RNA–Protein interactions for RNA: ENST00000509085.5

HMGCR-207, Transcript of 3-hydroxy-3-methylglutaryl-CoA reductase, humanhuman

TSL 1 (best)

Gene HMGCR, Length 637 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCR-207ENST00000509085 PLEKHG5O94827 1062 aa12.89□□□□□ -0.35
HMGCR-207ENST00000509085 FAM98CQ17RN3 349 aaKnown RBP12.89□□□□□ -0.35
HMGCR-207ENST00000509085 SPATA31A5Q5VU36 1347 aa12.88□□□□□ -0.35
HMGCR-207ENST00000509085 SPATA31A7Q8IWB4 1347 aa12.88□□□□□ -0.35
HMGCR-207ENST00000509085 WASLO00401 505 aaPredicted RBP12.88□□□□□ -0.35
HMGCR-207ENST00000509085 TRAK1Q9UPV9 953 aa12.88□□□□□ -0.35
HMGCR-207ENST00000509085 ATP7BP35670 1465 aa12.88□□□□□ -0.35
HMGCR-207ENST00000509085 MINK1Q8N4C8 1332 aaPredicted RBP12.88□□□□□ -0.35
HMGCR-207ENST00000509085 PRR36Q9H6K5 1346 aa12.88□□□□□ -0.35
HMGCR-207ENST00000509085 RAB3GAP2Q9H2M9 1393 aa12.87□□□□□ -0.35
HMGCR-207ENST00000509085 MSH5O43196 834 aa12.87□□□□□ -0.35
HMGCR-207ENST00000509085 NGDNQ8NEJ9 315 aaKnown RBP12.87□□□□□ -0.35
HMGCR-207ENST00000509085 ARHGEF28Q8N1W1 1705 aaKnown RBP12.87□□□□□ -0.35
HMGCR-207ENST00000509085 TNS1Q9HBL0 1735 aaKnown RBP12.87□□□□□ -0.35
HMGCR-207ENST00000509085 HIRIP3Q9BW71 556 aaPredicted RBP12.86□□□□□ -0.35
HMGCR-207ENST00000509085 PRDM11Q9NQV5 511 aa12.86□□□□□ -0.35
HMGCR-207ENST00000509085 PHRF1Q9P1Y6 1649 aaKnown RBP12.86□□□□□ -0.35
HMGCR-207ENST00000509085 PAK3O75914 559 aaPredicted RBP12.84□□□□□ -0.35
HMGCR-207ENST00000509085 HRCP23327 699 aa12.84□□□□□ -0.35
HMGCR-207ENST00000509085 PIAS4Q8N2W9 510 aaPredicted RBP12.84□□□□□ -0.35
HMGCR-207ENST00000509085 DCAF11Q8TEB1 546 aa12.84□□□□□ -0.35
HMGCR-207ENST00000509085 TOPAZ1Q8N9V7 1692 aa12.83□□□□□ -0.35
HMGCR-207ENST00000509085 PARD3Q8TEW0 1356 aa12.83□□□□□ -0.36
HMGCR-207ENST00000509085 SPATA31A1Q5TZJ5 1347 aa12.83□□□□□ -0.36
HMGCR-207ENST00000509085 KIAA0232Q92628 1395 aa12.82□□□□□ -0.36
HMGCR-207ENST00000509085 PSDA5PKW4 1024 aaPredicted RBP12.82□□□□□ -0.36
HMGCR-207ENST00000509085 EN1Q05925 392 aaPredicted RBP12.82□□□□□ -0.36
HMGCR-207ENST00000509085 KIAA1210Q9ULL0 1709 aa12.82□□□□□ -0.36
HMGCR-207ENST00000509085 FAM196AQ6ZSG2 479 aa12.81□□□□□ -0.36
HMGCR-207ENST00000509085 NUDT16Q96DE0 195 aaKnown RBP12.81□□□□□ -0.36
