RNA–Protein interactions for RNA: ENST00000509234.1

TRAPPC13-210, Transcript of trafficking protein particle complex 13, humanhuman

TSL 2

Gene TRAPPC13, Length 976 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC13-210ENST00000509234 ZNF516Q92618 1163 aa8.47□□□□□ -1.05
TRAPPC13-210ENST00000509234 IL21Q9HBE4 155 aa8.47□□□□□ -1.05
TRAPPC13-210ENST00000509234 PRKD2Q9BZL6 878 aa8.46□□□□□ -1.06
TRAPPC13-210ENST00000509234 PRM3Q9NNZ6 103 aa8.46□□□□□ -1.06
TRAPPC13-210ENST00000509234 PRDM9Q9NQV7 894 aa8.46□□□□□ -1.06
TRAPPC13-210ENST00000509234 ABL2P42684 1182 aa8.44□□□□□ -1.06
TRAPPC13-210ENST00000509234 EVA1BQ9NVM1 165 aa8.44□□□□□ -1.06
TRAPPC13-210ENST00000509234 POM121CA8CG34 1229 aa8.43□□□□□ -1.06
TRAPPC13-210ENST00000509234 MAP10Q9P2G4 905 aa8.43□□□□□ -1.06
TRAPPC13-210ENST00000509234 ZNF777Q9ULD5 760 aaPredicted RBP8.43□□□□□ -1.06
TRAPPC13-210ENST00000509234 ZNF330Q9Y3S2 320 aaPredicted RBP8.43□□□□□ -1.06
TRAPPC13-210ENST00000509234 CCNYL3P0C7X3 344 aa8.42□□□□□ -1.06
TRAPPC13-210ENST00000509234 ADAMTS19Q8TE59 1207 aa8.42□□□□□ -1.06
TRAPPC13-210ENST00000509234 ZC3H4Q9UPT8 1303 aaKnown RBP8.42□□□□□ -1.06
TRAPPC13-210ENST00000509234 MYO15BQ96JP2 1530 aa8.42□□□□□ -1.06
TRAPPC13-210ENST00000509234 KCNH2Q12809 1159 aa8.41□□□□□ -1.06
TRAPPC13-210ENST00000509234 WASHC4Q2M389 1173 aa8.41□□□□□ -1.06
TRAPPC13-210ENST00000509234 ARXQ96QS3 562 aa8.41□□□□□ -1.06
TRAPPC13-210ENST00000509234 NUDT12Q9BQG2 462 aa8.41□□□□□ -1.06
TRAPPC13-210ENST00000509234 CCDC82Q8N4S0 544 aa8.4□□□□□ -1.06
TRAPPC13-210ENST00000509234 NKX2-3Q8TAU0 364 aa8.4□□□□□ -1.06
TRAPPC13-210ENST00000509234 SLC6A16Q9GZN6 736 aa8.4□□□□□ -1.06
TRAPPC13-210ENST00000509234 FKBPLQ9UIM3 349 aa8.4□□□□□ -1.06
TRAPPC13-210ENST00000509234 WWC1Q8IX03 1113 aa8.39□□□□□ -1.07
TRAPPC13-210ENST00000509234 OCSTAMPQ9BR26 566 aa8.38□□□□□ -1.07
TRAPPC13-210ENST00000509234 ALG2Q9H553 416 aa8.38□□□□□ -1.07
TRAPPC13-210ENST00000509234 PDZRN3Q9UPQ7 1066 aa8.38□□□□□ -1.07
TRAPPC13-210ENST00000509234 UNC13AQ9UPW8 1703 aa8.37□□□□□ -1.07
TRAPPC13-210ENST00000509234 VAC14Q08AM6 782 aa8.37□□□□□ -1.07
TRAPPC13-210ENST00000509234 PTCRAQ6ISU1 281 aaPredicted RBP8.37□□□□□ -1.07
TRAPPC13-210ENST00000509234 GPKOWQ92917 476 aaPredicted RBP eCLIP8.37□□□□□ -1.07
TRAPPC13-210ENST00000509234 GLMNQ92990 594 aa8.37□□□□□ -1.07
