□□□□□ -1.81
PDE4D-218ENST00000509368 HMX1Q9NP08 348 aaPredicted RBP3.72□□□□□ -1.81
PDE4D-218ENST00000509368 ZNF330Q9Y3S2 320 aaPredicted RBP3.72□□□□□ -1.81
PDE4D-218ENST00000509368 PER1O15534 1290 aaPredicted RBP3.72□□□□□ -1.81
PDE4D-218ENST00000509368 EPS8L1Q8TE68 723 aa3.72□□□□□ -1.81
PDE4D-218ENST00000509368 SNRKQ9NRH2 765 aa3.72□□□□□ -1.81
PDE4D-218ENST00000509368 AMOTL2Q9Y2J4 779 aa3.72□□□□□ -1.81
PDE4D-218ENST00000509368 BRD1O95696 1058 aa3.71□□□□□ -1.81
PDE4D-218ENST00000509368 MORN1Q5T089 497 aa3.71□□□□□ -1.81
PDE4D-218ENST00000509368 NUTM1Q86Y26 1132 aa3.71□□□□□ -1.81
PDE4D-218ENST00000509368 NKX2-3Q8TAU0 364 aa3.71□□□□□ -1.81
PDE4D-218ENST00000509368 ATP1B4Q9UN42 357 aaPredicted RBP3.71□□□□□ -1.81
PDE4D-218ENST00000509368 FDX1P10109 184 aa3.71□□□□□ -1.82
PDE4D-218ENST00000509368 RFC5P40937 340 aa3.71□□□□□ -1.82
PDE4D-218ENST00000509368 SLC19A1P41440 591 aa3.71□□□□□ -1.82
PDE4D-218ENST00000509368 SLF2Q8IX21 1173 aa3.71□□□□□ -1.82
PDE4D-218ENST00000509368 SPTLC1O15269 473 aa3.71□□□□□ -1.82
PDE4D-218ENST00000509368 PPP4CP60510 307 aa3.71□□□□□ -1.82
PDE4D-218ENST00000509368 RETREG2Q8NC44 543 aa3.71□□□□□ -1.82
PDE4D-218ENST00000509368 CTDSPL2Q05D32 466 aa3.7□□□□□ -1.82
PDE4D-218ENST00000509368 SCUBE3Q8IX30 993 aa3.7□□□□□ -1.82
PDE4D-218ENST00000509368 IRF7Q92985 503 aa3.7□□□□□ -1.82
PDE4D-218ENST00000509368 GPR37L1O60883 481 aa3.7□□□□□ -1.82
PDE4D-218ENST00000509368 LILRB3O75022 631 aa3.7□□□□□ -1.82
PDE4D-218ENST00000509368 LCE3BQ5TA77 95 aa3.7□□□□□ -1.82
PDE4D-218ENST00000509368 LRRN4Q8WUT4 740 aa3.7□□□□□ -1.82
PDE4D-218ENST00000509368 TSC1Q92574 1164 aa3.7□□□□□ -1.82
PDE4D-218ENST00000509368 ACTN4O43707 911 aaKnown RBP3.69□□□□□ -1.82
PDE4D-218ENST00000509368 MFAP1P55081 439 aaKnown RBP3.69□□□□□ -1.82
PDE4D-218ENST00000509368 WASHC4Q2M389 1173 aa3.69□□□□□ -1.82
PDE4D-218ENST00000509368 MTMR14Q8NCE2 650 aa3.69□□□□□ -1.82
PDE4D-218ENST00000509368 THAP11Q96EK4 314 aa3.69□□□□□ -1.82
PDE4D-218ENST00000509368 C6orf229H3BNL8 230 aa3.69□□□□□ -1.82
PDE4D-218ENST00000509368 GDF11O95390 407 aa3.69□□□□□ -1.82
PDE4D-218ENST00000509368 ATP6V1AP38606 617 aa3.69□□□□□ -1.82
PDE4D-218ENST00000509368 AEBP1Q8IUX7 1158 aa3.69□□□□□ -1.82
PDE4D-218ENST00000509368 PBXIP1Q96AQ6 731 aa3.69□□□□□ -1.82
PDE4D-218ENST00000509368 MTRQ99707 1265 aa3.69□□□□□ -1.82
PDE4D-218ENST00000509368 HDGFP51858 240 aaKnown RBP3.68□□□□□ -1.82
PDE4D-218ENST00000509368 TRIM67Q6ZTA4 783 aa3.68□□□□□ -1.82
PDE4D-218ENST00000509368 PCDHB3Q9Y5E6 796 aa3.68□□□□□ -1.82
PDE4D-218ENST00000509368 FAM160A2Q8N612 972 aaPredicted RBP3.68□□□□□ -1.82
PDE4D-218ENST00000509368 CALR3Q96L12 384 aaKnown RBP3.68□□□□□ -1.82
PDE4D-218ENST00000509368 GZF1Q9H116 711 aaPredicted RBP3.68□□□□□ -1.82
PDE4D-218ENST00000509368 AP1G2O75843 785 aa3.67□□□□□ -1.82
PDE4D-218ENST00000509368 PRPF38BQ5VTL8 546 aaKnown RBP3.67□□□□□ -1.82
PDE4D-218ENST00000509368 SPRYD7Q5W111 196 aa3.67□□□□□ -1.82