HMGCR-207ENST00000509085 KDM2AQ9Y2K7 1162 aa12.81□□□□□ -0.36
HMGCR-207ENST00000509085 POLR3AO14802 1390 aaPredicted RBP12.81□□□□□ -0.36
HMGCR-207ENST00000509085 ADRA2BP18089 450 aa12.8□□□□□ -0.36
HMGCR-207ENST00000509085 NRKQ7Z2Y5 1582 aa12.8□□□□□ -0.36
HMGCR-207ENST00000509085 BARGINQ6ZT62 677 aa12.79□□□□□ -0.36
HMGCR-207ENST00000509085 SSH2Q76I76 1423 aa12.79□□□□□ -0.36
HMGCR-207ENST00000509085 RREB1Q92766 1687 aa12.78□□□□□ -0.36
HMGCR-207ENST00000509085 R3HDM1Q15032 1099 aaKnown RBP12.78□□□□□ -0.36
HMGCR-207ENST00000509085 FAM182BQ5T319 152 aa12.78□□□□□ -0.36
HMGCR-207ENST00000509085 CCDC61Q9Y6R9 512 aa12.78□□□□□ -0.36
HMGCR-207ENST00000509085 CPDO75976 1380 aa12.78□□□□□ -0.36
HMGCR-207ENST00000509085 LMO7Q8WWI1 1683 aa12.77□□□□□ -0.36
HMGCR-207ENST00000509085 C11orf95C9JLR9 678 aaPredicted RBP12.77□□□□□ -0.37
HMGCR-207ENST00000509085 CAMKK2Q96RR4 588 aa12.77□□□□□ -0.37
HMGCR-207ENST00000509085 STRN4Q9NRL3 753 aa12.77□□□□□ -0.37
HMGCR-207ENST00000509085 BRD4O60885 1362 aaPredicted RBP12.77□□□□□ -0.37
HMGCR-207ENST00000509085 PLEKHG3A1L390 1219 aa12.76□□□□□ -0.37
HMGCR-207ENST00000509085 EVA1CP58658 441 aa12.76□□□□□ -0.37
HMGCR-207ENST00000509085 ZC3H6P61129 1189 aaKnown RBP12.76□□□□□ -0.37
HMGCR-207ENST00000509085 PDE3BQ13370 1112 aa12.76□□□□□ -0.37
HMGCR-207ENST00000509085 CHRNA2Q15822 529 aa12.76□□□□□ -0.37
HMGCR-207ENST00000509085 EZH2Q15910 746 aaKnown RBP12.76□□□□□ -0.37
HMGCR-207ENST00000509085 CDK19Q9BWU1 502 aa12.76□□□□□ -0.37
HMGCR-207ENST00000509085 THRAP3Q9Y2W1 955 aaKnown RBP12.76□□□□□ -0.37
HMGCR-207ENST00000509085 USP19O94966 1318 aa12.76□□□□□ -0.37
HMGCR-207ENST00000509085 ACEP12821 1306 aa12.76□□□□□ -0.37
HMGCR-207ENST00000509085 TRIM37O94972 964 aa12.75□□□□□ -0.37
HMGCR-207ENST00000509085 APBA3O96018 575 aa12.75□□□□□ -0.37
HMGCR-207ENST00000509085 NBPF8Q3BBV2 869 aa12.75□□□□□ -0.37
HMGCR-207ENST00000509085 NUP188Q5SRE5 1749 aa12.75□□□□□ -0.37
HMGCR-207ENST00000509085 PARP4Q9UKK3 1724 aaKnown RBP12.75□□□□□ -0.37
HMGCR-207ENST00000509085 CAMTA1Q9Y6Y1 1673 aa12.75□□□□□ -0.37
HMGCR-207ENST00000509085 TCP11L2Q8N4U5 519 aa12.74□□□□□ -0.37
HMGCR-207ENST00000509085 ABTB2Q8N961 1025 aa12.74□□□□□ -0.37
HMGCR-207ENST00000509085 NBPF14Q5TI25 921 aa12.73□□□□□ -0.37
HMGCR-207ENST00000509085 NLRP13Q86W25 1043 aa12.73□□□□□ -0.37