TRAPPC13-210ENST00000509234 S1PR4O95977 384 aa8.36□□□□□ -1.07
TRAPPC13-210ENST00000509234 V9GY48 417 aaPredicted RBP8.36□□□□□ -1.07
TRAPPC13-210ENST00000509234 FBXO45P0C2W1 286 aa8.35□□□□□ -1.07
TRAPPC13-210ENST00000509234 SOX11P35716 441 aa8.35□□□□□ -1.07
TRAPPC13-210ENST00000509234 NR1H3Q13133 447 aa8.35□□□□□ -1.07
TRAPPC13-210ENST00000509234 PDXDC2PQ6P474 469 aa8.35□□□□□ -1.07
TRAPPC13-210ENST00000509234 SERPINA10Q9UK55 444 aa8.35□□□□□ -1.07
TRAPPC13-210ENST00000509234 GPSM3Q9Y4H4 160 aa8.35□□□□□ -1.07
TRAPPC13-210ENST00000509234 ZBBXA8MT70 800 aa8.34□□□□□ -1.07
TRAPPC13-210ENST00000509234 PPP1R18Q6NYC8 613 aa8.34□□□□□ -1.07
TRAPPC13-210ENST00000509234 PNMA1Q8ND90 353 aa8.34□□□□□ -1.07
TRAPPC13-210ENST00000509234 UNC93B1Q9H1C4 597 aa8.34□□□□□ -1.07
TRAPPC13-210ENST00000509234 CTHP32929 405 aa8.33□□□□□ -1.08
TRAPPC13-210ENST00000509234 SH3BP5LQ7L8J4 393 aa8.33□□□□□ -1.08
TRAPPC13-210ENST00000509234 SH3RF1Q7Z6J0 888 aa8.33□□□□□ -1.08
TRAPPC13-210ENST00000509234 ARMC2Q8NEN0 867 aa8.33□□□□□ -1.08
TRAPPC13-210ENST00000509234 HDGFL1Q5TGJ6 251 aa8.32□□□□□ -1.08
TRAPPC13-210ENST00000509234 UCN2Q96RP3 112 aa8.32□□□□□ -1.08
TRAPPC13-210ENST00000509234 FCF1Q9Y324 198 aaKnown RBP8.32□□□□□ -1.08
TRAPPC13-210ENST00000509234 DCAF1Q9Y4B6 1507 aa8.31□□□□□ -1.08
TRAPPC13-210ENST00000509234 NBPF14Q5TI25 921 aa8.31□□□□□ -1.08
TRAPPC13-210ENST00000509234 CALR3Q96L12 384 aaKnown RBP8.31□□□□□ -1.08
TRAPPC13-210ENST00000509234 ZCCHC6Q5VYS8 1495 aaKnown RBP8.31□□□□□ -1.08
TRAPPC13-210ENST00000509234 RNF223E7ERA6 249 aa8.3□□□□□ -1.08
TRAPPC13-210ENST00000509234 BICRAQ9NZM4 1560 aa8.3□□□□□ -1.08
TRAPPC13-210ENST00000509234 SRPK2P78362 688 aaKnown RBP8.29□□□□□ -1.08
TRAPPC13-210ENST00000509234 PLA2G2CQ5R387 149 aa8.29□□□□□ -1.08
TRAPPC13-210ENST00000509234 HOMEZQ8IX15 550 aa8.29□□□□□ -1.08
TRAPPC13-210ENST00000509234 ANKLE1Q8NAG6 615 aa8.29□□□□□ -1.08
TRAPPC13-210ENST00000509234 CCDC97Q96F63 343 aaPredicted RBP8.29□□□□□ -1.08
TRAPPC13-210ENST00000509234 EIF4ENIF1Q9NRA8 985 aaKnown RBP8.29□□□□□ -1.08
TRAPPC13-210ENST00000509234 CFAP70Q5T0N1 1121 aa8.28□□□□□ -1.08
TRAPPC13-210ENST00000509234 ARID3AQ99856 593 aa8.28□□□□□ -1.08
TRAPPC13-210ENST00000509234 PPEF1O14829 653 aaPredicted RBP8.27□□□□□ -1.09