PDE4D-218ENST00000509368 DNMT3AQ9Y6K1 912 aaPredicted RBP3.67□□□□□ -1.82
PDE4D-218ENST00000509368 SHROOM4Q9ULL8 1493 aa3.67□□□□□ -1.82
PDE4D-218ENST00000509368 KRTAP4-8A0A0G2JLE6 195 aa3.67□□□□□ -1.82
PDE4D-218ENST00000509368 NUTM2BA6NNL0 878 aaPredicted RBP3.67□□□□□ -1.82
PDE4D-218ENST00000509368 NUTM2EB1AL46 878 aaPredicted RBP3.67□□□□□ -1.82
PDE4D-218ENST00000509368 PPEF1O14829 653 aaPredicted RBP3.67□□□□□ -1.82
PDE4D-218ENST00000509368 LORP23490 312 aaPredicted RBP3.67□□□□□ -1.82
PDE4D-218ENST00000509368 IRF5Q13568 498 aa3.67□□□□□ -1.82
PDE4D-218ENST00000509368 MTMR2Q13614 643 aa3.67□□□□□ -1.82
PDE4D-218ENST00000509368 NUTM2DQ5VT03 806 aaPredicted RBP3.67□□□□□ -1.82
PDE4D-218ENST00000509368 NUTM2AQ8IVF1 878 aaPredicted RBP3.67□□□□□ -1.82
PDE4D-218ENST00000509368 AXIN1O15169 862 aa3.66□□□□□ -1.82
PDE4D-218ENST00000509368 SOX11P35716 441 aa3.66□□□□□ -1.82
PDE4D-218ENST00000509368 B4GALNT3Q6L9W6 998 aa3.66□□□□□ -1.82
PDE4D-218ENST00000509368 PRR7Q8TB68 274 aa3.66□□□□□ -1.82
PDE4D-218ENST00000509368 GJD4Q96KN9 370 aaPredicted RBP3.66□□□□□ -1.82
PDE4D-218ENST00000509368 E9PSI1 815 aa3.66□□□□□ -1.82
PDE4D-218ENST00000509368 USP17L8P0C7I0 530 aa3.66□□□□□ -1.82
PDE4D-218ENST00000509368 CSB-PGBD3P0DP91 1061 aa3.66□□□□□ -1.82
PDE4D-218ENST00000509368 BRICD5Q6PL45 260 aa3.66□□□□□ -1.82
PDE4D-218ENST00000509368 TRIM34Q9BYJ4 488 aa3.66□□□□□ -1.82
PDE4D-218ENST00000509368 MAP10Q9P2G4 905 aa3.66□□□□□ -1.82
PDE4D-218ENST00000509368 TBC1D2BQ9UPU7 963 aa3.66□□□□□ -1.82
PDE4D-218ENST00000509368 RASSF7Q02833 373 aa3.66□□□□□ -1.82
PDE4D-218ENST00000509368 PLA2G2CQ5R387 149 aa3.66□□□□□ -1.82
PDE4D-218ENST00000509368 MTMR7Q9Y216 660 aa3.66□□□□□ -1.82
PDE4D-218ENST00000509368 GDF9O60383 454 aa3.65□□□□□ -1.82
PDE4D-218ENST00000509368 ERCC3P19447 782 aa3.65□□□□□ -1.82
PDE4D-218ENST00000509368 KMT5BQ4FZB7 885 aa3.65□□□□□ -1.82
PDE4D-218ENST00000509368 GLMNQ92990 594 aa3.65□□□□□ -1.82
PDE4D-218ENST00000509368 ZBTB3Q9H5J0 574 aa3.65□□□□□ -1.82
PDE4D-218ENST00000509368 GDPD2Q9HCC8 539 aa3.65□□□□□ -1.82
PDE4D-218ENST00000509368 GMPR2Q9P2T1 348 aaKnown RBP3.65□□□□□ -1.82
PDE4D-218ENST00000509368 NDUFB9Q9Y6M9 179 aa3.65□□□□□ -1.82
PDE4D-218ENST00000509368 ZPR1O75312 459 aa3.65□□□□□ -1.83
PDE4D-218ENST00000509368 S1PR4O95977 384 aa3.64□□□□□ -1.83
PDE4D-218ENST00000509368 USP46P62068 366 aa3.64□□□□□ -1.83
PDE4D-218ENST00000509368 NR6A1Q15406 480 aa3.64□□□□□ -1.83
PDE4D-218ENST00000509368 SRPK2P78362 688 aaKnown RBP3.64□□□□□ -1.83
PDE4D-218ENST00000509368 PTCRAQ6ISU1 281 aaPredicted RBP3.64□□□□□ -1.83
PDE4D-218ENST00000509368 SPSB2Q99619 263 aa3.64□□□□□ -1.83
PDE4D-218ENST00000509368 USB1Q9BQ65 265 aaKnown RBP3.64□□□□□ -1.83
PDE4D-218ENST00000509368 GNEQ9Y223 722 aaKnown RBP3.64□□□□□ -1.83
PDE4D-218ENST00000509368 KANK3Q6NY19 840 aa3.63□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 15 ms