HMGCR-207ENST00000509085 USP35Q9P2H5 1018 aa12.73□□□□□ -0.37
HMGCR-207ENST00000509085 RGPD3A6NKT7 1758 aaPredicted RBP12.73□□□□□ -0.37
HMGCR-207ENST00000509085 RGPD4Q7Z3J3 1758 aa12.73□□□□□ -0.37
HMGCR-207ENST00000509085 NUTM2GQ5VZR2 741 aa12.72□□□□□ -0.37
HMGCR-207ENST00000509085 COL5A2P05997 1499 aaPredicted RBP12.72□□□□□ -0.37
HMGCR-207ENST00000509085 PPIP5K1Q6PFW1 1433 aa12.71□□□□□ -0.37
HMGCR-207ENST00000509085 LARP1Q6PKG0 1096 aaKnown RBP12.71□□□□□ -0.37
HMGCR-207ENST00000509085 CRB1P82279 1406 aa12.71□□□□□ -0.38
HMGCR-207ENST00000509085 GCP02774 474 aa12.7□□□□□ -0.38
HMGCR-207ENST00000509085 OVOS2A0A0G2JMS6 1433 aa12.7□□□□□ -0.38
HMGCR-207ENST00000509085 OVOS2A0A0J9YW53 1432 aa12.7□□□□□ -0.38
HMGCR-207ENST00000509085 OVOS2Q6IE36 1432 aa12.7□□□□□ -0.38
HMGCR-207ENST00000509085 CENPJQ9HC77 1338 aaPredicted RBP12.69□□□□□ -0.38
HMGCR-207ENST00000509085 SLIT3O75094 1523 aa12.69□□□□□ -0.38
HMGCR-207ENST00000509085 SRPK2P78362 688 aaKnown RBP12.69□□□□□ -0.38
HMGCR-207ENST00000509085 QRICH2Q9H0J4 1663 aa12.69□□□□□ -0.38
HMGCR-207ENST00000509085 PEAK1Q9H792 1746 aa12.68□□□□□ -0.38
HMGCR-207ENST00000509085 LRRC37A3O60309 1634 aa12.68□□□□□ -0.38
HMGCR-207ENST00000509085 USP6P35125 1406 aa12.68□□□□□ -0.38
HMGCR-207ENST00000509085 AATKQ6ZMQ8 1374 aa12.68□□□□□ -0.38
HMGCR-207ENST00000509085 WNK3Q9BYP7 1800 aa12.67□□□□□ -0.38
HMGCR-207ENST00000509085 NINLQ9Y2I6 1382 aa12.67□□□□□ -0.38
HMGCR-207ENST00000509085 SPON1Q9HCB6 807 aa12.66□□□□□ -0.38
HMGCR-207ENST00000509085 SBF2Q86WG5 1849 aa12.66□□□□□ -0.38
HMGCR-207ENST00000509085 BCL9O00512 1426 aa12.65□□□□□ -0.38
HMGCR-207ENST00000509085 DCAF8L1A6NGE4 600 aa12.65□□□□□ -0.38
HMGCR-207ENST00000509085 PLSCR1O15162 318 aa12.65□□□□□ -0.38
HMGCR-207ENST00000509085 CDCA7Q9BWT1 371 aaPredicted RBP12.65□□□□□ -0.38
HMGCR-207ENST00000509085 PPP1R1BQ9UD71 204 aaPredicted RBP12.65□□□□□ -0.38
HMGCR-207ENST00000509085 PIK3C2AO00443 1686 aa12.64□□□□□ -0.39
HMGCR-207ENST00000509085 AKAP12Q02952 1782 aa12.64□□□□□ -0.39
HMGCR-207ENST00000509085 TRPM1Q7Z4N2 1603 aa12.64□□□□□ -0.39
HMGCR-207ENST00000509085 KCNQ2O43526 872 aa12.64□□□□□ -0.39
HMGCR-207ENST00000509085 NLRP6P59044 892 aa12.64□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 85.5 ms