TRAPPC13-210ENST00000509234 EIF4G2P78344 907 aaKnown RBP eCLIP8.27□□□□□ -1.09
TRAPPC13-210ENST00000509234 PTK2Q05397 1052 aa8.27□□□□□ -1.09
TRAPPC13-210ENST00000509234 C4orf48Q5BLP8 95 aa8.27□□□□□ -1.09
TRAPPC13-210ENST00000509234 CCDC24Q8N4L8 307 aa8.27□□□□□ -1.09
TRAPPC13-210ENST00000509234 C1QTNF2Q9BXJ5 285 aa8.27□□□□□ -1.09
TRAPPC13-210ENST00000509234 ZNF511Q8NB15 262 aa8.26□□□□□ -1.09
TRAPPC13-210ENST00000509234 EMID1Q96A84 441 aaPredicted RBP8.26□□□□□ -1.09
TRAPPC13-210ENST00000509234 PPP1R12CQ9BZL4 782 aa8.26□□□□□ -1.09
TRAPPC13-210ENST00000509234 POTECB2RU33 542 aa8.25□□□□□ -1.09
TRAPPC13-210ENST00000509234 PHTF2Q8N3S3 785 aa8.25□□□□□ -1.09
TRAPPC13-210ENST00000509234 ADAM32Q8TC27 787 aa8.25□□□□□ -1.09
TRAPPC13-210ENST00000509234 BAP1Q92560 729 aa8.25□□□□□ -1.09
TRAPPC13-210ENST00000509234 CHIC2Q9UKJ5 165 aa8.25□□□□□ -1.09
TRAPPC13-210ENST00000509234 MCCD1P59942 119 aaPredicted RBP8.24□□□□□ -1.09
TRAPPC13-210ENST00000509234 SH3BP2P78314 561 aa8.24□□□□□ -1.09
TRAPPC13-210ENST00000509234 SEMA3FQ13275 785 aa8.24□□□□□ -1.09
TRAPPC13-210ENST00000509234 ARHGAP9Q9BRR9 750 aa8.24□□□□□ -1.09
TRAPPC13-210ENST00000509234 PALM3A6NDB9 673 aaPredicted RBP8.23□□□□□ -1.09
TRAPPC13-210ENST00000509234 NFATC2IPQ8NCF5 419 aa8.23□□□□□ -1.09
TRAPPC13-210ENST00000509234 FOXJ1Q92949 421 aa8.23□□□□□ -1.09
TRAPPC13-210ENST00000509234 RPIAP49247 311 aa8.22□□□□□ -1.09
TRAPPC13-210ENST00000509234 SKOR1P84550 965 aa8.22□□□□□ -1.09
TRAPPC13-210ENST00000509234 TRIM32Q13049 653 aa8.22□□□□□ -1.09
TRAPPC13-210ENST00000509234 ERFEQ4G0M1 354 aa8.22□□□□□ -1.09
TRAPPC13-210ENST00000509234 TREML4Q6UXN2 200 aa8.22□□□□□ -1.09
TRAPPC13-210ENST00000509234 TBC1D9Q6ZT07 1266 aa8.22□□□□□ -1.09
TRAPPC13-210ENST00000509234 TRMT44Q8IYL2 757 aaKnown RBP8.22□□□□□ -1.09
TRAPPC13-210ENST00000509234 MAFBQ9Y5Q3 323 aaPredicted RBP8.22□□□□□ -1.09
TRAPPC13-210ENST00000509234 PIK3CDO00329 1044 aa8.21□□□□□ -1.1
TRAPPC13-210ENST00000509234 PPP1R15AO75807 674 aaPredicted RBP8.21□□□□□ -1.1
TRAPPC13-210ENST00000509234 GGCXP38435 758 aa8.21□□□□□ -1.1
TRAPPC13-210ENST00000509234 LINC01559Q495D7 138 aa8.21□□□□□ -1.1
TRAPPC13-210ENST00000509234 PKDCCQ504Y2 493 aa8.21□□□□□ -1.1
TRAPPC13-210ENST00000509234 BPHLQ86WA6 291 aaPredicted RBP8.21□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms